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| Entry: PS51320 |
General information about the entry
| Entry name [info] | TIFY |
| Accession [info] | PS51320 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JUN-2007 CREATED;
10-MAY-2017 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51320 |
| Associated ProRule [info] | PRU00650 |
Name and characterization of the entry
| Description [info] | Tify domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=36; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=33; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1848539; R2=0.0092429; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3274.9877930; R2=1.2482638; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=792; H_SCORE=4264; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=576; H_SCORE=3994; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-12; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='P'; M= 17,-35,-24, 19,-32,-13,-27,-21,-11, 3, -2,-24, 39, 0, 5, 10, 6, 2,-42,-31; /M: SY='P'; M= 11,-35, 2, 16, -5,-16, 14,-20, -3,-25, -9, 12, 35, 5,-23, 19, 14,-19,-42,-26; /M: SY='P'; M= 28,-36, 10, 15,-42, 24,-26,-25,-22,-36,-12, -6, 41, 5,-28, 18,-15,-23,-42,-35; /M: SY='E'; M= 19,-36, 5, 34,-41, 17,-23,-35, 4,-24,-29, 4, 9, 15,-12, 9, 3,-24,-42,-33; /M: SY='T'; M= 15, 9, 0,-11,-37, -7,-27,-27,-14,-32,-27, -5, 23, -6, -3, 33, 37, -1,-46,-32; /M: SY='Q'; M= 27,-34, 10, 19,-40,-16,-22,-33, 9,-27,-27, 13, -5, 29, -1, 17, 12,-20,-43,-31; /M: SY='Q'; M=-24,-48,-20, 2,-48,-31,-15,-25, -6,-35,-23, -3, 46, 87, 18,-15,-14,-37,-38,-28; /M: SY='M'; M=-30,-33,-48,-40, 19,-47,-28, 9,-39, 60, 60,-43,-44,-32,-36,-39,-26, -4,-32,-12; /M: SY='T'; M=-16,-25,-22,-24,-30,-32,-32,-18,-10,-25,-22,-11,-23,-25,-28, -1, 86, 3,-51,-29; /M: SY='I'; M=-28,-39,-49,-46,-11,-52,-43, 75,-41, 26, 29,-40,-38,-37,-43,-37,-23, 14,-36,-19; /M: SY='F'; M=-30,-34,-44,-41, 86,-40,-29, 2,-37, -2, 13,-34,-44,-40,-36, 10,-23, 0,-11, 24; /M: SY='Y'; M=-36,-43,-37,-39, 56,-42, -5,-18,-31,-13,-13,-36,-47,-29,-28,-31,-29,-23, 7,101; /M: SY='N'; M= 5,-37, 15,-10,-43, 44,-19,-42,-16,-41,-11, 44,-32, 34, 4, 5,-20,-38,-44,-33; /M: SY='G'; M=-13,-40, -2,-36,-46, 86,-33,-54,-32,-49,-39,-13,-31,-30,-40,-13,-31,-47,-38,-41; /M: SY='Q'; M=-19,-39,-16, 22,-42,-28, 4,-39, 32,-31,-27,-13,-28, 56, 27, 34, -6,-35,-40,-27; /M: SY='V'; M= -4, 2,-41,-13, -7,-43,-37, 19,-33, -2, 58,-37,-38,-32,-35,-29,-17, 61,-45,-22; /M: SY='C'; M= -5, 56,-34,-34, -2,-37, 20, 8,-30, 11, 7, -1,-42,-28,-17, -5,-14, 16,-26, 52; /M: SY='V'; M= -9,-30,-43,-37, -4,-44,-44, 19,-14, 0, 5,-37,-40,-36,-35,-27, 1, 71,-47,-23; /M: SY='F'; M=-34,-35,-46,-43, 90,-43,-28, -4,-39, 2,-13,-37,-46,-44,-37,-12,-15, -4, -7, 36; /M: SY='D'; M=-27,-40, 75, 19,-46,-25, 17,-45,-15,-45,-39, 47, -1, 3,-23, -1,-18,-44,-59,-32; /I: I=-28; MD=-71; /M: SY='D'; M=-21,-45, 51, 9,-44, 10, 3,-49,-24,-48,-42, 25,-10,-21,-17, 13,-17,-46,-52, -1; D=-28; /I: I=-28; MI=0; MD=-71; IM=0; DM=-71; /M: