PROSITE entry PS50020
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS50020 |
| Entry name [info] | WW_DOMAIN_2 |
| Accession [info] | PS50020 |
| Entry type [info] | MATRIX |
| Date [info] |
01-NOV-1995 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50020 |
| Associated ProRule [info] | PRU00224 |
Name and characterization of the entry
| Description [info] | WW/rsp5/WWP domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=34; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=31; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.2776000; R2=0.0197000; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1518.2681885; R2=1.0788643; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=418; H_SCORE=1969; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=316; H_SCORE=1859; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=-50; E1=-50; MI=-105; MD=-105; IM=-105; DM=-105; ...» more |
Numerical results [info]
| Total number of hits | 392 in 227 different sequences |
| Number of true positive hits | 392 in 227 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 17 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.84 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | K_Hofmann |
| Feature key [info] | DOMAIN |
| Feature description [info] | WW |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
227 sequences
APBB1_HUMAN (O00213), APBB1_MOUSE (Q9QXJ1), APBB1_RAT (P46933),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
17 sequences
CFL1_ARATH (Q5HZ54), CFL1_ORYSI (B8AIM8), CFL1_ORYSJ (Q0E0W7),» more |
| PDB [Detailed view] |
238 PDB
1E0L; 1E0N; 1EG3; 1EG4; 1F8A; 1I5H; 1I6C; 1I8G; 1I8H; 1JMQ; 1K5R; 1K9Q; » more |