PROSITE entry PS51512
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General information about the entry
Entry name [info] | DFDF |
Accession [info] | PS51512 |
Entry type [info] | MATRIX |
Date [info] |
01-MAY-2011 CREATED;
10-MAY-2017 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC51512 |
Associated ProRule [info] | PRU00845 |
Name and characterization of the entry
Description [info] | DFDF domain profile. |
Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=37; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=34; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4585652; R2=0.0060479; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3541.7595215; R2=1.5934267; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=999; H_SCORE=5134; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=669; H_SCORE=4608; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-35; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='N'; M= 17,-102, -29, -3, 3, 4, -24, -34, -65, -53, -91, 41, 29, 29, -7, 27, 17, -6, -3, -39; /M: SY='Q'; M= 3, -59, 1, 8, -34, 4, -7, -53, 4, -60, -93, 29, 29, 42, 25, 7, 23, -30,-109, -96; /M: SY='P'; M= 12,-106, 39, 19, -76, -9, -19, -15, 0, -78, -94, -12, 58, -6, -11, 19, -29, 1, 4, -98; /M: SY='K'; M= 21,-103, 5, 23, -69, -10, -21, -20, 37, -92, -20, 26, 15, 11, 3, -17, 4, 4, -47, -70; /M: SY='P'; M= 16,-102, 6, 16, -41, -22, -56, -21, 25, -16, -61, 24, 30, 5, -20, 18, 20, -33, -7, -95; /M: SY='P'; M= -19,-104, 40, -6,-101, -60, 29, -22, 28, -36, -15, 8, 46, -41, -15, -6, 21, 24,-114, -95; /M: SY='E'; M= 23,-101, -12, 49, -54, -11, -30, 19, -30, -5, 1, -41, 3, -19, -73, -2, 31, -2,-109, -95; /M: SY='K'; M= -45,-104, 4, 19, -54, -73, -56, 2, 55, -47, -28, 17, -2, 42, -24, -28, 9, 28,-108, -57; /M: SY='P'; M= -25, -40, -85, 2, 76, -52, -59, -17, -49, -11, 11, -4, 76, -36, -99, -49, -42, -24, -92, -9; /M: SY='D'; M= 0,-103, 54, 34,-106, -37, -34,-101, 19, -47, 29, 17, 14, 15, -44, 16, 29, -97,-113, -97; /M: SY='E'; M= -10,-104, 19, 61,-108, 21, -88,-102, -17,-103, -97, 7, -8, 30, 5, 6, 26, -13,-111,-100; /M: SY='D'; M= -8,-110, 99, 75,-115, -97, -84,-114, -80,-110,-107, -74, -17, -76, -89, -85, -88,-108,-121,-102; /M: SY='F'; M=-105,-103,-115,-112, 120,-112, -91, -80,-106, -72, -80,-106,-116,-113,-103,-103, -97, -85, -68, 65; /M: SY='D'; M= -97,-109, 120, -63,-117, -93, -82,-115, -84,-114,-112, 37, -97, -84, -93, -84, -86,-112,-133,-101; /M: SY='F'; M=-105,-102,-117,-113, 124,-113, -95, -52,-108, -43, -80,-107,-116,-116,-105,-104, -97, -84, -70, 30; /M: SY='E'; M= 26,-106, -25, 92,-110, -97, -85, -51, -76,-101, -8, -47, -90, 60, -83, -7, -28, -74,-109, -99; /M: SY='S'; M= 32,-100, -43, 22,-108, 22, -90,-105, 26,-104, -97, -48, -94, 33, 5, 54, 20, -97,-108, -98; /M: SY='N'; M= 59, -28, -84, -54,-102, -23, -85, -95, -86, -96, 65, 83, -99, -19, -92, 34, -79, -91,-112, -97; /M: SY='N'; M= -31, -98, -78, -92, -48, -90, -81, -86, -85, 50, -81, 108,-106, -11, -38, -59, -82, -90,-114, -93; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='A'; M= 74, -98, -50, 42,-108, -70, -91,-100, 