PROSITE logo

PROSITE entry PS50941


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50941
Entry name [info] CHIT_BIND_I_2
Accession [info] PS50941
Entry type [info] MATRIX
Date [info] 01-NOV-2003 CREATED;
01-NOV-2003 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00025
Associated ProRule [info] PRU00261

Name and characterization of the entry

Description [info] Chitin-binding type-1 domain profile.
Matrix / Profile [info] 
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=42;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=42;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2388287; R2=0.0049724; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=1059; N_SCORE=7.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=938; N_SCORE=6.9; MODE=1; TEXT='RR';
/DEFAULT: M0=-10; D=-30; I=-30; B1=-50; E1=-50; MI=-105; MD=-105; IM=-105; DM=-105;

...
 
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='A';  M= 12,  1,-19, -1, -4,-19, -7, -9,-16, -5,-15,-12,  0,-13, -6, -9,  5, -1, -9,-24,-12, -5;
/M: SY='Q';  M= -4, -3,-29, -3, 10,-27, -7,  2,-22,  1,-21,-10, -1, -9, 18, -2, -2,-10,-24,-13,-11, 14;
/M: SY='Q';  M=-10,  6,-27,  4, 15,-27,-15,  3,-24, 12,-21,-11, 10,-11, 21, 19,  0, -6,-24,-26,-14, 17;
/M: SY='C';  M=-10,-20,118,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30, -9,-10,-10,-50,-30,-30;
/M: SY='G';  M= -2, -8,-29, -8,-17,-29, 56,-18,-35,-17,-27,-17, -1,-18,-17,-17, -1,-18,-26,-21,-27,-17;
/I:         I=-5; MD=-16;
/M: SY='R';  M= -6, -7,-22, -6,  0,-19,-13, -3,-19,  9,-19,-10, -2,  3,  2, 15,  0, -2,-14,-22,-12, -1; D=-5;
/I:         I=-5; MI=0; MD=-16; IM=0; DM=-16;
/M: SY='Q';  M= -6,  6,-20,  7, 10,-22,-11,  3,-16,  2,-14, -7,  3, -8, 21,  1,  0, -6,-18,-13, -8, 16; D=-5;
/I:         I=-5; DM=-16;
/M: SY='A';  M= 13, -9,-13,-14, -9, -4, -4,-12, -8, -5, -7, -6, -7,-10, -9, -8,  0, -3, -3,-12, -7, -9; D=-5;
/I:         I=-5; DM=-16;
/M: SY='G';  M= -1, -4,-22, -5,-10,-19, 31,-10,-25,-11,-21,-14,  1,-12, -9,-12,  2, -9,-20,-16,-15,-10; D=-5;
/I:         I=-5; DM=-16;
/M: SY='G';  M= -4,  2,-22,  0, -9,-18, 29, -9,-26, -9,-22,-15,  9,-16,-10, -6,  1,-10,-21,-20,-18,-10; D=-5;
/I:         I=-5; DM=-16;
/M: SY='A';  M=  8, -6,-18, -9, -3,-20, -3,-11,-16,  2,-15, -9, -4, -6,  0,  2,  2, -1,-10,-20,-15, -3; D=-5;
/I:         I=-5; DM=-16;
/M: SY='T';  M= -4,-13,-16,-14, -8, -6,-16,-15, -2,-10,  3, -2,-11,-11,-10, -7, -2,  6,  1,-23, -9,-10; D=-5;
/I:         I=-5; DM=-16;
/M: SY='C';  M=-10,-20,116,-30,-30,-17,-30,-30,-29,-30,-19,-19,-20,-40,-30,-30,-10,-10,-10,-48,-28,-30;
/M: SY='P';  M=  6,-12,-28,-10, -3,-25,-11,-14,-17, -9,-22,-15,-10, 38, -6,-16,  0, -4,-19,-28,-23, -7;
/M: SY='N';  M= -3, 10,-23,  6, -2,-22,  5, -5,-22, -7,-22,-16, 17, -9, -4, -9,  6, -2,-22,-31,-20, -3;
/M: SY='N';  M= -7, 13,-21,  8, -4,-25, 19, -7,-28, -7,-25,-18, 20,-18, -8, -8,  3, -8,-26,-31,-22, -6;
/M: SY='L';  M= -8,-21,-22,-23,-13,  1,-26,-12,  8,-14, 21, 14,-20,-24,-10, -6,-19, -8,  4,-18,  1,-12;
/I:         I=-8; MI=0; MD=-27; IM=0; DM=-27;
