PROSITE entry PS50816
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General information about the entry
| Entry name [info] | NAF |
| Accession [info] | PS50816 |
| Entry type [info] | MATRIX |
| Date [info] |
01-NOV-2003 CREATED;
10-MAY-2017 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50816 |
| Associated ProRule [info] | PRU00256 |
Name and characterization of the entry
| Description [info] | NAF domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=25; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=23; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.3494120; R2=0.0163142; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1035.9123535; R2=1.0358566; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=500; H_SCORE=1554; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=378; H_SCORE=1427; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-9; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='E'; M= -6, 2,-23, 7, 19,-24,-18, -9,-19, 1,-15,-12, -5, 2, 2, -7, -3, -6,-16,-30,-18, 10; /M: SY='R'; M= -3, -1,-23, -2, 4,-24, -5, -6,-22, 7,-22, -9, 3,-12, 7, 8, 6, -1,-17,-27,-16, 5; /M: SY='P'; M= -1,-18,-28,-13, -6,-22,-15,-20,-12,-13,-19,-13,-16, 45,-12,-19, -3, -4,-15,-29,-24,-12; /M: SY='T'; M= 2, -4,-18, -8, -3,-16,-16,-12,-11, 0,-11, -8, -1,-12, -4, 0, 3, 7, -5,-27,-13, -4; /M: SY='S'; M= -2, -2,-15, -6, -8,-10,-14, -8, -8,-12,-12, -7, 3,-14, -6,-11, 7, 6, -6,-29,-10, -8; /M: SY='L'; M=-11,-27,-22,-32,-23, 9,-29,-15, 25,-24, 32, 31,-24,-25,-15,-19,-24,-10, 13,-18, 2,-19; /M: SY='N'; M= -9, 36,-19, 17, -1,-19, -2, 7,-19, -1,-28,-19, 53,-19, -1, -1, 11, 6,-27,-39,-19, -1; /M: SY='A'; M= 50,-10,-10,-20,-10,-20, 0,-20,-10,-10,-10,-10,-10,-10,-10,-20, 10, 0, 0,-20,-20,-10; /M: SY='F'; M=-20,-30,-20,-40,-30, 80,-30,-20, 0,-30, 10, 0,-20,-30,-40,-20,-20,-10, 0, 10, 30,-30; /M: SY='D'; M=-13, 27,-29, 39, 29,-35,-15, 6,-33, 3,-24,-20, 10, -8, 15, -4, 0,-10,-29,-33,-16, 22; /M: SY='L'; M=-11,-30,-24,-35,-25, 9,-34,-24, 32,-29, 34, 20,-25,-25,-20,-24,-25,-10, 18,-18, 2,-25; /M: SY='I'; M=-10,-30,-29,-39,-29, 1,-39,-29, 47,-30, 23, 20,-21,-21,-20,-29,-21,-10, 28,-20, 0,-29; /I: I=-15; MI=0; MD=-32; IM=0; DM=-32; /M: SY='S'; M= 15, -4,-13, -7, -5,-20, 5,-14,-17,-12,-24,-16, 4,-11, -5,-14, 28, 12, -8,-33,-20, -5; /I: I=-15; MI=0; MD=-32; IM=0; DM=-32; /M: SY='L'; M=-10,-22,-11,-26,-19, 9,-22,-13, 5,-18, 17, 17,-19,-25,-14,-11,-15, -6, 2,-19, 0,-16; /M: SY='S'; M= 12, 1,-10, -1, -1,-20, 0,-10,-19,-10,-29,-19, 11,-10, -1,-10, 37, 18,-10,-39,-20, -1; /I: I=-13; MD=-27; /M: SY='S'; M= 0, -3,-21, -3, 6,-25,-12, -8,-20, 3,-23,-13, 0, 3, 11, 2, 12, 6,-17,-28,-16, 7; D=-13; /I: I=-13; MI=-27; MD=-27; IM=-27; DM=-27; /M: SY='G'; M= 1, -8,-22, -8,-14,-24, 