PROSITE entry PS51123

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	OMPA_2
Accession [info]	PS51123
Entry type [info]	MATRIX
Date [info]	01-JUN-2005 CREATED; 01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00819
Associated ProRule [info]	PRU00473

Name and characterization of the entry

Description [info]

OmpA-like domain profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=119;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=114;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0320632; R2=0.0284236; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=193; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=123; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B1=*; E1=*; MM=*; II=*;

...

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=-85; E0=*; BD=-80;
/M: SY='Y';  M=  -4, -21, -12,  11, -23,   1,  -9, -19,  -6, -20,  14,  -9, -23,  13,   7, -11, -11,  15, -24,  15; M0=-6;
/I:         MM=0; MI=-85; MD=-95; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=  13, -24,  15, -10, -30,  11, -13, -27, -10, -28,  12, -13, -25,  -9, -14,   7,  15, -23, -30, -24; M0=-9;
/I:         MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='W';  M=   1, -25,   3,  12,  10, -22,  -8, -25,  10,   5, -16,  -8, -23,   8,  -9, -11,   4, -21,  22, -21; M0=-5;
/I:         MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M= -12, -26, -10,   9, -29, -22,  14, -26,   7,   3, -17,  -8, -22,  16,   2,   3,   5,   9, -28, -21; M0=-6;
/I:         MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=   2, -12,   7, -29,  13, -29, -18,  20, -25,   7,  -4, -25, -29,   4, -24, -20, -13,  12, -17, -13; M0=-9;
/I:         MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  -5, -12, -17,  -5,   2, -12, -15,  18, -12,   8, -10, -11,  -4,   0,  -5,  -6,  -4,  13, -14, -14; M0=-4;
/I:         MM=-84; MI=0; MD=-143; IM=0; II=-110; DM=-7; DD=-14;
/M: SY='L';  M=  -1, -65,  -3,  -2,   6, -12, -24,  11, -10,  15,  13, -11, -13,  -4,  -2,  -9, -16,   1, -67,  -5; M0=-5;
/I:         MM=-84; MI=0; MD=-143; IM=0; II=-110; DM=-7; DD=-14;
/M: SY='S';  M=   5, -66,   9,  -1,  -4,   3,   1, -18,  -3,  -7,  -6,   8, -19,  -2,   0,  11,  -2,  -5, -68,  -7; M0=-4;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=   1, -66,  19,   1, -34,  -1, -48, -13,   3, -17,  -5,  10,  -9,  -5,   2,   3,   5,  -1, -68, -14; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M= -11, -20, -21, -18,  -4,  -9, -56,  21, -15,   4, -47, -12, -14, -22, -34,  -9,  -3,  22, -59,  -6; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Y';  M= -14, -65, -24,  -7,  17, -26,  14, -28, -14,  16,  11,  -5, -16,   2,  -5,  -7,  -1, -29, -19,  20; M0=-9;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='F';  M= -38, -58, -83, -77,  45, -75, -62, -32, -36, -23, -49, -71, -75, -22, -70, -66, -36, -13, -59,  -7; M0=-45;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=  12, -67,  25,   9, -70,  -4, -22, -35,  -4, -21, -16,   2,   7,  -2,  -5, -16, -22, -20, -68,  -4; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='F';  M= -16, -62, -34, -16,  27, -29, -14,  -6, -14,  -6, -15,  -3,   8, -12, -13,   9,  12,  -2, -18,   6; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M= -11, -67,  27, -20, -23,  24, -48, -67, -21, -42, -24,  16, -15, -20, -19, -18, -20, -63, -68, -18; M0=-22;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='S';  M= -16, -19,  -6,  -7, -33, -13, -24, -37,  18, -34, -15, -14, -24,  11,  -3,  27, -16, -30, -68, -62; M0=-15;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  23, -66,   5, -34,  -6, -20,  -4, -23, -12, -66, -23, -24, -10, -16, -32,  13,   3, -14,  -7,  19; M0=-15;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  -3, -66,  11,  13, -18, -18,  -7, -13,   6, -22, -17,   6, -62,   6,   4,   0,  11,   3, -68, -19; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -25, -53, -78, -38,  -7, -39, -59,  22, -36,  24, -14, -32, -11, -64, -66, -22, -35,  12, -58, -54; M0=-26;