/M: SY='C';  M=-10,-20,115,-29,-29,-20,-30,-29,-30,-28,-20,-20,-19,-39,-29,-27,-10,-10,-10,-49,-29,-29;
/M: SY='C';  M=-10,-20,118,-30,-30,-20,-30,-30,-30,-29,-20,-20,-20,-40,-29,-28,-10,-10,-10,-50,-30,-30;
/M: SY='S';  M= 10,  0,-10,  0,  0,-20,  0,-10,-19,-10,-29,-20, 10,-10,  0,-10, 39, 20,-10,-40,-20,  0;
/M: SY='Q';  M= -6, -4,-26, -4, 11,-27,-20, -4,-15, 10,-17, -5, -3,-10, 23,  7, -2, -7,-15,-23,-12, 16;
/M: SY='W';  M=-11,-22,-29,-25,-21, 26,-19, -3,-10,-18, -6, -7,-19,-26,-19,-16,-19,-14,-13, 35, 33,-19;
/M: SY='G';  M=  0,-10,-30,-10,-20,-30, 70,-20,-40,-20,-30,-20,  0,-20,-20,-20,  0,-20,-30,-20,-30,-20;
/M: SY='W';  M=-20,-30,-36,-32,-26, 30,-25, -8, -9,-18, -7, -9,-27,-30,-20,-16,-27,-18,-17, 74, 46,-21;
/M: SY='C';  M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='G';  M=  0,-10,-30,-10,-20,-30, 69,-20,-40,-20,-30,-20,  0,-20,-20,-20,  0,-20,-30,-20,-30,-20;
/M: SY='T';  M= -4,  5,-17,  0, -6,-13,-10,-11,-12, -9,-12,-10,  9,-16, -8, -9,  9, 15, -9,-31,-13, -7;
/M: SY='T';  M=  0,  0,-16, -6,-10,-17,  3,-17,-19,-11,-18,-14,  3,-12,-10,-11, 17, 27,-10,-29,-16,-10;
/M: SY='D';  M= -3, 11,-25, 16, 13,-27,-10, -6,-24, -1,-23,-19,  5,  0,  2, -7,  5, -3,-20,-31,-18,  7;
/M: SY='D';  M= -1, 13,-27, 20, 19,-30, -9, -7,-27,  1,-23,-20,  3,  3,  3, -8,  1, -7,-23,-30,-21, 11;
/M: SY='Y';  M=-20,-19,-29,-20,-19, 30,-29, 24, -3,-12, -1,  0,-17,-29,-11,-10,-19,-11,-11, 21, 67,-19;
/M: SY='C';  M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='G';  M= -1, -3,-22, -4,-11,-28, 41,-16,-34,-12,-29,-19,  4,-17,-13,-14,  5,-11,-25,-26,-26,-12;
/M: SY='E';  M= -4,  4,-25,  6,  7,-24, -8, -8,-23,  0,-23,-16,  3,  1,  1, -3,  4, -2,-20,-29,-18,  3;
/I:         I=-5; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='G';  M= -2,  1,-26, -2,-13,-25, 44,-13,-34,-14,-29,-20, 10,-19,-14,-14,  4,-12,-27,-25,-25,-13;
/M: SY='C';  M=-10,-18,112,-27,-28,-20,-28,-29,-30,-29,-21,-20,-18,-38,-28,-29, -8, -9,-10,-49,-29,-28;
/M: SY='Q';  M=-10, -3,-29, -2, 15,-31,-20,  5,-19,  8,-17, -2, -3, -8, 42,  9, -3,-10,-25,-19, -8, 28;
/I:         I=-7; MI=0; MD=-25; IM=0; DM=-25;
/M: SY='S';  M=  4, -5,-16, -6, -9,-18, 17,-12,-24,-14,-26,-18,  3,-13, -9,-14, 20,  5,-16,-28,-16, -9;
/M: SY='Q';  M= -6,  0,-29, -1,  7,-31, -8, -2,-22,  2,-24,-11,  5,  6, 21,  1,  1, -7,-27,-26,-18, 13;
/M: SY='C';  M=-10,-19,115,-29,-29,-20,-30,-30,-29,-29,-20,-20,-19,-39,-29,-29, -9, -8,-10,-49,-29,-29;
/M: SY='B';  M= -9,  4,-22,  4, -2,-18, -7, -8,-23, -3,-22,-17,  4,-13, -5, -1,  2, -2,-19,-15,-10, -4;
/M: SY='G';  M=  1, -7,-22, -8, -8,-17,  3,-10,-17,-10,-18,-12, -3, -7, -7,-12,  3, -3,-14,-21, -9, -9;
/I:         E1=0; IE=-105; DE=-105;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 131 in 96 different sequences
Number of true positive hits 131 in 96 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.50 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 7
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] Chitin-binding type-1
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 96 sequences 