47,-18,-33,-17,-25,-18, -1,-18,-17,-18, 1,-15,-24,-21,-25,-15; D=-13; /I: I=-13; DM=-27; /M: SY='F'; M=-12,-26,-18,-30,-21, 35,-26,-18, 7,-27, 24, 7,-21,-27,-25,-18,-18, -7, 4, -9, 10,-21; D=-13; /I: I=-13; DM=-27; /M: SY='D'; M=-15, 43,-26, 50, 12,-33, -4, 2,-33, -1,-30,-26, 31,-13, -1, -7, 5, -6,-29,-39,-20, 6; /M: SY='L'; M=-10,-30,-20,-30,-20, 10,-30,-20, 21,-30, 49, 20,-30,-30,-20,-20,-30,-10, 10,-20, 0,-20; /M: SY='S'; M= 10, 1,-14, 2, 2,-23, 5,-11,-23, -9,-27,-20, 7,-10, -1,-11, 29, 11,-13,-35,-21, 0; /M: SY='G'; M= 0, 1,-26, -3,-12,-26, 38,-13,-31,-12,-29,-19, 12,-12,-12,-14, 5,-10,-26,-26,-26,-12; /M: SY='L'; M=-12,-29,-20,-32,-22, 20,-29,-19, 17,-29, 42, 20,-28,-29,-22,-19,-28,-10, 8,-15, 5,-21; /M: SY='F'; M=-20,-30,-20,-40,-30, 78,-30,-20, 1,-30, 10, 1,-20,-30,-39,-20,-20,-10, 1, 9, 29,-30; /M: SY='E'; M= -9, 10,-30, 19, 33,-31, -3, -5,-31, 2,-23,-20, 2, -4, 8, -6, -1,-12,-28,-29,-21, 20; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 59 in 59 different sequences |
| Number of true positive hits | 59 in 59 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Feature key [info] | DOMAIN |
| Feature description [info] | NAF |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
59 sequences
CIPK1_ARATH (Q8RWC9 ), CIPK1_ORYSJ (Q9LGV5 ), CIPK2_ARATH (Q9LYQ8 ), CIPK2_ORYSJ (Q7X996 ), CIPK3_ARATH (Q2V452 ), CIPK3_ORYSJ (Q8LIG4 ), CIPK4_ARATH (Q9SUL7 ), CIPK4_ORYSJ (Q2QMI0 ), CIPK5_ARATH (Q9LEU7 ), CIPK5_ORYSJ (Q9LWM4 ), CIPK6_ARATH (O65554 ), CIPK6_ORYSJ (Q6Z9F4 ), CIPK7_ARATH (Q9XIW0 ), CIPK7_ORYSJ (Q75GK4 ), CIPK8_ARATH (Q9STV4 ), CIPK8_ORYSJ (Q5JLD8 ), CIPK9_ARATH (Q9MAM1 ), CIPK9_ORYSJ (Q10SC8 ), CIPKA_ARATH (Q9C562 ), CIPKA_ORYSJ (Q10LQ2 ), CIPKB_ARATH (O22932 ), CIPKB_ORYSJ (Q0JI49 ), CIPKC_ARATH (Q9SN43 ), CIPKC_ORYSJ (Q5JLS2 ), CIPKD_ARATH (O22971 ), CIPKD_ORYSJ (Q5QNM6 ), CIPKE_ARATH (Q9LZW4 ), CIPKE_ORYSJ (Q2QYM3 ), CIPKF_ARATH (P92937 ), CIPKF_ORYSJ (Q2RBF0 ), CIPKG_ARATH (Q9SEZ7 ), CIPKG_ORYSJ (Q6ERS4 ), CIPKH_ARATH (Q94C40 ), CIPKH_ORYSJ (Q75L42 ), CIPKI_ARATH (Q9LP51 ), CIPKI_ORYSJ (Q5W736 ), CIPKJ_ARATH (Q9FJ55 ), CIPKJ_ORYSJ (Q68Y49 ), CIPKK_ARATH (Q9FJ54 ), CIPKK_ORYSJ (Q60EY8 ), CIPKL_ARATH (Q94CG0 ), CIPKL_ORYSJ (Q0D4B2 ), CIPKM_ARATH (O80902 ), CIPKM_ORYSJ (Q5KQF5 ), CIPKN_ARATH (Q93VD3 ), CIPKN_ORYSJ (Q6ZLP5 ), CIPKO_ARATH (Q9LDI3 ), CIPKO_ORYSJ (Q69Q47 ), CIPKP_ARATH (Q8W1D5 ), CIPKP_ORYSJ (Q5Z6X0 ), CIPKQ_ARATH (Q84VQ3 ), CIPKQ_ORYSJ (Q6H7U5 ), CIPKR_ORYSJ (Q6ERS0 ), CIPKS_ORYSJ (A3B529 ), CIPKT_ORYSJ (Q7XIW5 ), CIPKU_ORYSJ (Q5JLQ9 ), CIPKV_ORYSJ (Q6X4A2 ), CIPKW_ORYSJ (Q2QY53 ), CIPKX_ORYSJ (Q2RAX3 )» more
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| PDB [Detailed view] |
5 PDB
2EHB; 2ZFD; 4CZT; 4CZU; 4D28 |