PROSITE entry PS40000
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS40000 |
| Entry name [info] | DM_1 |
| Accession [info] | PS40000 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2001 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50809 |
Name and characterization of the entry
| Description [info] | DM DNA-binding domain signature. |
| Pattern [info] |
C-x(2)-C-x(2)-H-x(8)-H-x(3,4)-C-x(4)-C-x-C-x(2,3)-C. |
Numerical results [info]
| Total number of hits | 48 in 45 different sequences |
| Number of true positive hits | 48 in 45 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 97.96 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
45 sequences
DMD10_CAEEL (G5EEJ1), DMD3_CAEEL (Q9XWN9), DMD4_CAEEL (Q18248), DMD5_CAEEL (Q19291), DMR3T_HORSE (J7FCF0), DMRT1_BOVIN (C0LZJ1), DMRT1_CHICK (Q9PTQ7), DMRT1_DANRE (Q71MM5), DMRT1_HUMAN (Q9Y5R6), DMRT1_MOUSE (Q9QZ59), DMRT1_ORYLA (Q801F8), DMRT1_PIG (Q9TT01), DMRT1_XENTR (P85119), DMRT2_HUMAN (Q9Y5R5), DMRT2_MOUSE (Q8BG36), DMRT3_HORSE (F6W2R2), DMRT3_HUMAN (Q9NQL9), DMRT3_MOUSE (Q80WT2), DMRT3_RAT (D4A218), DMRT3_TAKRU (Q90WM5), DMRTA_HUMAN (Q5VZB9), DMRTA_MOUSE (Q8CFG4), DMRTB_HUMAN (Q96MA1), DMRTB_MOUSE (A2A9I7), DMRTD_BOVIN (Q32LE6), DMRTD_HUMAN (Q8IXT2), DMRTD_MOUSE (Q8CGW9), DMT1A_XENLA (Q3LH63), DMT1B_XENLA (B7ZS42), DMT1Y_ORYLA (Q8JIR6), DMT3A_DANRE (P83758), DMTA2_BOVIN (A6QQ94), DMTA2_DANRE (Q5UU75), DMTA2_HUMAN (Q96SC8), DMTA2_MONAL (A8TSS9), DMTA2_MOUSE (A2A9A2), DMTA2_ORENI (Q6YHU8), DMTA2_ORYLA (Q76L87), DMTA2_TAKRU (Q4AE28), DMTA2_XENLA (Q2MJB4), DMTA2_XENTR (A4QNP7), DMTA2_XIPMA (Q2I327), DMW_XENLA (B0I1G7), DSX_DROME (P23023), MAB3_CAEEL (O18214)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MAB23_CAEEL (G5ECK3) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
DMRT1_ALLMI (Q9PUE0), DMRT1_TRASC (P57690) |
| PDB [Detailed view] |
2 PDB
1LPV; 4YJ0 |