PROSITE entry PS51645
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General information about the entry
| Entry name [info] | PHR_CRY_ALPHA_BETA |
| Accession [info] | PS51645 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAY-2012 CREATED;
13-FEB-2019 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51645 |
| Associated ProRule [info] | PRU00976 |
Name and characterization of the entry
| Description [info] | Photolyase/cryptochrome alpha/beta domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=130; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=125; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1864769; R2=0.0075523; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=20486.5605469; R2=5.6055365; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=969; H_SCORE=25918; N_SCORE=9.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=572; H_SCORE=23693; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-23; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='M'; M= -8, -49, -10, -17, -68, -9, -11, -42, 31, -74, 60, 3, 12, -8, 6, 14, -3, -45, -98, -83; /M: SY='M'; M= -20, -12, -67, -79, -34, -34, -5, 15, 3, -25, 44, 4, 29, -64, 12, -22, 27, 10, -88, 26; /M: SY='V'; M= 11, -26, -61, -69, -58, -12, -6, 13, -40, -13, -40, 27, -87, 1, -34, 12, 19, 45, -96, -38; /M: SY='I'; M= -30, -74, -98, -92, -49, -57, -22, 56, -91, 55, -12, -93, -94, -87, -91, -86, -73, 44, -63, -43; /M: SY='Y'; M= -54, -5, -92, -89, 32, -95, 45, 4, -86, 3, 17, -87, -94, -84, -85, -72, -65, 55, 40, 70; /M: SY='W'; M= -88,-108,-113, -95, -9, -73,-109, -7, -88, -6, -40,-106, -94, -87, -91, -83, -95, -43, 168, -31; /M: SY='F'; M= -63, -18, -97, -92, 98, -87, 23, -19, -80, 18, 60, -77, -76, -89, -32, -75, -58, -43, -67, -20; /M: SY='R'; M= -68, -74, -49, -51, -80, -49, -18, -57, 27, -58, -32, 0, -67, 26, 93, -14, -12, -70, -33, -40; /M: SY='R'; M= -30, -64, -2, -47, -64, -42, 14, -92, 10, -70, -60, 46, -86, 20, 83, -5, -15, -71, -52, -64; /M: SY='D'; M= -17, -56, 110, -30, -99, -32, -28, -95, -70, -95, -66, -3, -82, -59, -78, -18, -58, -51,-112, -67; /M: SY='L'; M= -81, -68, -95, -85, 21, -97, -30, -34, -85, 81, 12, -92, -87, 19, -27, -79, -73, -34, -82, -45; /M: SY='R'; M= -81, -98, -64, -65, -90, -91, -48, -97, -38, -89, -78, -70, -90, -54, 118, -75, -80, -90, -90, -76; /M: SY='L'; M= -26, -31, -93, -73, -9, -69, -64, 39, -87, 55, -22, -87, -91, -75, -79, -40, 19, 39, -88, -45; /M: SY='H'; M= 5, -66, 24, 13, -24, -41, 86, -31, -19, -49, -61, 13, -70, 18, 17, 3, 4, -41, -96, -28; /M: SY='D'; M= -61, -95, 