PROSITE entry PS51514
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General information about the entry
| Entry name [info] | BRX |
| Accession [info] | PS51514 |
| Entry type [info] | MATRIX |
| Date [info] |
01-DEC-2010 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51514 |
| Associated ProRule [info] | PRU00847 |
Name and characterization of the entry
| Description [info] | BRX domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=56; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=51; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8074477; R2=0.0077273; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=867; N_SCORE=9.5; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=310; N_SCORE=5.2; MODE=1; TEXT='RR'; /DEFAULT: M0=-41; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='K'; M= 28, -80, 13, 21, -86, -70, -66, -83, 50, -83, -75, 14, 17, -55, 28, 30, 12, -76, -88, -76; /M: SY='E'; M= -67, -89, -41, 108, -91, -9, -62, -93, 4, -85, -81, -64, -64, -43, -58, -64, -69, -85, -87, -81; /M: SY='W'; M= -78, -96, -92, -80, -54, -82, -91, -19, 3, -8, -71, 10, -85, -73, 7, -81, -82, -8, 161, -45; /M: SY='I'; M= -68, -80, -90, -87, 11, -93, -88, 83, -83, -44, 37, -81, -82, -82, -85, -75, 9, 57, -83, -62; /M: SY='E'; M= -20, -87, 6, 101, -85, -82, 52, -86, -54, -15, -74, -63, -67, -46, -62, -65, -69, -81, -90, -74; /M: SY='Q'; M= -69, -90, -58, 59, -73, -80, -57, -76, -53, -1, -64, -64, -74, 105, -56, -63, -70, -78, -72, 50; /M: SY='C'; M= 6, 67, 58, -68, 52, -80, 31, 0, -75, -63, -64, -67, -84, -76, -78, -69, -67, 30, -76, 39; /M: SY='E'; M= -68, -88, -43, 108, -85, -84, -62, -83, -51, -2, -73, -66, -66, 10, -60, -66, -69, -79, -87, -78; /M: SY='P'; M= -21, -93, -68, 6, -92, 9, -72, -84, -63, -89, -77, 5, 109, 18, 4, -66, -67, -85, -86, -86; /M: SY='G'; M= -58, -84, -73, -82, -86, 97, 37, -84, -77, -85, -77, -59, -77, -74, -83, -59, -74, 8, -84, -80; /M: SY='V'; M= -59, -74, -87, -82, -63, -87, -90, -30, -80, -50, -52, -82, -85, -82, -82, 15, -57, 101, -96, -70; /M: SY='Y'; M= -79, -86, -84, -85, 65, -88, -55, 16, -78, -19, -55, -82, -91, -76, -75, -77, -73, -60, -42, 117; /M: SY='I'; M= -72, -81, -93, -88, -54, -95, -85, 83, -85, 49, 28, -86, -85, -81, -86, -82, -67, 23, -82, -63; /M: SY='T'; M= -62, -71, -68, -70, -67, -78, -73, -63, -67, 1, -63, -58, -70, -70, -74, -48, 110, -58, -86, 24; /M: SY='L'; M= -72, -79, -82, -82, 34, -87, -74, 22, -79, 49, -49, 28, 16, -78, -81, -76, -66, 42, -74, 31; /M: SY='I'; M= 12, -79, -78, -76, -72, 32, -80, 44, -66, -61, -60, -69, -79, -71, 40, -62, 38, 43, -87, -73; /M: