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PROSITE entry PS51437


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PURL: https://purl.expasy.org/prosite/signature/PS51437

Direct ScanProsite submission
General information about the entry

Entry name [info] CG_1
Accession [info] PS51437
Entry type [info] MATRIX
Date [info] 01-FEB-2009 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51437
Associated ProRule [info] PRU00767

Name and characterization of the entry

Description [info] CG-1 DNA-binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=129;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=124;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0244696; R2=0.0096673; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=20944.8886719; R2=6.7052412; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=929; H_SCORE=27174; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=463; H_SCORE=24049; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-23; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 12 in 12 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DNA_BIND
Feature description [info] CG-1
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
12 sequences

CBT_ORYSJ   (Q7XHR2), CMTA1_ARATH (Q9FY74), CMTA1_CAEEL (H2KY84), 
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