PROSITE entry PS51841
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General information about the entry
| Entry name [info] | LTD |
| Accession [info] | PS51841 |
| Entry type [info] | MATRIX |
| Date [info] |
25-OCT-2017 CREATED;
25-OCT-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51841 |
| Associated ProRule [info] | PRU01187 |
Name and characterization of the entry
| Description [info] | Lamin-tail (LTD) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=121; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=121; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.7145427; R2=0.0058888; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=1323; N_SCORE=8.5; MODE=1; TEXT='R'; /CUT_OFF: LEVEL=-1; SCORE=983; N_SCORE=6.5; MODE=1; TEXT='R?'; /DEFAULT: M0=-44; D=-150; I=-5; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: I=-150; B1=0; BI=-380; BD=-380; /M: SY='S'; M= -29,-128, -30, 8, -34, -33, -40,-125, -50,-128,-123, -10, -7,-110, -46, 26, 9, -48,-135, -45; /I: I=-150; /M: SY='R'; M= -47,-118, -46, -28, -22, -16, -2,-110, -10, -61,-106, -99, 27, -27, 31, 17, 29, -34, 11, -32; /I: I=-150; /M: SY='T'; M= 1,-110,-105,-103, 5, 1,-102, -16,-100, -35, 17, -25, 12, 4, -23, 25, 34, -42,-109, 14; /I: I=-20; MD=-51; /M: SY='S'; M= 2,-110, -34, -16,-113, -41, -13,-108, -45, -67,-103, -4, 9, 33, -10, 44, 36, -44,-120, -34; D=-20; /I: I=-20; MD=-51; /M: SY='F'; M= 10, 8,-106, -6, 53, -65, 7, -9, -59, -39, -4, -18, -40, 22,-104, -60, -13, 4, -11, 3; D=-20; /I: I=-20; MD=-51; /M: SY='Q'; M= 6,-110, -30, -9,-113, -20, 36,-107, -17, -60, -98, 2, -43, 70, -4, -3, 42, -68,-117,-100; D=-20; /I: I=-20; MD=-51; /M: SY='R'; M= 29,-108,-100, -4, -52,-102,-100, 9, -43, 7, -91, -20, 22, -91, 42, 26, -32, -36,-113,-100; D=-20; /I: I=-20; MD=-51; /M: SY='S'; M= -14,-110, -97, -9,-106, -60, -8, -65, -45,-109,-103, -15, 19, 0, -11, 58, 31, -37, 50, -4; D=-20; /I: I=-20; MD=-51; /M: SY='A'; M= 53,-106, -31, -23,-106, -32, -6,-103, -18, -53, -34, -95, 3, -39,-100, 37, -3, -30,-113, 10; D=-20; /I: I=-20; MD=-51; /M: SY='K'; M= -32,-121,-112,-106, -10,-118, -4, -42, 51, -19, -35, -52, -35,-103, -97, -1, 24, -54, -7,-108; D=-20; /I: I=-20; MD=-51; /M: SY='G'; M= 1, -30, -97, -58,-115, 76,-103,-112, -99,-114,-105, -5, 23, -21,-107, -5, 21, -44,-113,-110; D=-20; /I: I=-20; MI=0; MD=-51; IM=0; DM=-51; /M: SY='N'; M= -51, 3, 37, 16,-113, -21, -25,-109, -30,-111,-103, 57, 43, 5, 6, 10, 14, -50,-120,-105; D=-20; /I: I=-20; DM=-51; /M: SY='V'; M= -93,-103,-118,-112, -48,-120,-113, 50,-109, 43, -70,-113,-113,-108, -61,-104, -90, 