/I:         MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=  -7, -66,   7, -11, -21, -21, -15, -28,  17,  -9, -25,  13, -10,   4,  10,  10,   7, -14, -68, -61; M0=-9;
/I:         MM=-2; MI=-32; MD=-142; IM=-10; II=-10; DM=-4; DD=-22;
/M: SY='P';  M=  11, -67,   6,   5, -24, -12, -48, -67,   4, -19, -26,  -9,  27,  -2, -19,   1, -15, -24, -15, -62; M0=-13;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=   6, -67,  12,  21, -24,  -8, -14, -22,   5, -17, -25,  -1, -21,   6,   0,   5, -14, -25, -15, -14; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  15, -20,   1,  -9,  11,  11, -14,  -8, -25, -17,  -7,  -5, -21,   2, -24,  12,  -9, -20, -14,   7; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=  -2, -66, -15,   2,  -3, -38,  -6,  -6,  15,  -5,   5, -14, -35,  18,  13, -15,  -6,  -6,   0,  13; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=   6, -67,   2,   7, -70, -10,  -9, -15,   6, -17, -10,  -8,  17,  14,   5,   0,  -2, -15, -68, -10; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=   2, -21,  -6,   1, -24, -38, -13,   7,   2,   7,  -4,   7, -17,   4,  -4,  -4,   8,   7,  -1, -20; M0=-4;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -11, -18, -37, -37, -22, -38, -23,  14, -38,  28, -10, -19, -33, -12, -66, -37, -54,   5, -58, -54; M0=-23;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=   3,  -9,  22,   4, -13, -10, -16, -19,   7, -16, -16,  10, -24,  12,  -3,   0, -13, -20, -68, -14; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  -1, -23,   4,  12, -33, -10, -15, -18,  14, -11, -24,   3,  -9,  12,  15,  -9,  -3, -14,  -6, -20; M0=-5;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  -6, -53, -39, -39,   5, -70,   1,  22, -37,  15,   8, -10, -71, -11, -66, -30,  -5,  16, -58, -27; M0=-21;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  30, -12, -27, -19, -16,  -5, -24,  -2, -15,  -8, -23, -20, -67, -32, -19, -12, -18,   2, -61, -15; M0=-14;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=   5, -23,  10,  14, -70, -12, -15, -19,   7, -16, -57,   5, -16,  16,   7,   3,  -6, -17, -68, -30; M0=-9;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Y';  M=   6, -21, -17,  -6,  14, -21, -26,   9,   1,   5,  -3, -19, -20,   1, -10, -13,  -5,   6,   8,  15; M0=-4;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -11, -53, -35, -72,  -4, -40, -59,  14, -27,  27,  18, -67, -71, -64, -66, -40, -20,   0, -58, -19; M0=-28;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=   2, -22,  -9,  -2, -22,  -7,  -9,  -6,  23, -10, -57,   8, -35,   8,  11,  -3,  -9, -12, -68, -62; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=   9, -67,   2,  10, -14,  -6,  -9, -23,  10, -17, -57,  10, -17,  11,   3,   5,  -1, -20, -17, -13; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Y';  M=  -7,   0,  -1, -11,   3,  -8,  20, -11,  -5,   0, -11,  17, -17,   0, -12,  -9,  -4,   2, -17,  20; M0=-3;
/I:         MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  -4, -66,   7, -11, -32,  -7, -15, -28,   5, -25, -25,   5,  31,  -3, -13,  -1,  -7, -21, -68, -15; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-15; DD=-6;