114, -26, -63, -73, -4, -98, -63, -95, -94, -26, -82, -41, -77, -56, -72, -95, 11, -4; /M: SY='N'; M= -77, -84, -53, -69, -89, -68, 83, -91, -64, -71, -67, 113, -86, -4, -69, -29, -65, -93,-110, -76; /M: SY='P'; M= 9, -77, -43, 12, -35, -60, 28, -47, -21, -36, -50, -58, 84, -15, -2, -29, 16, -49, 61, -38; /M: SY='A'; M= 77, -28, -82, -77, -69, 18, -83, -28, -78, -23, -14, -76, 30, -75, -84, -3, -30, -39, -90, -84; /M: SY='L'; M= -81, -84, -99, -91, 19,-100, -83, -20, -92, 87, -28, -97, -77, -86, -89, -91, -77, -28, -12, -48; /M: SY='H'; M= 21, -25, 0, 10, -2, -69, 50, -2, -28, 8, -36, -5, -84, 3, -34, 3, 0, -23, -7, 33; /M: SY='H'; M= 43, -76, -19, 24, -19, -57, 52, -74, -8, -24, -49, -10, -73, 19, 16, -28, -37, -50, -9, 47; /M: SY='A'; M= 93, -41, -68, -64, -75, -46, -64, -38, -77, -23, -72, -58, -65, -74, -82, -21, -53, -33, -90, -83; /M: SY='C'; M= 35, 58, -77, -63, -54, -58, -8, 26, -58, 20, 2, -39, -80, 4, -32, 17, -22, 14, -47, -34; /M: SY='Q'; M= 19, -58, 11, 43, -74, -42, 4, -76, 17, -51, -49, 11, -70, 54, 23, 2, -2, -71, -44, -51; /M: SY='Q'; M= 7, -42, 8, 11, -45, -37, 26, -29, -15, 5, -5, 25, -66, 27, 14, 26, -1, -40, -19, -23; /M: SY='G'; M= 46, 12, -1, -21, -48, 46, -10, -66, -27, -55, -62, -3, -26, -14, -45, 22, -29, -17, -92, -53; /M: SY='N'; M= -4, -37, 36, 22, -54, -25, -10, -49, 11, -18, -38, 38, 14, 20, 17, -9, -20, -40, -31, -29; /I: I=-11; MD=-27; /M: SY='P'; M= -1, -58, -4, 23, -69, -36, -1, -65, 19, -64, -73, -21, 48, 17, 14, -4, -6, -42, -98, -57; D=-11; /I: I=-11; MI=0; MD=-27; IM=0; DM=-27; /M: SY='V'; M= -54, -61, -84, -83, -16, -91, -77, 28, -82, 44, -3, -81, -98, -78, -82, -89, -75, 64, -65, -48; D=-11; /I: I=-11; DM=-27; /M: SY='I'; M= -24, -24, -45, -41, 3, -94, 3, 50, -38, 47, -45, -85, -65, -33, -30, -56, -33, 30, -35, 10; /M: SY='P'; M= 30, 56, -53, -68, -19, -22, -56, -22, -70, -17, -47, -71, 85, -63, -71, -52, -19, 22, -92, -83; /M: SY='V'; M= -19, 38, -88, -90, 6, -95, -57, 30, -80, 45, -36, -77, -93, -87, -89, -68, -45, 63, -29, -24; /M: SY='Y'; M= -66, -50, -90, -54, 89, -81, -7, -38, -84, -37, -54, -75, -84, -53, -82, -78, -62, -16, 8, 99; /M: SY='C'; M= -37, 74, -80, -90, 5, -46, -19, 59, -87, -2, -40, -21, -69, -60, -90, -55, -18, 52, -33, -37; /M: SY='F'; M= -15, -62, -55, -72, 66, -78, 19, 22, -75, 42, -5, -67, -81, -40, -40, -57, -61, 7, 45, 14; /M: SY='D'; M= -34, 8, 85, 34, -67, -56, -22, -39, -62, -62, -69, 14, 10, -34, -46, -5, 18, -28,-103, -72; /M: SY='P'; M= -30, -55, 18, 19, -79, -52, -22, -55, -11, -61, -53, -37, 101, -18, -13, -21, -7, -61, -94, -65; /M: SY='R'; M= 1, -54, 22, 26, -41, -15, 3, -44, 17, -36, -18, 10, -33, 23, 32, 10, -7, -32, 11, -21; /M: SY='Q'; M= -34, -47, 5, 7, 28, -57, 17, 9, -33, 4, -21, -26, -29, 62, -31, -20, -10, -22, 27, 32; /I: I=-11; MD=-29; /M: SY='W'; M= -14, 0, -34, -18, 30, -54, -30, 7, -33, 22, 3, -38, 21, -30, -33, -22, -19, -19, 95, 13; D=-11; /I: I=-11; MD=-29; /M: SY='Q'; M= 3, -69, 19, 21, -17, 17, 10, -42, 9, -37, -32, 10, -64, 23, 8, -11, -8, -50, -3, 4; D=-11; /I: I=-11; MD=-29; /M: SY='P'; M= 2, -36, 7, -2, -45, -24, -4, -43, -16, -30, -66, -3, 22, 21, -7, -1, -15, -57, 1, -12; D=-11; /I: I=-11; MD=-29; /M: SY='H'; M= -29,-104, -2, -40, -26, -34, 65, -86, -33, -31, -58, -2, 30, -34, -18, -1, -11, -84, 6, -39; D=-11; /I: I=-11; MD=-29; /M: SY='H'; M= -28, -81, 23, -13, -51, -12, 29, -78, -16, -55, -28, 2, 5, -35, -5, -7, -32, -68, 0, -42; D=-11; /I: I=-11; MI=0; MD=-29; IM=0; DM=-29; /M: SY='M'; M= 26, 13, -22, -21, -2, -33, -5, -8, -10, 2, 42, -30, 6, -26, -27, -5, 22, 3, 1, 8; /M: SY='G'; M= 14, -12, -17, -28, -72, 61, -16, -67, -53, -80, -56, 25, -29, -28, -37, 51, 2, -73, -92, -52; /M: SY='P'; M= 21, -55, 35, 13, -76, -3, -33, -35, -3, -24, -54, -20, 60, -10, -7, -3, -11, -24, -66, -12; /M: SY='R'; M= 34, -31, -69, -46, -11, -58, 41, -12, -17, -39, -16, 19, -3, -5, 68, -32, -48, -18, -2, -15; /M: SY='R'; M= -17, -24, -66, -60, -43, -67, 74, -54, 21, -61, -48, -16, -46, 47, 77, 8, -54, -69, -43, -43; /M: SY='W'; M= 17, -34, -66, -45, 15, -53, 33, 3, -6, 2, -25, -37, -78, 12, 26, -44, -28, 16, 82, 24; /M: SY='W'; M= 10, -67, 28, -3, -77, -20, -3, -55, 8, -49, -45, 1, -74, 38, 48, -12, -3, -37, 86, -38; /M: SY='F'; M= -42, -60, -79, -93, 108, -89, -55, -51, -88, -13, -65, -90, -96, -81, -50, -63, -81, -50, 95, 27; /M: SY='L'; M= -32, -58, -94, -68, 5, -95, -50, 39, -54, 61, 57, -89, -91, -48, -29, -74, -45, 10, 14, -8; /M: SY='H'; M= -6, -12, -54, -41, 15, -52, 63, 12, -18, 43, -10, -28, -88, -2, -7, -26, -59, -27, 32, 27; /M: SY='E'; M= -12, -92, 23, 69, -72, -17, 32, -83, -9, -54, -63, -14, -77, 64, 28, -25, -64, -87, -92, -54; /M: SY='S'; M= 23, 49, -73, -69, -87, 37, -3, -81, -58, -77, -80, 4, -65, -20, -33, 69, 14, -51, -44, -75; /M: SY='L'; M= -37, -53, -96, -89, -42, -97, -84, 16, -80, 78, 14, -93, -80, -71, -63, -86, -67, 32, -86, -68; /M: SY='Q'; M= 22, -27, -6, 25, -66, -56, -1, -16, 25, -21, -22, -2, -43, 40, 27, -5, -7, -13, 3, -36; /M: SY='D'; M= 19, -17, 72, 42, -71, -48, 1, -60, -16, -55, -81, 18, -64, 21, -29, 7, -46, -32, -98, -44; /M: SY='L'; M= -53, -82, -94, -77, 20, -96, -63, -1, -81, 