4, -84, -33, -27, -94, 46, -47, 11, -22, -71,-107, -99; /M: SY='K'; M= -47,-107, -43, 35,-101,-102, -87, -97, 85, 12, 25, -50, -96, 32, 20, -89, -89, -96,-104, -93; /M: SY='F'; M= -21,-101,-116,-111, 119,-111, -98, -50,-108, 17, -77,-107,-114,-114,-105,-102, -96, -81, -75, -54; /M: SY='N'; M= -8,-104, 63, 56,-111, -91, -82,-109, 9,-109,-101, 75, -95, -5, -14, -15, -17,-105,-117,-100; /M: SY='K'; M= -50,-108, -57, 42,-110,-101, -87,-110, 104,-108, -97, -80, -92, -69, 0, -59, -88,-105,-104, -97; /M: SY='E'; M= -32,-109, 27, 61,-103, -24, -38, 17, 16, -10, -38, -62, 19, 51, -15, -21, -47, -72,-109, -96; /M: SY='E'; M= 13,-104, 43, 43,-103, -47, -18, -67, 20, -10, 1, -43, -96, 12, 27, 1, 22, -49,-111, -96; /M: SY='V'; M= 7, -47, -17, 30, -68, -60, -99, 34, -17, 20, -79, -19, -34, -90, -96, 10, -2, 45,-110, -93; /M: SY='W'; M= 11,-104, 2, 19, 51, -97, -26, -13, -13, -35, -56, -24, -34, 22, -54, 34, -64, -12, 89, -25; /M: SY='K'; M= 10,-104, 33, 24, -13, 18, -42, -11, 36, -6, -27, 6, -42, -2, -25, -27, 5, -47,-107, -94; /M: SY='E'; M= -8,-106, 6, 66, -68, -39, 16, -18, 39, -56, -93, -6, -24, 27, -39, -8, -1, -28,-108, -25; /M: SY='Q'; M= 10,-102, -45, -4, 17, -80, -94, 22, 15, 26, 27, -92, -32, 37, -59, 0, 16, -12,-102, -42; /M: SY='E'; M= -10,-104, -22, 45,-102, 32, -35, 1, 6, -38, -26, -2, -56, 17, 9, 3, 25, -33,-108, -46; /M: SY='K'; M= 34,-102, -4, 42,-105, -18, -89, -73, 52, -53, -8, 18, -61, -10, -34, 28, -52, -36,-108, -53; /M: SY='K'; M= -21, -64, 8, 25,-103, 0, 1, -16, 46, -52, -48, 20, -36, 5, -46, 36, 18, -29,-109, -32; /M: SY='D'; M= 5, -48, 56, 10, -4, 25, -11, -49, 5, -33, -62, 0, 8, 10, -50, 0, 1, -34,-110, -95; /M: SY='T'; M= 13,-103, 1, 23, -98, -18, 1, -47, 28, -29, -33, 1, 9, 17, -44, 21, 30, -30,-106, 15; /M: SY='S'; M= -10, -40, -8, 14, -50, -28, -26, -21, 12, -27, -89, 2, 24, -9, 0, 28, 22, 14,-105, 22; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
Total number of hits | 28 in 28 different sequences |
Number of true positive hits | 28 in 28 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
Matrix type [info] | protein_domain |
Scaling database [info] | reversed |
Author [info] | CJA_Sigrist |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Feature key [info] | DOMAIN |
Feature description [info] | DFDF |
Version [info] | 4 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
28 sequences
DCP5L_ARATH (Q9FH77), DCP5_ARATH (Q9C658), EDC3_CHICK (Q5ZLS2), EDC3_DANRE (Q502M5), EDC3_DROME (Q9VVI2), EDC3_HUMAN (Q96F86), EDC3_MACFA (Q4R8V9), EDC3_MOUSE (Q8K2D3), EDC3_PONAB (Q5RDU9), EDC3_SCHPO (O94752), EDC3_XENLA (Q5XH48), EDC3_YEAST (P39998), L14AA_XENLA (A0A8M2), L14AB_XENLA (Q8AVJ2), L14BA_XENLA (Q68FI1), L14BB_XENLA (Q498K9), LS14A_BOVIN (Q3MHF8), LS14A_HUMAN (Q8ND56), LS14A_MOUSE (Q8K2F8), LS14A_PONAB (Q5R4R4), LS14A_XENTR (Q6NVR8), LS14B_HUMAN (Q9BX40), LS14B_MOUSE (Q8CGC4), LS14B_XENTR (Q566L7), LS14H_CAEEL (Q9XW17), LSM14_PLEWA (Q9YH12), SCD6_YEAST (P45978), SUM2_SCHPO (Q9HGL3)» more
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PDB [Detailed view] |
7 PDB
2WAX; 2WAY; 3D3J; 4A53; 4BRU; 6F9S; 6S8S |