PROSITE entry PS40000

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General information about the entry

Entry name [info]	DM_1
Accession [info]	PS40000
Entry type [info]	PATTERN
Date [info]	01-DEC-2001 CREATED; 01-DEC-2001 DATA UPDATE; 13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC50809

Name and characterization of the entry

Description [info]	DM DNA-binding domain signature.
Pattern [info]	C-x(2)-C-x(2)-H-x(8)-H-x(3,4)-C-x(4)-C-x-C-x(2,3)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.

Total number of hits	48 in 45 different sequences
Number of true positive hits	48 in 45 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	1
Number of 'partial' sequences	2

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	97.96 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	2
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	45 sequences DMD10_CAEEL (G5EEJ1), DMD3_CAEEL (Q9XWN9), DMD4_CAEEL (Q18248), DMD5_CAEEL (Q19291), DMR3T_HORSE (J7FCF0), DMRT1_BOVIN (C0LZJ1), DMRT1_CHICK (Q9PTQ7), DMRT1_DANRE (Q71MM5), DMRT1_HUMAN (Q9Y5R6), DMRT1_MOUSE (Q9QZ59), DMRT1_ORYLA (Q801F8), DMRT1_PIG (Q9TT01), DMRT1_XENTR (P85119), DMRT2_HUMAN (Q9Y5R5), DMRT2_MOUSE (Q8BG36), DMRT3_HORSE (F6W2R2), DMRT3_HUMAN (Q9NQL9), DMRT3_MOUSE (Q80WT2), DMRT3_RAT (D4A218), DMRT3_TAKRU (Q90WM5), DMRTA_HUMAN (Q5VZB9), DMRTA_MOUSE (Q8CFG4), DMRTB_HUMAN (Q96MA1), DMRTB_MOUSE (A2A9I7), DMRTD_BOVIN (Q32LE6), DMRTD_HUMAN (Q8IXT2), DMRTD_MOUSE (Q8CGW9), DMT1A_XENLA (Q3LH63), DMT1B_XENLA (B7ZS42), DMT1Y_ORYLA (Q8JIR6), DMT3A_DANRE (P83758), DMTA2_BOVIN (A6QQ94), DMTA2_DANRE (Q5UU75), DMTA2_HUMAN (Q96SC8), DMTA2_MONAL (A8TSS9), DMTA2_MOUSE (A2A9A2), DMTA2_ORENI (Q6YHU8), DMTA2_ORYLA (Q76L87), DMTA2_TAKRU (Q4AE28), DMTA2_XENLA (Q2MJB4), DMTA2_XENTR (A4QNP7), DMTA2_XIPMA (Q2I327), DMW_XENLA (B0I1G7), DSX_DROME (P23023), MAB3_CAEEL (O18214) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	1 sequence MAB23_CAEEL (G5ECK3)
UniProtKB/Swiss-Prot 'Partial' sequences	2 sequences DMRT1_ALLMI (Q9PUE0), DMRT1_TRASC (P57690)
PDB [Detailed view]	2 PDB 1LPV; 4YJ0