80, 9, -33, -65, -84, -87, -74, -33, 7, -82, -53; /M: SY='Q'; M= 8, -52, 41, 4, -78, -27, 10, -40, 31, -78, -45, 26, -80, 45, 40, 5, -32, -59, -28, -46; /M: SY='Q'; M= 8, -42, 9, 39, -65, -26, -3, -47, 32, -44, -66, 10, -47, 53, 22, 5, 3, -65, -91, -63; /M: SY='Q'; M= 7, -86, 17, 37, -71, -45, -24, -81, 13, -58, -30, 25, -68, 51, 18, 40, -1, -67, -57, -66; /M: SY='L'; M= -29, 15, -96, -89, -14, -96, -81, 0, -89, 83, -9, -93, -95, -72, -87, -86, -53, -32, -9, 6; /I: I=-25; MD=-63; /M: SY='R'; M= 32, -62, -21, 25, -58, -35, -1, -56, 30, -54, -38, 5, -60, 29, 46, 2, -30, -50, -92, -62; D=-25; /I: I=-25; MD=-63; /M: SY='E'; M= 20, -89, 9, 43, -82, -26, -30, -72, 41, -45, -38, -12, -40, 34, 13, 4, -7, -72, -93, -71; D=-25; /I: I=-25; MD=-63; /M: SY='L'; M= -31, -35, -60, -32, -21, -88, 22, 0, 5, 51, -5, -42, -91, -16, 48, -52, -44, -30, -66, -1; D=-25; /I: I=-25; MI=0; MD=-63; IM=0; DM=-63; /M: SY='G'; M= -56, -65, 1, -28, -94, 82, 5, -98, -21, -84, -85, 56, -32, 0, -36, -27, -74, -94, -92, -86; /M: SY='I'; M= -4, -59, -78, -80, -45, 21, -10, 60, -58, -11, -31, -47, -83, 19, -45, 41, -18, 11, -63, -52; /M: SY='P'; M= -19, -37, 24, 5, -69, -8, 14, -72, 13, -65, -64, 5, 65, 12, 36, 0, 3, -60, -93, -60; /M: SY='L'; M= -68, -83, -96, -82, 38, -97, -63, -5, -89, 80, -17, -93, -36, -73, -66, -76, -49, -18, -56, 3; /M: SY='H'; M= -24, -19, -53, -40, 14, -78, 47, 33, -55, 27, -8, -26, -55, -23, -32, -35, -14, 28, 32, 43; /M: SY='V'; M= -36, 5, -84, -59, 4, -95, -64, 46, -67, 29, -5, -87, -30, -58, -81, -61, -5, 64, -57, -1; /M: SY='R'; M= -14, -31, -72, -17, 30, -66, 3, -2, -22, 35, -2, -79, -65, -20, 55, -30, -28, 1, -15, 14; /M: SY='H'; M= -29, -11, -10, 19, -22, -69, 51, -15, 14, -28, -38, -22, -33, 20, 35, -1, 12, 3, -18, 22; /M: SY='G'; M= -11, -1, -10, -10, -46, 82, -26, -49, -53, -59, -53, -40, -38, -30, -51, -13, -33, -15, -57, -7; /I: I=-11; MD=-28; /M: SY='D'; M= -24, -51, 57, 30, -66, -32, -3, -61, 6, -60, -57, 21, 24, -5, -2, 16, 5, -69, -98, -34; D=-11; /I: I=-11; MD=-28; /M: SY='P'; M= 19, -71, 12, -20, -30, -28, -29, -34, -37, -57, -28, -31, 83, -42, -37, -3, 15, -24, -21, -61; D=-11; /I: I=-11; MD=-28; /M: SY='E'; M= 0, -39, -11, 34, 12, -31, -28, -4, -12, -7, -43, -29, 13, -16, -12, -19, -8, 7, 1, -2; D=-11; /I: I=-11; MI=0; MD=-28; IM=0; DM=-28; /M: SY='E'; M= -3, -68, 54, 57, -84, -25, -5, -57, -1, -56, -49, 6, -17, 24, -9, 1, 5, -31, -71, -65; /M: SY='V'; M= 14, 1, -34, 2, -26, -56, -33, 30, -35, 0, -32, -39, -74, -10, -18, -13, 5, 53, -31, -20; /M: SY='L'; M= -32, -67, -84, -90, 33, -80, -87, 