73,-112, -91; D=-20; /I: I=-20; DM=-51; /M: SY='S'; M= -7, -31, -51, -6, -46, -40, -31, 33, 22, -15, 4, -50,-102, -6, 9, 40, -10, 4,-111, -95; D=-20; /I: I=-20; DM=-51; /M: SY='I'; M= -62,-108,-119,-116, 8,-121,-115, 98,-111, 13, -69,-110,-109,-108,-114,-106, -92, 1,-104, -86; D=-20; /I: I=-20; DM=-51; /M: SY='N'; M= -7,-102, -22, 15,-104, -94, -45, -24, 6, -60, -95, 58,-100, -9, -19, 52, 15, 12,-117, -99; D=-20; /I: I=-20; DM=-51; /M: SY='E'; M= 0,-108, 9, 98,-108, -35, -85,-108, -75, -52, -98, -42, -30, 20, -12, -21, -52,-102,-108, -18; /I: I=-150; /M: SY='V'; M= 6, 22,-108,-105, -47, -50, -11, 37,-102, -22, -14,-102,-107,-101,-103, -93, -18, 75,-100, 54; /I: I=-12; MD=-29; /M: SY='D'; M= 6, -24, 68, -38,-114,-105, 13,-111, -42, -17, -5, -12,-110, 12, -49, 3, -7,-108,-127, -40; D=-12; /I: I=-12; MD=-29; /M: SY='P'; M= -32, -13, -37, -23,-104,-115, 13, -30,-108, -32, -15,-109, 59, -5,-112, -1, -49, 18,-116, 30; D=-12; /I: I=-12; MD=-29; /M: SY='D'; M= -70,-126, 50, 35,-125, -67,-106,-121, -16, -73, -28, -1,-115, -1, -19, -16, -42, -33, 26,-115; D=-12; /I: I=-12; MI=0; MD=-29; IM=0; DM=-29; /M: SY='S'; M= -19,-129, -53,-122, -50, -32,-122, -27, -47, -77,-115, -14, -2,-120,-125, 14, -33, 10,-130, 11; D=-12; /I: I=-12; DM=-29; /M: SY='N'; M= -20,-132, -32, 19, -40, 7, -9,-129, -65, -76,-123, 29,-126, -44, -67, -68, -42, -49,-134, -16; D=-12; /I: I=-12; DM=-29; /M: SY='G'; M= -38,-134, -59, -16,-138, 54,-122,-140,-114, -77,-127,-110, -31, -8, -1, -24,-120,-134,-134,-130; D=-12; /I: I=-12; MI=0; MD=-29; IM=0; DM=-29; /M: SY='S'; M= -24,-129, -11, -21,-128, -14,-122,-118, -46, -24,-118,-113, 8, -13,-121, 20, -12, -22,-138,-125; D=-12; /I: I=-12; DM=-29; /M: SY='N'; M= -36,-130, -9, -48, -49, -2,-112,-127, -4,-131,-124, 55,-128, -45,-114, -49, -55, -38,-133, 6; D=-12; /I: I=-12; DM=-29; /M: SY='G'; M= 0,-105, -6, -12,-109, 79, -91,-113, -27,-112,-102, 51, -2, 10, -96, -31, -61,-108,-107, -19; D=-12; /I: I=-12; MI=0; MD=-29; IM=0; DM=-29; /M: SY='E'; M= -50, -17, 42, 61,-113,-103, -91,-112, 56, -32,-102, -13, -41, -7, -9, 1, -91,-108,-115,-103; D=-12; /I: I=-12; DM=-29; /M: SY='W'; M=-106,-114,-115,-111, 83,-110, -99, -92,-105, -88, -92, -11,-116, -29,-105, -33, -23, -51, 122, 68; D=-12; /I: I=-12; DM=-29; /M: SY='I'; M= -90,-102,-115,-110, -5,-117,-113, 83,-107, -7, -21,-107,-107,-106,-109,-101, -86, 73,-107, -86; /I: I=-150; /M: SY='E'; M= -52,-107, -42, 85,-105,-105, -42, -26, 16, -67, -93, -86, -92, -5, 49, -86, 19, 7,-110, -97; /I: I=-150; /M: SY='L'; M= -96,-102,-115,-109, 11,-117,-104, 68,-108, 