/M: SY='N';  M=  -4, -66,  12,  11, -11,   6, -13,  -8,  -2,  -7, -26,  14,   0,   5,  -7,  -8,  -1,  -5, -17, -15; M0=-4;
/I:         MM=-1; MI=-132; MD=-41; IM=-9; II=-11; DM=-15; DD=-6;
/M: SY='T';  M=   6, -65, -10,  -4, -32, -17,  -9,   2,   9,  -3, -10,   0,  -2,   1,   1,   0,  11,   0,   4,   6; M0=-3;
/I:         MM=-7; MI=-19; MD=-32; IM=-11; II=-9; DM=0; DD=-50;
/M: SY='R';  M=  -9, -65,   2,  -3, -22, -17,  12, -14,  16, -17,  -8,   7, -15,  -3,  17,   2,   6,  -6, -67,  -3; M0=-6;
/I:         MM=0; MI=-131; MD=-141; IM=-9; II=-11; DM=0; DD=-56;
/M: SY='I';  M= -10, -53, -78, -72,   8, -25, -59,  26, -37,   5, -11, -67, -71, -64, -66, -61, -28,  24, -16, -10; M0=-31;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M= -14, -21, -13,  12,  -6, -38,  -5,   7,   3,   2,   1,  -4, -63,   2,  12, -13,  10,   7, -17, -15; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M= -27, -70,-102, -98, -17, -39, -99,  29, -98,   5, -26, -97, -97, -96, -99, -94, -75,  27, -92, -88; M0=-56;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=   3, -67,   2,  20, -24, -18, -13,   3,  -8, -25, -57, -10, -63,  -6,  -6,   3,   8,  10, -68,  -2; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M= -13, -68, -96, -99, -96,  38, -89, -94, -96, -97, -87, -79, -35, -90, -92, -24, -36, -80, -98, -30; M0=-64;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='H';  M= -38, -56, -25, -36,   5, -70,  48, -51, -62, -32, -23,  -5, -34, -60, -10, -60, -55, -34, -59,  28; M0=-36;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=  12,   3, -36, -74, -77, -39, -24, -73, -73, -76, -68, -36, -76, -71, -26,  -2,  36, -28, -80, -28; M0=-41;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M= -19, -11,  40, -18, -98, -17, -69, -98, -73, -96, -90, -23, -80, -30, -83,  -1, -38, -92, -98, -33; M0=-49;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=   4, -67,   3,   0, -14, -13,  -7, -37,  -2, -35, -57,  21,  -1,  -9,   1,  18,   2, -20, -68, -21; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  -9, -64,  -5, -12, -23, -21, -49,   5,   1,  -4,  -4,  -5, -63,   3,  16,  -1,  15,  12, -19, -14; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M= -12, -21, -16, -13, -70,  33, -23, -35, -32, -44, -57, -31,  16, -16, -10, -29, -10, -37, -68, -62; M0=-23;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='S';  M=  -6, -64,  -4, -14,  -9,  -3, -23,   6,  -9, -16, -24,   2,   7, -45,  -9,  21,  12, -14, -18, -15; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=   7, -67,  18,   8, -24,  -8,   1, -18,   4, -22, -25,   0,   5,  -7,   7,   3,  -9, -25, -17,   5; M0=-6;
/I:         MM=-19; MI=-132; MD=-5; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M=  -1, -49, -16,  -4, -14,   2, -30,  -5,   3, -49, -40,  11,   8,  -9,  -6,  14,  17, -12, -51, -44; M0=-9;
/I:         MM=-65; MI=-2; MD=-31; IM=-14; II=-7; DM=-77;
/M: SY='F';  M= -11, -41,  -6,  -8,  30, -11, -31, -15, -13, -14, -33, -12, -16, -28,  -1, -18,   5, -17,  13,  26; M0=-10;
/I:         MM=0; MI=-112; MD=-122; IM=-9; II=-11; DM=0; DD=-85;