SY='S'; M= 37, -75, -75, -70, -70, -72, -74, 27, -66, 18, -59, -67, -77, -3, 21, 47, 28, -4, -86, -71; /M: SY='H'; M= -21, -80, 5, 5, 15, -79, 63, -60, -70, 55, -53, -69, -82, -65, -14, 34, -65, -63, -78, 20; /I: I=-28; MD=-71; /M: SY='P'; M= 3, -98, -82, -72,-100, -81, -84, -92, 7, -98, -87, -80, 96, -76, -14, 25, -72, -90, -97, -94; D=-28; /I: I=-28; MI=0; MD=-71; IM=0; DM=-71; /M: SY='D'; M= -4, -81, 70, -61, -89, 67, -68, -90, -68, -90, -82, 38, -75, -67, -76, 2, 3, -84, -93, -81; /M: SY='G'; M= -59, -85, 0, -79, -90, 100, 31, -98, -76, -93, -82, -57, -76, -73, -82, -58, -75, -92, -84, -82; /M: SY='T'; M= -4, -78, -66, -1, -80, 43, -72, -3, 7, -75, -70, 14, -73, -64, 26, -55, 69, -22, -88, -76; /M: SY='R'; M= -70, -82, -63, 1, -79, -79, -65, -4, 59, -18, -67, 35, -76, -54, 68, -62, 37, -71, -86, -72; /M: SY='I'; M= -5, -84, 46, 49, -77, -8, -72, 53, 4, -65, -64, -63, -74, 17, -68, -65, 3, -3, -88, -74; /M: SY='L'; M= -76, -79, -91, -84, 35, -92, -77, 5, -85, 82, -40, -90, 16, -80, -83, -84, -71, -49, -75, -57; /M: SY='K'; M= -72, -87, -66, -52, -86, -80, -64, -88, 93, -85, -73, -59, -75, -47, 77, -66, -68, -83, -81, -72; /M: SY='R'; M= -75, 34, -71, -62, -75, -84, 72, -89, -39, -80, -69, -63, -84, -52, 105, -69, -74, -84, -82, 25; /M: SY='V'; M= -64, -76, -92, -86, -59, -93, -90, 42, -84, 22, -46, -87, -87, -84, -85, -77, -61, 89, -90, -67; /M: SY='R'; M= -70, -88, -62, 44, -84, -81, 37, -90, -6, -83, -73, -62, -77, -48, 98, 15, -68, -84, -86, -70; /M: SY='F'; M= -79, -79, -91, -88, 114, -87, -71, -57, -83, -10, -58, -81, -92, -89, -81, 1, -72, -62, -50, 43; /M: SY='S'; M= -55, -75, -60, -64, -83, -60, -63, -83, -56, -86, -77, 52, -75, -55, 40, 95, -49, -77, -91, -74; /M: SY='R'; M= -70, -84, -69, -62, 17, -80, -64, -73, 34, -75, -69, 24, -81, -54, 91, 3, -66, 14, -82, -66; /M: SY='R'; M= -67, -81, -4, 17, 18, -79, -67, -69, 28, 17, -64, -64, -78, -57, 61, 36, 3, -21, -82, -65; /M: SY='M'; M= -4, 58, -78, -70, -70, -82, 33, -6, 16, -9, 80, -69, -81, -63, 56, -68, 2, 4, -87, -67; /I: I=-28; MD=-71; /M: SY='F'; M= -3, -85, -95, -87, 95, -91, -82, -62, -86, -3, -64, -86, -95, 22, -85, -20, -77, -2, -67, -46; D=-28; /I: I=-28; MI=-71; MD=-71; IM=-71; DM=-71; /M: SY='S'; M= -68, 48, -72, -75, -87, 27, -75, -86, -3, -13, -79, 39, -85, -2, -12, 48, 9, -82, -97, -83; D=-28; /I: I=-28; DM=-71; /M: SY='E'; M= 39, -83, 7, 63, -85, 2, -67, -80, -9, -12, -72, 6, 25, 24, -10, -60, -66, -75, -86, -78; /I: I=-21; MI=0; MD=-53; IM=0; DM=-53; /M: SY='Q'; M= -8, -84, 10, -4, -77, 23, 56, 7, -12, -68, 38, -62, -76, 64, -66, -62, 8, 8, 