72, -62,-110,-110,-103,-107, -73, -91, -3,-100, -82; /I: I=-150; /M: SY='Y'; M= -19,-104, -87, 47, 30,-102, 10, -1, 28, -63, -87, -89, -98, -2, -17, -10, 31, -26, -90, 68; /I: I=-19; MI=0; MD=-49; IM=0; DM=-49; /M: SY='N'; M= -93, -98, -67, -88,-107, -82, -23,-104, -79,-112, -99, 127,-104, -81, -44, -75, -21, -44,-126,-102; D=-19; /I: I=-19; DM=-49; /M: SY='T'; M= -27,-101, -90, -89, -44, -26, 13, 10, 22, -39, -89, 18, 24, -11, -5, 23, 66, -61,-107, 7; D=-19; /I: I=-19; DM=-49; /M: SY='S'; M= -51, 10, 5, -91,-107, 52, 40,-108, -92,-108,-100, -25, -97, -88, -97, 72, 43,-101,-115, -98; D=-19; /I: I=-19; DM=-49; /M: SY='S'; M= 4,-104, 31, 9,-106, 7, -32,-104, 0, -55, -98, 22, 15, -2, 21, 34, 22, -64,-111, -24; D=-19; /I: I=-19; MI=0; MD=-49; IM=0; DM=-49; /M: SY='K'; M= 5,-104, -83, 35, -54, -36, -27,-100, 50, -52, -93, 18, -96, 39, 26, 13, 11, -21,-106, -21; D=-19; /I: I=-19; MI=0; MD=-49; IM=0; DM=-49; /M: SY='D'; M= 29,-102, 51, 39,-107, -28, -91, -58, -40,-102, -97, -44, 31, -82, -4, 26, 38, -18,-114,-100; /I: I=-150; /M: SY='V'; M= -7,-102, -98, 22, -46,-108, -48, 37, -40, -12, 31, -98,-102, 50, -94, -92, -86, 70,-107, -36; /I: I=-150; /M: SY='D'; M= 1,-103, 92, -48,-110, -89, -84,-105, -84, -70, -15, 56, 2, -26, -48, 37, -49, -64,-122, -99; /I: I=-150; /M: SY='L'; M= -95,-100,-115,-108, 0,-116,-102, 48,-107, 78, 22,-111,-111,-102,-106,-105, -91, 13,-101, -82; /I: I=-150; /M: SY='G'; M= -17,-100, 6, -31,-107, 61, -29,-106, 17,-106, -26, -78, -95, -85, -20, 53, 46, -99,-110, -99; /I: I=-150; /M: SY='G'; M= -18,-105, 40, -9,-111, 83, -15,-114, -35, -71,-103, 48, -98, -41, -97, -39, -91,-109,-110,-103; /I: I=-150; /M: SY='W'; M=-104, 11,-118,-107, 41,-106, 28, -96,-101, -91, -14,-112,-110,-100,-101,-105,-107,-104, 160, 72; /I: I=-150; /M: SY='R'; M= -89,-105, -48, 9, -49, -40, -5, -9, 51, -39, -90, -83, -97, 32, 51, 23, 32, -18, 11, -33; /I: I=-150; /M: SY='L'; M= -95,-102,-115,-109, 6,-117,-104, 64,-107, 67, -12,-110,-110,-103,-107,-104, -90, 26, -1, -34; /I: I=-38; MD=-97; /M: SY='K'; M= -49,-126, -16, 14,-122,-121, -18, -9, 36, -76,-108, -31,-116, 30, 15,-105, -14, -13,-128,-113; D=-38; /I: I=-38; MD=-97; /M: SY='R'; M= -57,-130,-114,-102, -25,-125, 12,-114, -12, -49, -34,-108,-124, 52, 61,-109,-113, -16,-120, 4; D=-38; /I: I=-38; MI=-97; MD=-97; IM=-97; DM=-97; /M: SY='Y'; M=-111,-123,-111, -50,-100,-121, -17, -53, 24, -16, -31, 3,-121, 15, -24, -31, -13, -1,-112, 53; D=-38; /I: I=-38; DM=-97; /M: SY='V'; M= 7,-101, 12, -24, -4, -34, -29, 31, 7, -48, -84, -4, -33, -34, -32, 32, -25, 45,-106, 0; /I: I=-150; /M: SY='D'; M= -5,-105, 