50, -88, 60, -18, -91, -56, -86, -60, -69, -50, 32, -22, -63; /M: SY='P'; M= 5, -44, -10, 21, -43, -34, -24, -24, 13, -13, -24, -23, 67, 14, -5, 8, -11, -15, -90, -55; /M: SY='Q'; M= 15, -78, 17, 43, -49, -22, -6, -74, 21, -59, -36, -3, -48, 48, 30, 3, -17, -52, -25, -17; /M: SY='L'; M= -31, -55, -95, -66, 39, -73, -41, 34, -88, 66, -10, -90, -93, -74, -66, -71, -29, 4, 15, -1; /M: SY='C'; M= 46, 64, -54, -52, -8, -70, -12, 26, -20, 4, -22, -63, -77, -28, -39, -14, -13, 27, -39, -62; /I: I=-14; MI=0; MD=-36; IM=0; DM=-36; /M: SY='Q'; M= -2, -51, -4, 30, -95, -39, 1, -47, 29, -36, -61, 3, -44, 41, 22, 0, -18, -68, -98, -62; D=-14; /I: I=-14; DM=-36; /M: SY='E'; M= 1, -68, 0, 46, -57, -32, -32, -58, 20, -42, -71, -5, -69, 43, 8, 7, -3, -53, -96, -44; D=-14; /I: I=-14; DM=-36; /M: SY='W'; M= -17, -35, -50, -30, 5, -40, 52, -20, -15, 8, -67, -5, -33, 6, -17, -12, 8, -5, 64, 51; D=-14; /I: I=-14; DM=-36; /M: SY='G'; M= -35, -90, 30, 2, -66, 49, 20, -94, 21, -67, -54, 42, -13, 29, -9, -4, -49, -91, -70, -51; D=-14; /I: I=-14; DM=-36; /M: SY='A'; M= 58, -21, -61, -64, -15, -57, -90, 54, -71, -33, -40, -68, -22, -73, -80, -48, -38, 40, -3, -57; D=-14; /I: I=-14; DM=-36; /M: SY='T'; M= 11, -6, 37, 7, -46, -5, -6, -52, 1, -55, -68, 14, -64, 11, -12, 29, 40, -32, -96, -68; D=-14; /I: I=-14; DM=-36; /M: SY='H'; M= 39, -12, -2, 8, -64, -23, 49, -32, -3, -20, -22, -13, -71, 8, 9, -3, 11, -10, -49, -25; D=-14; /I: I=-14; DM=-36; /M: SY='V'; M= -57, -62, -88, -91, -32, -99, -94, 49, -90, 35, -26, -92, -73, -75, -91, -83, -64, 77, -92, -60; D=-14; /I: I=-14; DM=-36; /M: SY='Y'; M= -50, -23, -89, -82, 57, -50, 32, 7, -76, -14, -33, -83, -92, -83, -65, -38, 7, 36, 42, 76; D=-14; /I: I=-14; DM=-36; /M: SY='W'; M= 25, 53, -87, -83, 39, -51, -26, -28, -80, -23, 20, -65, -69, -65, -42, 8, 34, 5, 86, 13; /M: SY='N'; M= -21, -50, 51, 14, -63, -50, 55, -66, -53, -68, -61, 81, -40, 8, -54, 17, -8, -80,-103, -55; /M: SY='R'; M= -1, -56, -1, 33, 16, -45, 22, -20, 18, -39, -15, -42, -52, 30, 53, -20, -14, -45, -57, -19; /M: SY='E'; M= -25, -5, 60, 62, -27, -16, 13, -38, -55, -37, -24, -10, -35, 5, 2, -2, -42, -44, -69, -28; /M: SY='Y'; M= -21, -14, -40, -23, -14, -56, -33, 8, -68, -32, -30, -66, 48, -42, -66, -29, 15, 6, 21, 92; /M: SY='E'; M= -20, 8, 6, 51, -83, 34, -33, -56, -59, 8, 0, -33, -21, -30, -33, -4, 35, -25, -71, -81; /M: SY='P'; M= -22, -55, -33, -23, -3, -12, 4, -15, -2, -22, -60, -11, 70, -26, 25, 2, -12, -5, 22, -2; /M: SY='Y'; M= -7, -65, 33, 27, 20, -38, -2, -10, -35, -27, -45, 30, 13, -29, -42, -36, -26, -33, 31, 