/M: SY='E';  M=  11, -67,   4,  17, -34,  -8, -24, -10,  10, -25, -25,  -8,   5,   5, -11,   5,  -8, -29, -68,  -5; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Y';  M=   1, -64,   7, -12,  -8, -11,   6,  -9, -17, -30, -16, -11, -20, -45,  -7,   8,  -9, -10,  -7,  36; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M= -20, -67, -16, -17, -70, -29, -24, -37, -20, -42, -23,  43, -34, -21, -24, -28, -51, -63, -68, -62; M0=-31;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='W';  M= -10, -60,  -6,  -6,  -4, -64, -13,   2,  -3,   7,  14, -13, -65,  23,   1, -54, -21, -20,  38,   3; M0=-15;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=   9, -67,   6,  13, -32, -12,  -2,  -4,  12, -26, -23,  -4, -15,  11,  10,  -6,  -8, -12,  -8, -14; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -83, -77,-107, -29, -32, -39, -91,  -2, -99,  32, -50,-100, -97, -89, -95, -97, -81,  -2, -79, -29; M0=-57;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='S';  M=   3, -68, -94, -42, -96,   6, -89, -94, -96, -97, -87, -79, -79, -90, -92,  34, -10, -80, -98, -98; M0=-60;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=   8, -66,  -9,  21, -18, -16, -48, -19,   0,   3,   3, -15, -63,  15,   0,  -6,  -9,  -9, -68, -10; M0=-9;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  13, -67, -13,   2, -70, -21, -14, -30,  12, -14, -27,   2, -62,  14,  26, -18, -32, -38, -68, -29; M0=-17;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M= -44, -85, -93, -77, -89, -85, -65, -90, -51, -86, -80, -74, -85, -17,  42, -80, -78, -88, -82, -30; M0=-68;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  36, -68, -96,-100, -96, -21, -89, -94, -96, -45, -87, -80, -79, -90, -92,  -6, -22, -30, -98, -98; M0=-58;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=   0, -23,   3,  13, -33, -16, -15,  -3,   2,  -2, -14,  14, -63,  19,   0,  -6,  -4,  -7, -68, -10; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  23, -64, -52,  -4, -31, -62, -49, -29, -25, -64, -16,  10, -35, -15, -13,  19,   5,  -3, -15, -18; M0=-20;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=  -1, -66, -95, -91, -13, -91, -84,   4, -89, -15, -10, -87, -90, -86, -88, -32, -30,  36, -81, -77; M0=-49;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  18, -57, -61, -13, -30, -12, -24, -13,  15,  -3,   2, -56, -67,  -4,  17, -20,  -9,   4, -61,   5; M0=-14;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=   7, -20,  19,   7, -70, -12,   3, -37,   2, -35, -12,  16, -62,   8,  13,  -2, -12, -63, -68, -11; M0=-15;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Y';  M=   8, -20, -77,  -5,  14, -31,   2,  -2, -24,  -3,   4, -25, -71, -11, -22, -26, -15,  -3,  13,  35; M0=-15;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='L';  M= -89, -82,-113,-106,  14, -41, -96,  -1,-105,  30,  12,-109,-100, -91, -99,-106, -87, -30,  -7, -83; M0=-64;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=   2, -59, -37,   2, -22, -22, -22,  18,  -7,  -2,  -5, -24, -66,  -2,   4, -18,   3,  19,   4, -13; M0=-10;
/I:         MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=   6, -66,   2,   8, -35,  -2,  -9, -28,  13, -25, -11,  10, -33,   8,   1,  12,   1, -40, -68, -62; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-15; DD=-6;
/M: SY='R';  M=   2,  -1, -10,   4,  -3,  -7,   5, -37,  13,  -8,  -5,  10, -26,  14,  14,  -7,  -8, -11, -68, -11; M0=-5;
/I:         MM=-16; MI=-132; MD=-6; IM=-9; II=-11; DM=-15; DD=-6;
/M: SY='Y';  M=  -9,  -6,  -8,  -6,  18,  16,  11, -22,   1,  -7, -41,  -8, -21,  -4, -34,  -2, -11, -24, -52,  23; M0=-8;
/I:         MM=-2; MI=-32; MD=-126; IM=-18; II=-5; DM=0; DD=-69;
/M: SY='G';  M= -36, -66,  -8, -19, -70,  34, -48, -23,   0, -12, -57,  -7, -16, -16, -14, -21, -21, -18, -68, -28; M0=-19;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-4; DD=-21;