89, -75,-111, 17, -84,-109, -83, -62, -32, 69, 1, -84, -2, -18, -85,-106,-121,-101; /I: I=-150; /M: SY='G'; M= -5,-105, 51, 12,-110, 63, -89, -49, -8,-109,-102, 34, -97, -23, 4, 16, -87,-105,-111,-102; /I: I=-150; /M: SY='G'; M= 19,-102, 23, 3, -14, 30, -4, -98, 29, -28, -93, 3, -31, 4, 2, 10, 5, -19,-108, -94; /I: I=-15; MD=-37; /M: SY='P'; M= 6,-105, -22, 13,-103, 29, -94, -61, -27, -41, -95, -22, 35, -20, 24, 26, 25, -13,-109, -13; D=-15; /I: I=-15; MI=0; MD=-37; IM=0; DM=-37; /M: SY='E'; M= 5, -25, -7, 32, -48, -33, 29, -40, -1, -30, -95, 23, -6, 15, 0, -20, 0, 2,-117, -99; D=-15; /I: I=-15; MI=0; MD=-37; IM=0; DM=-37; /M: SY='T'; M= 11, -99, -31, -93, -97, -33, -33, -35, -14, -24, 14, -57, -14, -90, -9, 48, 56, 24,-112, -30; D=-15; /I: I=-15; DM=-37; /M: SY='Y'; M= -23, -15,-104, -38, 64, -76, -24, 10, -95, -43, -82,-100,-109, 20, -22, -27, -55, -12, 57, 93; D=-15; /I: I=-15; DM=-37; /M: SY='T'; M= -9,-102, 1, -5, -35, -98, -90, -41, 27, -50, 7, -27, -58, 42, 35, 15, 53, -7,-108, -37; D=-15; /I: I=-15; DM=-37; /M: SY='F'; M=-100,-102,-116,-110, 89,-115,-100, 36,-108, 56, -69,-109, -27,-109,-107,-105, -50, -55, -86, -21; D=-15; /I: I=-15; DM=-37; /M: SY='P'; M= -38,-110, -16, -26,-110, -41, 15,-104, 1, -56, -99, 9, 95, -89, -52, 36, 9, -60,-114,-104; D=-15; /I: I=-15; DM=-37; /M: SY='P'; M= 2, -29, 22, -2,-108, 22, -3,-102, -8,-106, -99, -2, 46, 4, 10, 21, -23, -5,-112, -26; D=-15; /I: I=-15; MI=0; MD=-37; IM=0; DM=-37; /M: SY='N'; M= -56,-136, 24, -65,-137, -9, -9, -45, -5,-136,-127, 34, -16,-110, 14, -56,-116,-132,-143,-127; D=-15; /I: I=-15; MI=0; MD=-37; IM=0; DM=-37; /M: SY='T'; M= -98,-108,-105, -44, 17, -35, 5, 2,-100, 2, -15, -98, -62, 11, -32, -49, 62, -4,-104, 42; D=-15; /I: I=-15; DM=-37; /M: SY='V'; M= -23,-104, -40, -16, -94,-108, 7, 38, -13, -9, -23, -42, -25, -97, -47, 4, 41, 45,-116, -96; D=-15; /I: I=-15; DM=-37; /M: SY='L'; M= -95,-101,-115,-109, -22,-117,-104, 65,-108, 73, -2,-110,-110,-103,-107,-105, -90, 15,-102, -84; /I: I=-150; /M: SY='Q'; M= 36,-106, -6, 32,-106, -33, 8,-104, 50, -52, -94, -30, 35, 52, 6, -49, -88,-100, -10, -24; /I: I=-150; /M: SY='P'; M= 54,-105, -94, -88,-110, 11, -17,-102, -92,-107, -97, -39, 97, -20, -99, 18, -39, -98,-108,-105; /I: I=-23; MD=-58; /M: SY='G'; M= -84,-107, -90, -67, -71, 85, 53, -41, -8,-109, -98, 20, -99, 33, -4, -35, -94, -84,-107, -98; D=-23; /I: I=-23; MD=-58; /M: SY='Q'; M= 32,-104, 14, 45,-111, 18, 12,-107, 18,-105, -97, -81, -94, 63, -54, 17, -2,-100,-109, -98; D=-23; /I: I=-23; MD=-58; /M: SY='H'; M= -28,-100, -91, -56, -88, -97, 65, -44, 