62; /M: SY='E'; M= 21, -55, -26, 66, -26, 2, 10, -38, -34, -29, -66, -28, -9, 0, -28, 0, -33, -23, 42, -9; /M: SY='R'; M= -28, -31, -34, -35, -41, -62, -28, 5, 16, 7, -24, -19, -32, 31, 64, -24, 24, -10, -24, -49; /M: SY='Q'; M= 10, -33, 4, 32, -6, -47, -12, -46, 21, -37, -37, 0, -55, 42, 40, -2, -17, -42, -25, 5; /M: SY='R'; M= -15, -78, -10, -4, -22, -49, -36, -22, -29, -23, -5, -51, -65, 23, 77, -32, -14, -1, 77, -37; /M: SY='D'; M= -34, -52, 84, 25, -65, -69, -18, -22, -28, -27, -66, -45, -75, -3, 33, -42, -20, -12, 17, -6; /M: SY='D'; M= 17, -61, 49, 30, -89, -54, 11, -33, 28, -38, -58, 10, -74, 34, 23, -22, -8, -46, -94, -58; /I: I=-26; MI=0; MD=-67; IM=0; DM=-67; /M: SY='Q'; M= 35, -86, 8, 16, -59, -43, 11, -40, 17, -42, -47, -1, -71, 44, 37, 0, 0, -41, -47, -28; /M: SY='V'; M= -9, -48, -82, -74, -29, -85, -90, 48, -87, 42, -4, -89, -73, -54, -79, -67, -36, 65, -49, -49; /M: SY='K'; M= 32, -28, -39, 17, -56, -41, -19, -24, 44, -28, -19, -20, -62, 26, 31, -13, -14, -11, -20, -22; /M: SY='K'; M= 20, -51, 14, 31, -90, -31, -4, -75, 45, -59, -51, 2, -40, 36, 19, 19, -7, -57, -92, -62; /M: SY='W'; M= 32, -30, -39, 2, 11, -39, -19, -10, 6, -2, -7, -24, -59, 12, 19, -3, -14, -7, 62, -22; /I: I=-17; MD=-42; /M: SY='L'; M= -6, 60, -84, -93, 28, -74, -67, -4, -85, 60, -19, -71, -75, -76, -92, -66, -41, -9, 9, -21; D=-17; /I: I=-17; MI=0; MD=-42; IM=0; DM=-42; /M: SY='K'; M= -14, -43, 13, 16, -77, -65, 1, -71, 25, -54, -89, 14, -39, 18, 7, 1, -10, -59, -11, -67; D=-17; /I: I=-17; DM=-42; /M: SY='C'; M= 8, 43, 10, 21, -82, -18, -40, -32, 14, -58, -56, -8, -40, 13, 2, -8, -13, -15,-102, -79; D=-17; /I: I=-17; DM=-42; /M: SY='H'; M= -4, -47, -13, 1, -48, -38, 36, -41, 8, -23, -31, 12, 25, 34, 24, -3, -9, -63, -61, -16; D=-17; /I: I=-17; DM=-42; /M: SY='G'; M= -24, -30, 8, -15, -12, 61, -16, -34, -26, -24, -26, 19, -30, 1, -28, -21, -36, -12, -52, -43; D=-17; /I: I=-17; DM=-42; /M: SY='I'; M= -31, -23, -49, -12, -31, -74, 0, 59, -24, 6, -27, -36, -51, -27, -22, -47, -15, 43, -42, 4; D=-17; /I: I=-17; DM=-42; /M: SY='Q'; M= 4, -28, 12, 38, -44, -30, 5, -36, 11, -52, -45, 12, 11, 40, 11, -2, 10, -38, -15, -59; D=-17; /I: I=-17; DM=-42; /M: SY='V'; M= -20, 6, -73, -83, 41, -66, -36, 34, -75, 7, -30, -78, -72, -77, -64, -49, -12, 63, 54, -19; D=-17; /I: I=-17; DM=-42; /M: SY='H'; M= -56, -38, 45, 27, -42, -58, 52, -21, 18, -51, -66, -11, 11, 22, 15, -8, -2, -8, -37, -10; /M: SY='S'; M= 14, 10, -41, 9, 14, -5, -33, -42, -41, 4, -32, -22, -37, -8, -27, 35, 31, -13, 26, -13; /M: SY='H'; M= -49, -11, -25, -42, 60, -37, 