46, -66; /M: SY='Q'; M= -10, -84, -61, 41, 14, -74, 54, -79, 30, -23, -67, -60, -73, 79, -55, 33, -64, -77, -82, -64; /M: SY='A'; M= 90, -71, -74, -66, -82, -60, -75, -68, -69, -73, -67, -69, -75, 27, -72, 8, -59, 6, -85, -77; /M: SY='K'; M= -68, -86, 15, 44, -88, -77, -63, -88, 79, -85, -75, -57, -71, 41, 32, 10, -65, -83, -84, -74; /M: SY='Q'; M= 2, -80, -70, -65, -76, -9, -72, 37, 27, -65, -62, 22, -77, 56, -5, -14, 24, 29, -86, -72; /M: SY='W'; M= -78,-103, -99, -84, -55, 25, -98, -84, -73, -81, -81, -89, -85, -76, 14, -82, -90, -94, 169, -42; /M: SY='W'; M= -79,-102, -94, -82, -52, 0, 44, -83, -72, -78, -77, -87, -85, -73, 10, -82, -89, -92, 165, 29; /M: SY='E'; M= -20, -85, -57, 67, -71, -78, -63, 6, 35, -11, -67, 16, 18, 7, -59, -1, -65, -70, -77, 38; /M: SY='E'; M= 19, -85, 41, 83, -89, -76, -63, -79, -55, -79, -74, -61, -69, 63, -61, -61, -66, -4, -89, -77; /M: SY='N'; M= -70, -76, -45, -62, -85, -60, -52, -84, 34, -91, -77, 120, -79, -56, -57, -54, -56, -86,-100, -79; /M: SY='W'; M= -72, 59, -68, 2, -67, -5, -65, -77, 60, -1, -68, 23, -80, -59, 36, -68, -69, -77, 60, 46; /M: SY='E'; M= 14, -83, 18, 61, -79, 3, 38, 28, -63, -69, -67, -64, -73, 22, -69, 0, -65, 17, -89, -72; /M: SY='R'; M= -70, -88, -68, -58, -86, 28, -65, -90, 70, -86, -74, -60, -77, -51, 88, -65, -71, -85, -82, -73; /M: SY='V'; M= -66, 46, -89, -82, -61, -92, -87, 51, 8, 22, -49, -82, -86, -80, -78, -76, -63, 73, -89, -68; /M: SY='C'; M= -6, 77, -79, -75, 12, -83, 53, -7, -70, 7, 20, -72, -85, -4, 15, -69, 10, -6, -73, 61; /M: SY='Q'; M= -9, -85, -7, 43, -83, -79, 32, 7, 30, -75, -68, -60, -73, 59, 48, -61, 25, -72, -86, -71; /M: SY='K'; M= -69, -85, -62, 40, -73, 2, -65, -71, 61, 1, -66, 17, 18, 27, -54, -66, -67, 1, -78, 27; /M: SY='Y'; M= -75, -87, -70, -70, -49, -81, 84, -72, -63, -67, 38, 6, 22, -62, 32, -68, 8, -74, -60, 98; /M: SY='N'; M= -64, -78, 3, 4, 14, 40, -63, -80, -64, -37, -75, 85, -77, -63, -71, 30, 14, -79, -88, -72; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 23 in 12 different sequences |
| Number of true positive hits | 23 in 12 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 3 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | BRX |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
12 sequences
BRXL1_ARATH (O82281), BRXL1_ORYSJ (Q6YUB8), BRXL2_ARATH (Q8GYL9), BRXL2_ORYSJ (Q6ZIK7), BRXL3_ARATH (Q5HZ09), BRXL3_ORYSJ (Q7XPT0), BRXL4_ARATH (Q8GZ92), BRXL4_ORYSJ (Q84T65), BRXL5_ORYSJ (Q2QWK1), BRX_ARATH (Q17TI5), PRAF1_ARATH (Q947D2), RLM3_ARATH (Q9FT77)» more
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