6, -67, -40, -41, -98, -38, -31, 44, 60, 24,-103, 52; D=-23; /I: I=-23; MD=-58; /M: SY='V'; M= -8, -31, -40,-104, 25,-111,-101, 15, -61, 35, -32,-105,-109,-102, -61, -97, -50, 69, -98, 36; D=-23; /I: I=-23; MD=-58; /M: SY='T'; M= -86, -99, -95, -90, -94,-103, -97, -11, 33, 2, -83, -87, -98, -25, 29, 16, 71, 39,-111, -93; D=-23; /I: I=-23; MD=-58; /M: SY='I'; M= -47,-102,-114,-109, 30,-116,-110, 76,-106, 17, -19,-107,-108, -32,-108,-101, -88, 61,-103, -83; D=-23; /I: I=-23; MD=-58; /M: SY='W'; M= 12,-113,-107, -47, -15,-101, 30, -53, -96, -53, -91, -33, 9, -95, -51, -96, -11, -23, 143, 71; D=-23; /I: I=-23; MI=0; MD=-58; IM=0; DM=-58; /M: SY='A'; M= 60, -95, -50, -91, -99, 0, 40, -16, -91, -19, -26, 22, -97, -88, -95, 30, 50, -60,-111, -94; /I: MD=-13; /M: SY='R'; M= 31,-103, 16, -20,-106, 28, -94,-100, 12, -36, -96, -9, -40, -28, 37, 25, -5, -12,-111,-100; D=-5; /I: MD=-13; /M: SY='D'; M= -5,-106, 44, -29,-109, 39, 8, -57, -17, -60, -28, 37, -9, 10, 12, 22, -21, -56,-114,-100; D=-5; /I: MD=-13; /M: SY='A'; M= 58,-103, -9, -3,-110, 29, -18,-104, -25, -68, -97, -30, 19, 28, -95, 0, 12, -63,-111,-103; D=-5; /I: MD=-13; /M: SY='G'; M= -38,-108, 16, -10,-112, 46, -4,-109, 27,-110,-102, 18, -30, -29, 16, -18, 39, -42,-115,-103; D=-5; /I: MD=-13; /M: SY='A'; M= 27,-126,-129, -66, 21, -30, -9, -77, -70, -50, -39,-123, -28,-123,-126, -51, -51, 12,-127, -50; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='S'; M= -60,-128, -3, -16,-129,-116, -18,-125,-113, -20,-120, 17, -28, -8,-118, 47, -47,-124,-141,-123; D=-5; /I: DM=-13; /M: SY='P'; M= 2,-113, 29, -50,-114, -6, -99, -63, -46, -59,-101, -92, 90, -34, 7, -5, 19,-104,-115,-108; D=-5; /I: DM=-13; /M: SY='P'; M= 17,-109, -16, 1,-108, -17, -98, -98, -22, -67, -12, -12, 76, 12, -98, -21, 34, -10,-113, -36; D=-5; /I: DM=-13; /M: SY='W'; M= -4,-113, 36, 4, -19, -62, -29,-113, -13,-112,-108, 9,-107, -31, 5, 18, 33,-109, 74, -98; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='D'; M= -34,-123, 47, -17, -1, -72,-111, -74, -22, -29,-109, -41, -35, 1, -52, -5, -29, 4,-129,-110; D=-5; /I: DM=-13; /M: SY='L'; M= -9,-107, -18,-108, 37, -64,-105, 18,-109, 54, 8,-109, 1,-107,-110,-103, -21, 0,-104, -25; D=-5; /I: DM=-13; /M: SY='V'; M= -39,-114, -21,-109, -26,-116, 28, -11,-107, -50, -92, 9, 1,-107, -42, -39, -40, 56,-111, 48; D=-5; /I: DM=-13; /M: SY='W'; M= 18,-117,-112, -9, 10, -46,-109,-101,-100, -65, 43, -35, -35, -19, 4, -49, -6, -33, 113, -27; D=-5; /I: DM=-13; /M: SY='D'; M= -44,-110, 47, -3,-112, 3, -92, -53, 39,-111,-103, 32,-101, 28, -40, 8, 