PROSITE entry PS50330
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PURL: https://purl.expasy.org/prosite/signature/PS50330
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General information about the entry
| Entry name [info] | UIM |
| Accession [info] | PS50330 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAY-2003 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50330 |
| Associated ProRule [info] | PRU00213 |
Name and characterization of the entry
| Description [info] | Ubiquitin-interacting motif (UIM) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=20; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=20; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.2009000; R2=0.0080229; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1468.8551025; R2=0.3444180; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=910; H_SCORE=1782; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=599; H_SCORE=1675; N_SCORE=6.0; MODE=1; TEXT='?'; /DEFAULT: B1=-128; E1=-128; MI=0; MD=0; IM=0; ID=0; DM=0; DI=0; M0=-15; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; IM=-76; II=-8; ID=-353; /M: SY='E'; M= -66,-252, 61, 66, -17, -23,-179,-189, -32,-206,-173, 18,-164, 31, 8, 38, 6, -70,-183, -40; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M=-111,-251, 79, 98, -41,-167,-180, -77,-155, -98, -16, -38,-165, -24,-152,-111,-153, 4,-182, 36; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='D'; M= -93,-252, 103, 77,-212,-166,-179,-189, -40,-206,-174, -23,-165, 17,-151, -4, -58,-192,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M= 29,-252, 38, 91,-212,-166,-179,-189, -50, -7, -19, -25, 16, 17,-151,-151,-152, -15,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='Q'; M= -80,-252, 67, 61,-212,-166,-179, -4,-153, 18, 65, -15,-165, 73, 33,-151,-152,-192,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='L'; M=-208,-220,-251,-258, 21,-224,-218, 69,-314, 88, 9,-238,-228,-240,-230,-226,-205,-178,-165, 44; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='Q'; M= 51,-252, 2, 49,-212,-166,-179,-189, -27, -44, 29,-138,-165, 91, 22, -44,-152,-192,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='M'; M= 3, -10,-134, -17,-111,-166,-180, -39, 29, 37, 72,-138,-165, 55, 55,-151, -41,-192, 41, 27; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='A'; M= 101,-227,-180,-184,-178,-198,-203,-166,-203,-183,-159,-181,-198,-189,-190,-188,-121, 17,-169,-172; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='I'; M=-176,-237,-152,-156,-191,-180,-190, 94, -50, 70, 62,-155,-179, -16,-167,-166, -18, 13,-175,-175; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M= 43,-252,-133, 73,-212,-166,-179,-189, -4, -42, 16, -43,-165, 64, 40, -5, -44,-192,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='M'; M= -4,-237,-153, 72,-190,-180,-190, 4,-174, 56, 111,-156,-180, 24,-168,-167,-166, -28,-175, -96; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='S'; M= -51,-241,-145, -40,-196,-175,-186,-179,-166,-196,-168,-149,-174,-158,-162, 113,-161,-188,-178,-176; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='M'; M= -28,-252,-134, 11,-212,-166,-179,-189, 33, 62, 93,-138,-165, 18, 42,-151, -54, -12,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M= -10,-252, -34, 65,-113, -33, -28, -20, 40, -27, -33, -37,-165, 65, 23, -10, -52, -62,-183,-178; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M= -40,-252, 61, 96,-212, -23,-179, -72,-153, -92, -39, 30,-165, -4,-151, -42, 10, -46,-183, -73; /I: MI=-423; MD=-343; IM=-76; II=-8; ID=-356; DM=-43; DI=-230; DD=-21; /M: SY='E'; M= 31, -93, -40, 48, 14, -48, -26, -39, -5, -30, 34, 12, -20, 39,-151, 9, -8, -17,-183, -3; /I: MI=-419; MD=-340; IM=-76; II=-8; ID=-355; DM=-43; DI=-228; DD=-21; /M: SY='E'; M= -9,-250, -20, 74,-209, 8,-177,-187, -9,-203, -56, 47, -4, 18, 29, 10, -21, -38,-180,-175; /I: MI=-419; MD=-340; IM=-76; II=-8; ID=-355; DM=-43; DI=-228; DD=-21; /M: SY='M'; M= -2,-250, 9, 56, -63, -40, -7,-186, 29, -28, 58, 6, 5, 35, 7, -4, -24,-189,-180, -38; /I: MI=-419; MD=-340; IM=-76; II=-8; ID=-355; DM=-43; DI=-228; DD=-21; /M: SY='R'; M= -9,-249, 29, 19, -50, 12, -35, -30, -9, -82,-170, -22, 13, 0, 63, 24, -32, -13, 19,-175; /I: E1=0; MI=-419; II=-8; DI=-189;» more |
Numerical results [info]
| Total number of hits | 214 in 131 different sequences |
| Number of true positive hits | 210 in 127 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 4 in 4 different sequences |
| Number of false negative sequences | 41 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 98.13 % |
| Recall (true positives / (true positives + false negatives)) | 83.67 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 3 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | K_Hofmann |
| Feature key [info] | DOMAIN |
| Feature description [info] | UIM |
| Version [info] | 5 |
Cross-references [info]