SY='V'; M=-19, 17,-47,-42, 40,-47,-40, 31,-39, 11, -6,-41,-44,-41,-40,-32,-20, 55,-31, 11; /M: SY='P'; M=-16,-39,-25,-19,-40,-20, 5,-32,-23,-30,-28,-21, 81, 2,-31, 18, 43,-30,-45,-34; /M: SY='P'; M= 31,-39,-25, 6,-41,-26, 24,-29,-19,-34,-26,-26, 71, 4, 2, -5,-20, -4,-43,-33; /M: SY='E'; M=-16,-41, 45, 58,-21,-18,-18,-37,-12,-11,-29, 9,-26, 26,-19, -3,-12,-35,-45,-30; /M: SY='K'; M=-15,-40,-19, 1,-42,-18,-21,-40, 76,-38, -7,-12,-27, 23, 17,-12,-21,-36,-36,-28; /M: SY='A'; M= 54,-27,-37,-30,-28,-25,-39, 13,-31,-15,-15,-31,-34,-29,-34, -7,-15, 45,-43,-30; /M: SY='Q'; M= 7, 2, -2, 30,-43,-10,-19,-24, 23,-35,-26, 4,-29, 58, 19, -9,-22,-21,-40,-30; /M: SY='E'; M= 24,-35, 19, 44,-18,-28,-22,-28, -6, -5,-25, 2, -6,-12, -9, 3, -7,-12,-40,-11; /M: SY='I'; M=-17,-37,-26,-22, 0,-48,-41, 59,-36, 24, -2,-38,-16,-34,-20,-33,-21, 35,-38,-20; /M: SY='M'; M=-27, 0,-44,-38, 17,-25,-26, 24,-23, 36, 78,-19,-40,-29,-32,-34,-24, 2,-32, -1; /M: SY='R'; M=-12,-36, 5, -4, -6,-18, 31,-21, -6, 16, 11,-11,-35, 11, 32, 11, -1, -8,-41,-20; /M: SY='L'; M=-28, -8,-43,-37, 22,-26, 11, 24,-33, 41, 38,-37,-13,-31, -5,-34,-25, 14,-32, 0; /M: SY='A'; M= 58,-27,-33,-27, -2, -9,-32,-19,-27, 9,-17,-26,-33,-25,-17, 6, 2, -3,-37,-26; /M: SY='S'; M= 17,-33, 8,-20,-19, 24,-23,-25, 4,-27,-29, 21,-31, -2, 7, 32, 9,-28,-42,-30; /M: SY='R'; M= 9,-38, -7, 9,-39, 22, 11,-23, 14,-27,-27, 15,-31, 21, 34, 3, -4,-32,-42,-29; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 53 in 51 different sequences |
| Number of true positive hits | 53 in 51 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Feature key [info] | DOMAIN |
| Feature description [info] | Tify |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
51 sequences
GAT17_ORYSJ (Q6Z433 ), GAT18_ORYSI (A2XKR7 ), GAT18_ORYSJ (Q10F25 ), GAT19_ORYSI (B8AR30 ), GAT19_ORYSJ (Q0DNU1 ), GAT20_ORYSJ (Q5Z4U5 ), GAT24_ARATH (Q8GXL7 ), GAT25_ARATH (Q9LRH6 ), GAT28_ARATH (Q8H1G0 ), JAZ1_SOYBN (C6TCZ5 ), JAZ7_SOLLC (Q9M723 ), TI10A_ARATH (Q9LMA8 ), TI10A_ORYSJ (Q84R94 ), TI10B_ARATH (Q9S7M2 ), TI10B_ORYSI (A2YNP2 ), TI10B_ORYSJ (Q8H395 ), TI10C_ORYSI (A2Z1N3 ), TI10C_ORYSJ (Q69P94 ), TI11A_ARATH (Q9LDU5 ), TI11A_ORYSI (A2XD78 ), TI11A_ORYSJ (Q8GSI0 ), TI11B_ARATH (Q9C9E3 ), TI11B_ORYSJ (Q10QW3 ), TI11C_ORYSI (A2XD79 ), TI11C_ORYSJ (Q8GRS2 ), TI11D_ORYSI (A2Z6V9 ), TI11D_ORYSJ (Q7XEZ1 ), TI11E_ORYSI (A2Z6V6 ), TI11E_ORYSJ (Q7XEZ6 ), TI11F_ORYSJ (Q7XEZ4 ), TI11G_ORYSJ (Q94LG1 ), TIF3A_ARATH (Q9M246 ), TIF3B_ARATH (Q9C5K8 ), TIF3_ORYSJ (Q7XPM8 ), TIF4A_ARATH (Q7XA73 ), TIF4B_ARATH (Q8GY55 ), TIF5A_ARATH (Q8LBM2 ), TIF5B_ARATH (O64687 ), TIF5_ORYSI (A2YI92 ), TIF5_ORYSJ (Q69NY7 ), TIF6A_ARATH (Q58G47 ), TIF6A_ORYSI (A2YVF1 ), TIF6A_ORYSJ (Q6ZJU3 ), TIF6B_ARATH (Q9LVI4 ), TIF6B_ORYSJ (Q6ES51 ), TIF7_ARATH (Q8W4J8 ), TIF8_ARATH (Q84MB2 ), TIF8_ORYSJ (Q6Z2K1 ), TIF9_ARATH (Q93ZM9 ), TIF9_ORYSI (A2XSX6 ), TIF9_ORYSJ (Q7XV97 )» more
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