PROSITE entry PS50803
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General information about the entry
| Entry name [info] | OAR |
| Accession [info] | PS50803 |
| Entry type [info] | MATRIX |
| Date [info] |
01-DEC-2001 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50803 |
| Associated ProRule [info] | PRU00138 |
Name and characterization of the entry
| Description [info] | OAR domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=14; /DISJOINT: DEFINITION=PROTECT; N1=2; N2=13; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8701861; R2=0.0078508; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=863.7844238; R2=0.1522222; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=781; H_SCORE=983; N_SCORE=9.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=463; H_SCORE=934; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-146; D=-75; I=-75; B1=-750; E1=-750; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='S'; M= -20, 27, -68, -34,-240,-177, 46,-164,-183, 39,-230, 3,-246,-254,-242, 68, 57,-233,-122,-238; /M: SY='S'; M=-219,-242,-233,-234,-252, -30,-236,-252,-234,-255,-248, -32,-241,-226,-239, 118,-214,-244,-260,-244; /M: SY='I'; M=-238,-249,-255,-254,-228,-261,-256, 97,-250, 15,-216,-246,-249,-249,-254,-239, 62, -7,-106,-235; /M: SY='A'; M= 87,-244, -20, -2,-255,-232,-239,-244,-232,-245,-238, -90,-243, 78,-235, -18, -17, -54,-254,-245; /M: SY='R'; M= 38, 28,-121, -21,-252,-237,-178,-249, -13, -46,-242, 22,-129,-182, 62, 60, -25,-111,-259,-244; /I: I=-23; MD=-115; /M: SY='L'; M=-257,-259,-274,-266,-136,-276,-258,-221,-268, 89,-218,-273,-162,-260,-265,-267,-253,-131,-261,-243; D=-23; /I: I=-23; MI=-115; IM=-115; DM=-115; /M: SY='R'; M= -11,-259,-241,-229,-253,-252,-230,-259,-202,-252,-241,-234,-252,-218, 125,-237,-242,-251,-253,-240; /M: SY='M'; M= 0,-250,-251,-241,-115,-252, 11, -6,-146, 25, 114,-243,-190, -29, 73,-188,-239,-227,-251, -52; /M: SY='K'; M=-146,-255,-233,-220,-256,-247,-234,-257, 115,-255,-243, -61,-242,-217, 38,-234,-235,-252,-250,-242; /M: SY='A'; M= 84,-243,-247,-240,-242, -56,-245,-233,-242, 40,-229,-242, 29,-238,-246, 25,-230,-229,-253,-244; /M: SY='K'; M=-235,-253,-234, 24,-251, 40,-220,-183, 70, -6,-239,-230,-244, 4, 42, 21,-236, -52,-253,-243; /M: SY='E'; M=-162,-259, 59, 96,-260,-249, 61,-261, -21,-254,-247,-226,-238, 55, 20,-233,-238,-256,-261,-243; /M: SY='H'; M= -60,-255,-235,-234, -55,-245, 141,-252,-237, -56,-231,-227,-123, 0,-211,-234,-242,-250,-254, 58; /M: SY='S'; M= 90, 15,-232, 20,-250,-233, -93, -70, -46, -57, -90, 17, -90, -14,-238, 85, 23, -61,-259,-245; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 80 in 80 different sequences |
| Number of true positive hits | 80 in 80 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | MOTIF |
| Feature description [info] | OAR |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
80 sequences
ALX1_DANRE (Q1LVQ7), ALX1_GEOFO (P0DMV5), ALX1_HUMAN (Q15699), ALX1_MOUSE (Q8C8B0), ALX1_RAT(Q63087), ALX1_XENLA (Q91574), ALX4_BOVIN (Q4LAL6), ALX4_HUMAN (Q9H161), ALX4_MOUSE (O35137), AL_DROME(Q06453), ARX_DANRE (O42115), ARX_HUMAN (Q96QS3), ARX_MOUSE (O35085), ARX_RAT (A6YP92), DMBX1_CHICK (F1NEA7), DMBX1_HUMAN (Q8NFW5), DMBX1_MOUSE (Q91ZK4), DMX1A_DANRE (Q8JI10), DMX1B_DANRE (Q566X8), DRGX_HUMAN (A6NNA5), DRGX_MOUSE (Q8BYH0), DRGX_RAT(Q62798), OTBP_DANRE (Q6DGH9), OTP_DROME (P56672), OTP_HELER (Q6SR69), OTP_HELTB (Q6SR68), OTP_HUMAN (Q5XKR4), OTP_LYTVA (Q6SZ65), OTP_MOUSE (O09113), OTP_PARLI (O76971), OTP_SACKO (Q7YTC2), PAX7_HUMAN (P23759), PAX7_MOUSE (P47239), PITX1_CHICK (P56673), PITX1_HUMAN (P78337), PITX1_MOUSE (P70314), PITX1_RAT (Q99NA7), PITX1_XENLA (Q9W751), PITX2_CHICK (O93385), PITX2_DANRE (Q9W5Z2), PITX2_HUMAN (Q99697), PITX2_MOUSE (P97474), PITX2_RAT (Q9R0W1), PITX2_XENLA (Q9PWR3), PITX3_DANRE (Q6QU75), PITX3_HUMAN (O75364), PITX3_MOUSE (O35160), PITX3_RAT (P81062), PITX3_XENLA (Q9I8K3), PITX_BRABE (Q9U637), PITX_DROME (O18400), PRRX1_CHICK (Q05437), PRRX1_HUMAN (P54821), PRRX1_MOUSE (P63013), PRRX1_RAT (P63014), PRRX2_CHICK (Q90963), PRRX2_HUMAN (Q99811), PRRX2_MOUSE (Q06348), RX1_CHICK (Q9PVY0), RX1_DANRE (O42356), RX1_PSAFA (Q9I9D5), RX2_CHICK (Q9PVX0), RX2_DANRE (O42357), RX2_ORYLA (Q9I9A2), RX3_DANRE (O42358), RXA_XENLA (O42201), RXB_XENLA (O42567), RX_DROME(Q9W2Q1), RX_HUMAN(Q9Y2V3), RX_MOUSE(O35602), RX_RAT (Q9JLT7), SHOX2_HUMAN (O60902), SHOX2_MOUSE (P70390), SHOX2_RAT (O35750), SHOX_HUMAN (O15266), VSX2_CHICK (Q9IAL1), VSX2_DANRE (O42477), VSX2_HUMAN (P58304), VSX2_MOUSE (Q61412), VSX2_ORYLA (Q9I9A3)» more
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