PROSITE entry PS51513
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General information about the entry
Entry name [info] | FFD |
Accession [info] | PS51513 |
Entry type [info] | MATRIX |
Date [info] |
01-MAY-2010 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC51512 |
Associated ProRule [info] | PRU00846 |
Name and characterization of the entry
Description [info] | FFD box profile. |
Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=17; /DISJOINT: DEFINITION=PROTECT; N1=2; N2=16; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8480844; R2=0.0086703; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1105.6815186; R2=0.2011173; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=941; H_SCORE=1295; N_SCORE=11.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=422; H_SCORE=1191; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-86; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='P'; M= 1, 16,-142, -40,-148, -25, -46, 1, 36, -28,-136, -69, 77, -34, -82, -16, 38, 16,-157,-146; /M: SY='F'; M= 52, -10,-147,-145, 53, 5, -74, -86, -31, -52, -22, -10, -44,-142, -66, 2, -19, 35,-142, 33; /M: SY='Y'; M=-149,-160, -9,-148, -98,-155,-115,-135,-142,-132,-128,-147,-160,-138,-140,-143,-143,-140,-106, 143; /M: SY='N'; M= -95,-150, 75, -66,-153,-138, 32,-144, 5,-151,-144, 89,-147, 2,-134, 0, -49, 21,-170,-144; /M: SY='K'; M=-141,-157,-134, -14,-157,-148,-136,-157, 104,-156,-144,-129, 49,-120, 40,-136,-136,-153,-151,-145; /M: SY='D'; M= -20,-150, 70, -24,-157, -64,-134,-153, 39,-154,-147, -7,-142, 49, -64, 57, 29,-148,-162,-145; /I: I=-30; MD=-77; /M: SY='K'; M= -72,-172,-157, -76,-176,-163,-160, -47, 64,-174,-166,-149,-164, -45, -26, 49, -16,-167,-177,-166; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='S'; M=-126, -23, 61, -42,-156, 12,-135,-156, -30,-157,-151, 1,-143,-128,-139, 96,-121,-149,-163,-146; /M: SY='F'; M=-153,-149,-166,-161, 131,-160,-145,-126,-156,-118,-128,-154,-164,-167,-153,-152,-145,-132,-118, -96; /M: SY='F'; M=-153,-149,-164,-160, 129,-160,-142,-127,-155,-119,-128,-154,-163,-165,-152,-151,-145,-132,-117, 28; /M: SY='D'; M=-145,-159, 128,-108,-166,-142,-131,-164,-132,-162,-161,-113,-144,-132,-141,-133,-135,-161,-181,-148; /M: SY='N'; M= -63,-144, -12, 22,-153,-133,-131,-150, -35,-154,-146, 90,-143,-127, -81, 68, 50,-146,-165,-146; /M: SY='I'; M=-143,-152,-163,-159,-123,-166,-154, 97,-155, 54, 37,-156,-154,-150,-156,-152,-138,-103,-150,-132; /M: SY='S'; M=-120,-141,-133,-135,-151,-129,-137,-149,-134,-153,-147,-122,-141,-127,-139, 114, 34,-141,-161,-144; /M: SY='C'; M=-131, 119,-143,-143,-147,-142, 29,-149,-139,-148,-144,-133, 9,-139, -3, 74, 4, -33,-163, -7; /M: SY='E'; M=-135,-153, 53, 78,-159, 15, -25,-159,-127,-157,-150, 58,-140, -3,-135, 25, -24,-154,-163,-148; /M: SY='A'; M= 57,-145, -3, 1,-148,-137,-141, -48, -27, -32, 27, -57, 12, 5,-140, 37, 48, -28,-157,-144; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
Total number of hits | 18 in 18 different sequences |
Number of true positive hits | 18 in 18 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Matrix type [info] | protein_domain |
Scaling database [info] | reversed |
Author [info] | CJA_Sigrist |
Feature key [info] | MOTIF |
Feature description [info] | FFD box |
Version [info] | 4 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
18 sequences
DCP5L_ARATH (Q9FH77), DCP5_ARATH (Q9C658), L14AA_XENLA (A0A8M2), L14AB_XENLA (Q8AVJ2), L14BA_XENLA (Q68FI1), L14BB_XENLA (Q498K9), LS14A_BOVIN (Q3MHF8), LS14A_HUMAN (Q8ND56), LS14A_MOUSE (Q8K2F8), LS14A_PONAB (Q5R4R4), LS14A_XENTR (Q6NVR8), LS14B_HUMAN (Q9BX40), LS14B_MOUSE (Q8CGC4), LS14B_XENTR (Q566L7), LS14H_CAEEL (Q9XW17), LSM14_PLEWA (Q9YH12), SCD6_YEAST (P45978), SUM2_SCHPO (Q9HGL3)» more
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PDB [Detailed view] |
1 PDB
6F9S |