66, -19, -37, -13, -56, 18, -58, -18, -19, -13, -13, -1, 41, 47; /M: SY='N'; M= -12, -1, 14, 11, -40, -15, 31, -51, -15, -35, -17, 44, 25, 19, 2, 1, -10, -10, 42, -25; /M: SY='D'; M= -5, -18, 46, -31, 8, 23, -33, 4, -62, -15, -25, -13, -22, -3, -56, 14, -2, 18, -36, -29; /M: SY='H'; M= -32, -51, 28, -6, -15, -31, 70, -33, -16, -35, -54, 36, -2, 25, -9, 3, -20, 14, -27, 1; /M: SY='P'; M= -20, 12, 13, -30, -39, -12, 24, -40, -36, 17, -41, -26, 54, -12, -50, -7, 37, -2, -91, -4; /M: SY='L'; M= -24, 23, -54, -52, -6, -66, -19, 22, -54, 54, 1, -56, -38, -45, -39, -22, -18, 27, -25, 17; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 60 in 60 different sequences |
| Number of true positive hits | 60 in 60 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | photolyase/cryptochrome alpha/beta |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
60 sequences
CRY1_AEDAE (Q17DK5), CRY1_ANOGA (Q7PYI7), CRY1_ARATH (Q43125), CRY1_CHICK (Q8QG61), CRY1_DROME (O77059), CRY1_DROPS (Q293P8), CRY1_ERIRU (Q5IZC5), CRY1_HUMAN (Q16526), CRY1_MACFA (Q8WP19), CRY1_MOUSE (P97784), CRY1_RAT(Q32Q86), CRY1_SINAL (P40115), CRY1_SPAJD (Q70AD6), CRY1_SYLBO (Q6ZZY0), CRY2_ARATH (Q96524), CRY2_CHICK (Q8QG60), CRY2_HUMAN (Q49AN0), CRY2_MOUSE (Q9R194), CRY2_RAT(Q923I8), CRY2_VIBCH (Q9KS67), CRYD_ARATH (Q84KJ5), CRYD_DANRE (Q4KML2), CRYD_GIBZE (Q4I1Q6), CRYD_GLOVI (Q7NMD1), CRYD_IDILO (Q5QXE0), CRYD_NATPD (Q3IPX9), CRYD_NEUCR (Q7SI68), CRYD_ORYSJ (Q651U1), CRYD_OSTTA (Q5IFN2), CRYD_RHOBA (Q7UJB1), CRYD_SOLLC (Q38JU2), CRYD_SYNY3 (P77967), CRYD_VIBCH (Q9KR33), CRYD_VIBPA (Q87JP5), CRYD_XENLA (Q75WS4), PHR2_ARATH (Q8LB72), PHRA_AGRFC (A9CJC9), PHR_ALKPO (Q04449), PHR_ARATH (Q9SB00), PHR_BUCAI (P57386), PHR_BUCBP (Q89AJ9), PHR_CARAU (P34205), PHR_ECOLI (P00914), PHR_HALSA (Q9HQ46), PHR_METTH (P12769), PHR_METTM (P58818), PHR_NEUCR (P27526), PHR_ORYSJ (Q6F6A2), PHR_POTTR (Q28811), PHR_SALTY (P25078), PHR_STRGR (P12768), PHR_SYNP6 (P05327), PHR_SYNY3 (Q55081), PHR_THET2 (P61496), PHR_THET8 (P61497), PHR_VIBCH (Q9KNA8), PHR_YEAST (P05066), UVR3_ARATH (O48652), UVR3_ORYSJ (Q0E2Y1), YAT1_SYNP1 (Q05380)» more
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| PDB [Detailed view] |
58 PDB
1DNP; 1IQR; 1IQU; 1NP7; 1OWL; 1OWM; 1OWN; 1OWO; 1OWP; 1QNF; 1TEZ; 1U3C; 1U3D; 2IJG; 2J07; 2J08; 2J09; 2J4D; 2VTB; 3FY4; 3UMV; 4CT0; 4GU5; 4I6E; 4I6G; 4I6J; 4JZY; 4K03; 4K0R; 4MLP; 4U63; 4U8H; 5T5X; 6K8I; 6K8K; 6KX4; 6KX5; 6KX6; 6KX7; 6KX8; 6LUE; 6M79; 6OF7; 6WTB; 6X24; 7D0M; 7D0N; 7D19; 7D1C; 7DLI; 7EJ9; 7UD0; 7V8Y; 7V8Z; 7WVA; 7X0X; 7X0Y; 8DD7 » more |