/M: SY='V';  M=  -8, -53, -29, -72,  -3, -25, -59,  23, -23,   1,   5, -24, -17, -24, -27, -14, -15,  26, -58, -14; M0=-16;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=   7, -67,  19,   2, -32, -22, -13, -29,  -2, -11, -57,   6,  21, -10, -19,   8,  -6, -29, -68, -62; M0=-11;
/I:         MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  15, -66,  -8,   7, -17,  -1, -14, -40,   0, -25, -26,  -7,  19,   4,  -2,   6,  -7, -18, -68, -20; M0=-8;
/I:         MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-4; DD=-21;
/M: SY='D';  M=  -1, -67,  16,   7, -32,   0, -15, -22,   3, -17, -57,  14, -62,   6,   3,  11,  -9, -11, -68, -14; M0=-9;
/I:         MM=0; MI=-132; MD=-80; IM=-9; II=-11; DM=-4; DD=-21;
/M: SY='R';  M= -13, -21, -16, -16, -23, -24,  -9, -16,   6, -11,  -6,   3, -33,  18,  31, -24,  -8, -18, -16, -61; M0=-12;
/I:         MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-4; DD=-21;
/M: SY='I';  M= -25, -53, -78, -38,  14, -38, -59,  26, -28,  17,  12, -67, -71, -31, -66, -61, -28,   8,  -8, -28; M0=-29;
/I:         MM=0; MI=-132; MD=-65; IM=-9; II=-11; DM=-4; DD=-21;
/M: SY='T';  M=  -2, -21, -14,   5,  -8, -17,   1,  -1,   2, -12,   0, -10, -62,   2,   5,  13,  14,  -1, -68,   4; M0=-6;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-15;
/M: SY='T';  M=  16, -55, -35, -22,  -8, -29, -24,   8, -26,  -5, -25, -35, -14, -17, -33,  -1,  17,  17,  -6, -10; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-4; DD=-22;
/M: SY='V';  M=   2, -66,  -1,   5, -10, -39,  -9,   8,   8, -14, -23,  -6, -63,   9,  11,  -8, -12,  17, -68, -15; M0=-9;
/I:         MM=0; MI=-132; MD=-70; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=   5, -61, -55, -21, -17,  31, -24, -34, -25, -60, -52, -52, -34, -28, -33,  12, -27, -24,   7,  -4; M0=-23;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-3; DD=-26;
/M: SY='Y';  M=  -1, -21, -24, -16,  15, -15,   5, -66,   9,   0,  11, -18, -25, -20,   4, -35, -17,  -7, -68,  33; M0=-12;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=  -5, -19, -78, -29, -31,  36, -59, -24, -68, -52, -45, -34, -36, -64, -66, -10, -25, -26,  -6, -20; M0=-32;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=   3, -23,  14,  25, -35,  -9, -48, -18,   8, -26, -24, -29, -21,  -7, -19,   4, -20, -24, -68,   3; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='S';  M=   1, -19,   4,   5,   0, -15, -14, -37,  -8,  -7, -25,  -1, -33,   2,   0,  16,  14, -12, -68,   1; M0=-6;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M= -11, -19,   9,   8, -32, -24,   8, -27,   9, -13,   4,   5, -33,  20,  15, -13,  -9, -15, -14,   4; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M= -11, -66, -51, -32, -17, -24, -48, -66, -16, -11, -23, -14,  39,  -9,  -9, -11, -21, -62, -68, -14; M0=-23;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=   0, -54, -21, -29,  -7, -24, -57,  22,  -7,  10,  -3, -23, -16, -23,  -4, -30, -17,  19, -59, -18; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  22,  11,   3, -10,   0, -11,  -9, -17,  -8, -17, -11,  -3, -25, -16, -19,  -4,   0,  11, -68,  -6; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=  -5, -11,  19, -10, -70,  -9, -15, -27, -15,  -9, -27,   3,  17,  -8,  -8,  12,   7, -10, -68,  -5; M0=-8;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='N';  M=  -1,   1,  -4,   1, -22,   3, -13, -35, -11, -29, -26,  35,  -6,  -3, -23, -18,  -4, -29, -15, -19; M0=-11;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='D';  M=   7, -12,  17,   1, -32,  -8,  11, -28,   