AGI1_WHEAT  (P10968), AGI2_WHEAT  (P02876), AGI3_WHEAT  (P10969), 

AGI_HORVU   (P15312), AGI_ORYSI   (Q01MB6), AGI_ORYSJ   (Q0JF21), 
AGI_URTDI   (P11218), AMP1_FAGES  (P0DKH7), AMP1_STEME  (E1UYT9), 
AMP2_FAGES  (P0DKH8), AMP2_STEME  (E1UYU0), AMP_AMARE   (Q5I2B2), 
AMP_IPONI   (P81591), AMP_LYMAR   (P86521), AMP_TRIKH   (P85966), 
CBLE_VISAL  (P81859), CDA_PESTX   (A0A1L3THR9), CHAL_BRARR  (P81729), 
CHI12_ORYSJ (P25765), CHI1_GOSHI  (Q39799), CHI1_HEVBR  (Q949H3), 
CHI1_HORVU  (P11955), CHI1_ORYSJ  (Q42993), CHI1_SOLTU  (P52403), 
CHI1_THECC  (Q41596), CHI1_TOBAC  (P08252), CHI2_BRANA  (Q09023), 
CHI2_GOSHI  (Q39785), CHI2_HEVBR  (W0IWL0), CHI2_ORYSJ  (Q7DNA1), 
CHI2_PEA(P21226), CHI2_SOLTU  (P52404), CHI2_TOBAC  (P24091), 
CHI3_ORYSJ  (P24626), CHI3_SOLTU  (P52405), CHI3_TOBAC  (P29059), 
CHI4_BRANA  (Q06209), CHI4_CRYJA  (Q5NTA4), CHI4_ORYSJ  (O04138), 
CHI4_PHAVU  (P27054), CHI4_SOLTU  (P52406), CHI58_ARATH (O24598), 
CHI59_ARATH (O24658), CHI5_ARATH  (Q9M2U5), CHI5_ORYSJ  (Q7Y1Z0), 
CHI5_PHAVU  (P36361), CHI60_ARATH (O24654), CHI61_ARATH (O22842), 
CHI62_ARATH (O22841), CHI6_ORYSJ  (Q6K8R2), CHI6_POPTR  (P16579), 
CHI7_ORYSI  (Q9SAY3), CHI7_ORYSJ  (Q7Y1Z1), CHI8_POPTR  (P16061), 
CHI9_ORYSJ  (Q688M5), CHIA_MAIZE  (P29022), CHIA_SECCE  (Q9FRV1), 
CHIB_ARATH  (P19171), CHIB_MAIZE  (P29023), CHIB_POPTR  (P29031), 
CHIB_VITVI  (P51613), CHIC_POPTR  (P29032), CHIC_SOLLC  (Q05538), 
CHIL_HEVBR  (Q8GUD7), CHIP_BETVU  (P42820), CHIT_ACTCC  (P86473), 
CHIT_DIOJA  (P80052), CHIT_PERAE  (P93680), CHIT_PHAVU  (P06215), 
CHIT_SOLTU  (P05315), CHIX_PEA(P36907), CHI_ARATH   (O24603), 
EAP1_EUCUL  (P83596), EAP2_EUCUL  (P83597), HEVE_HEVBR  (P02877), 
HEVL_ARATH  (P43082), HEVP_HEVBR  (P80359), KTXA_KLULA  (P09805), 
LECB_PHYAM  (Q9AVB0), LECC_PHYAM  (Q9AYP9), LECT_SOLTU  (Q9S8M0), 
LED2_PHYAM  (P83790), LP9H_BOTFB  (A0A384JZ02), LYS12_PENEN (A0A0A2JP37), 
LYS18_PENEN (A0A0A2JVV3), LYSM1_GIBM7 (W7LFX0), LYSM4_ARTBC (D4B4Q2), 
MLX56_MORAL (A7XQ02), MO1_MOROL   (A0A1S6EK91), MO2_MOROL   (A0A1S6EK92), 
MO3_MOROL   (C0HLN3), MO4_MOROL   (C0HLV3), MO5_MOROL   (C0HLV4), 
MO6_MOROL   (C0HLV5), WIN1_SOLTU  (P09761), WIN2_SOLTU  (P09762)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

AMP3_STEME  (C0HJU5), AMP_AMACA   (P27275)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			6 sequences
			


			
CHIB_PEA(P21227), CHIT_TRISX  (C0HJM6), IAMY_COILA  (P15326), 

			
IPLAA_MORAL (P86799), IPLAB_MORAL (P86800), LECA_PHYAM  (P84282)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			41 PDB
			


			1EN2; 1ENM; 1HEV; 1IQB; 1K7T; 1K7U; 1K7V; 1MMC; 1P9G; 1P9Z; 1Q9B; 1T0W; 
			
				1UHA; 1ULK; 1ULM; 1ULN; 1WGC; 1WGT; 1WKX; 1ZNT; 1ZUV; 1ZWU; 2CWG; 2DKV; 
				2KUS; 2LB7; 2N1S; 2UVO; 2WGC; 2X3T; 2X52; 3IWR; 4AML; 4MPI; 4WP4; 5WUZ; 
				7WGA; 8VU6; 8VU7; 8VU8; 9WGA
			
			

			» more