6, -17, -25,  11,  -6,  -1, -11,   1,   6, -12, -15, -10; M0=-5;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='T';  M= -10,   1,   6,  -4, -13, -15, -24, -23, -10, -20, -25,   0, -10,  -6, -18,  14,  27, -29,  -6, -29; M0=-9;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  13, -67,   7,  17, -23, -11, -22,  -4,   1, -20, -23,  -5,  14, -10,   2,  -3, -25, -15,  -6, -18; M0=-7;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  13, -67,   5,  21, -70, -25, -14, -15, -21, -16, -57,   4,  -3,   8,  -6,  -1,  -1, -10,  -7, -14; M0=-10;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='G';  M=   5,   3,  -7,  -4, -32,  27,  -6, -67,  -8, -28, -24,   7, -12,  -4,   3,  -7, -27,  -8, -68, -20; M0=-12;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  -8, -23,  -9,  -5, -15, -37,  -5, -14,   2, -33,  -6,   5, -16,  -7,  32, -11, -51,  -5,  18,  -4; M0=-12;
/I:         MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='A';  M=  22, -67, -14,   3, -10, -17,  -9, -18,  -1, -18, -15,   3, -12,   9,   6,   5, -22,  -6, -16, -19; M0=-7;
/I:         MM=0; MI=-132; MD=-57; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='Q';  M=  -3,   7,  -8,   0,  -7, -36, -23,  -4,  18,  -1,   6, -11, -36,  19,  14, -20, -17, -10, -15, -11; M0=-7;
/I:         MM=-4; MI=-21; MD=-142; IM=-23; II=-3; DM=-1; DD=-35;
/M: SY='N';  M= -20, -65,   7, -10, -68, -38, -49, -22, -45, -33, -15,  41, -63, -27, -24, -17, -33, -19, -68, -61; M0=-28;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M= -24, -59, -57, -27, -31, -65, -52, -25, -16, -39, -14, -23, -35,  -7,  40, -36, -21, -15, -63, -28; M0=-28;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M= -21, -77, -65, -21, -82, -37, -56, -27, -16, -76, -68, -33, -73,  -8,  41, -29, -63, -28, -76, -28; M0=-39;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M=  -6, -21, -39, -74, -15, -18, -61,  13, -37, -53, -47, -68, -72, -66, -68, -25,  -9,  34, -60, -56; M0=-34;
/I:         MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M= -21, -66,  14,  32, -33, -38, -24, -21, -15, -23, -24, -14, -62, -27, -24,  -7,  -5,   3, -68, -29; M0=-18;
/I:         MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M=  -4, -52, -78, -71,  17, -38, -58,  30, -35,   2,  -9, -66, -35, -31, -65, -29, -11,  14, -57, -17; M0=-26;
/I:         MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='V';  M= -15, -20, -11,   4,   4, -63,  -4,   8,   2,   0,   2, -14, -32,   1,   3,  -5,   9,  13,   0,   3; M0=-6;
/I:         MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='I';  M= -10,  -5, -35, -71,  12, -29, -58,  23, -18,  11,  -2, -32, -26, -29, -21, -17, -21,  17,   7,   1; M0=-15;
/I:         MM=0; MI=-131; MD=-141; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='K';  M=  -4, -22, -15,  -6,  -7, -15,  -9,   7,  10,   2,   2,   1,   3,   2,   4,  -5,   5,   4, -67,   3; M0=-2;
/I:         MM=0; MI=-130; MD=-140; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='P';  M=  -1, -10,  -6,   2, -11,   5, -46, -10,   6, -13,  -6,   5,  15,   3,   7,   1,   2,  -7, -66, -18; M0=-3;
/I:         MM=0; MI=-128; MD=-139; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='R';  M=  -2, -63,   7,   4,  -3,  -2, -18,  -3,   7, -10, -11,   6,   2,   7,  12,  -5,   2, -10, -65,  -9; M0=-3;
/I:         MM=0; MI=-126; MD=-136; IM=-9; II=-11; DM=-7; DD=-14;
/M: SY='E';  M=  -3, -14,  -2,  12, -29,  -7,  -1, -16,   6, -14, -20,   7,   7,  10,  -1,   6,   0,  -1, -62, -15; M0=-4;
/I:         B0=*; E1=-10;

» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	82 in 82 different sequences
Number of true positive hits	82 in 82 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	2

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Matrix type [info]	protein_domain
Scaling database [info]	reversed
Author [info]	CJA_Sigrist
Feature key [info]	DOMAIN
Feature description [info]	OmpA-like
Version [info]	3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

82 sequences

ARFA_MYCBO  (P65594), ARFA_MYCBP  (A1KH31), ARFA_MYCTO  (P9WIU4),

ARFA_MYCTU  (P9WIU5), LAFU_ECO44  (D3GSC3), LAFU_ECOLI  (Q47154), 
LAFU_VIBPA  (Q03478), MOTB_BACSU  (P28612), MOTB_ECO57  (P0AF07), 
MOTB_ECOLI  (P0AF06), MOTB_HELPJ  (Q9ZL29), MOTB_HELPY  (P56427), 
MOTB_SALTY  (P55892), MOTB_TREPA  (O07887), MOTY_VIBAN  (Q9S3P9), 
MOTY_VIBPA  (P46233), OMP38_ACIB2 (Q6RYW5), OMP38_ACIBT (A3M8K2), 
OMP38_ACIS5 (A0A160PAH3), OMP3_NEIGO  (P07050), OMP40_PORGI (Q9S3R8), 
OMP41_PORGI (Q9S3R9), OMP4_NEIMA  (P0A0V2), OMP4_NEIMB  (P0A0V3), 
OMP52_HAEIF (P38368), OMP53_HAEIF (P45996), OMP5_HAEIN  (P43840), 
OMPA_ATLHE  (P24754), OMPA_BORAV  (Q05146), OMPA_BUCAI  (P57414), 
OMPA_BUCAP  (Q8K9L4), OMPA_CITFR  (P24016), OMPA_ECO57  (P0A911), 
OMPA_ECOLI  (P0A910), OMPA_ESCF3  (B7LNW7), OMPA_ESCFE  (P0C8Z2), 
OMPA_KLEAE  (P09146), OMPA_KLEPN  (P24017), OMPA_SALTI  (Q8Z7S0), 
OMPA_SALTY  (P02936), OMPA_SERMA  (P04845), OMPA_SEROD  (P24755), 
OMPA_SHIBC  (I2BAK7), OMPA_SHIBL  (P0DJO6), OMPA_SHIDY  (P02935), 
OMPA_SHIFL  (A0A2S4N3N0), OMPA_YERPE  (Q8ZG77), OMPA_YERPS  (P38399), 
OMPC_GLUDA  (P84838), PAL_AGRFC   (Q8U9L5), PAL_BRUAB   (P0A3S9), 
PAL_BRUME   (P0A3S7), PAL_BRUSU   (P0A3S8), PAL_BUCBP   (Q89AJ5), 
PAL_ECO57   (P0A913), PAL_ECOLI   (P0A912), PAL_HAEIN   (P10324), 
PAL_LEGPN   (P26493), PAL_PASMU   (Q51886), PAL_PSEAE   (Q9I4Z4), 
PAL_PSEPK   (P0A138), PAL_PSEPU   (P0A139), PAL_RHILO   (Q98F85), 
PAL_RHIME   (Q926C3), PAL_SHIFL   (P0A914), PORF_PSEAE  (P13794), 
PORF_PSEFL  (P37726), PORF_PSESY  (P22263), PSAB_GLOVI  (Q7NFT5), 
TPGA_ACIS5  (A0A160PB22), TPN50_TREPA (P38369), YFIB_ECOLI  (P07021), 
YFIB_PSEAE  (Q9I4L6), YIAD_ECOLI  (P37665), YN58_BRUAB  (P0C536), 
YP57_BRUA2  (Q2YJ83), YTXE_BACSU  (P39064), YTXE_PRIMG  (P46827), 
YU36_BRUME  (Q8YDY8), YU58_BRUSU  (Q9RPX3), ZORB_ECO24  (A7ZI09), 
ZORB_ECOLC  (P0DW02)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
'Partial' sequences

2 sequences

OMP5_GLAPU  (P85410), OMPA_ACTLI  (P80444)

PDB
[Detailed view]

47 PDB

1OAP; 1R1M; 2AIZ; 2HQS; 2K1S; 2KGW; 2L26; 2LBT; 2LCA; 2MQE; 2N48; 2W8B; 2ZOV; 2ZVY; 2ZVZ; 3CYP; 3CYQ; 3IMP; 3NB3; 3S02; 3S03; 3S06; 3S0H; 3S0W; 3S0Y; 3TD3; 3TD4; 3TD5; 4G4Y; 4G4Z; 4G88; 4ZHV; 4ZHW; 4ZHY; 5EAZ; 5EB0; 5EB1; 5NHX; 5U1H; 5Y3Z; 5Y40; 5Y61; 6IKI; 6IKJ; 6IKK; 6YSL; 7F4V
» more