25,-106,-116, -19; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='Q'; M= 3,-121, -17, -10,-118, -1,-107, -27, -27, -41,-108, 7,-117, 30, -21, 12,-103, -26,-124, -20; D=-5; /I: DM=-13; /M: SY='Q'; M= -6,-120, -52, -3, -8, -66, 15, -47, -92,-113,-105, -16, -57, 77, -2, 9, 2,-111,-120,-104; D=-5; /I: DM=-13; /M: SY='D'; M=-105, -26, 52, -7,-121, -80, -18,-120, -57,-122,-117, 35, -55, -98, -3, 27, 1, -39,-133, -25; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='F'; M= -13,-129,-126, -63, 47, -63,-120, -30,-120, -30, -41, -56, 28, -29, -59, -21, -19,-111,-117, -15; D=-5; /I: DM=-13; /M: SY='S'; M= -34,-106, -96, -93, -22, 7, -98, -3, 23, -51, -94, 14, -33, 35, -24, 38, 28, 5,-113, -99; D=-5; /I: DM=-13; /M: SY='W'; M= -66,-108,-114,-107, 46,-106,-107, -31,-103, 49, -79, -3,-110,-101,-104, -6, -49, -18, 137, -69; D=-5; /I: DM=-13; /M: SY='G'; M= -87,-105, 24, -92, -53, 66, -93,-106, -36, -30, -99, 49, 5, -31, -21, 6, 17, -57, 4,-101; D=-5; /I: DM=-13; /M: SY='F'; M= -23, -15,-119, -41, 40,-120,-119, -15,-115, -16,-101,-113, -59, -24,-119, 10, 28, -1, 10, -99; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='G'; M= -67,-132, 18, -25,-134, 25, -48, -53, -40,-132,-125, -18,-123, 8, 5, -2, -39,-129, -1,-123; D=-5; /I: DM=-13; /M: SY='D'; M= 9,-106, 47, 14,-111, 44, -93, -53, -23,-109,-103, 28, 4, -86, -18, 26, -10, -58,-115,-104; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='D'; M= -49,-106, 89, -4,-113, 11, 22,-113, -84,-112,-105, 55, -98, -19, -20, 20, -30,-109,-123, -99; D=-5; /I: DM=-13; /M: SY='T'; M= 21, 57, -94, 16, -36,-100, -98, -8, -91, -22, -20, -16, -4, -91, -8, -12, 59, 23,-111, -25; D=-5; /I: DM=-13; /M: SY='R'; M= -57,-134,-120, -20,-128, -51,-121, -7, -7,-121,-117, -41,-128, -2, 28, -5, -29, -9, 11,-121; D=-5; /I: DM=-13; /M: SY='T'; M= 10, -98,-103,-101, -89,-105,-105, 41, -98, -10, 39, -95, -33, -98,-103, -46, 70, 47, 9, -92; D=-5; /I: DM=-13; /M: SY='T'; M= 30, -99, -98, -97, -11, -49, -96, 29, -36, -18, -83, 11,-101, -17, -42, -9, 53, 23,-102, 34; D=-5; /I: DM=-13; /M: SY='L'; M= -98,-101,-111,-107, -41,-115, -99, -7,-107, 90, -62, 6,-114,-101,-106,-106, -93, -25,-104, -85; D=-5; /I: DM=-13; /M: SY='Y'; M= -56, 11,-102, -45, 25,-108, -27, -1, 3, 13, -80, -97,-107, -30, 31, -19, 16, 30, -93, 61; D=-5; /I: DM=-13; /M: SY='N'; M= -50,-104, 75, -77,-107, -91, -27,-108, 27, -70,-102, 80,-100, -82, -1, 4, 6,-106,-119, -14; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='P'; M= 33,-104, 10, 25,-110, -18, -92,-106, -8,-108,-100, 14, 61, -39, -31, 46, -5,-100,-112,-103; D=-5; /I: DM=-13; /M: SY='D'; M= -35,-105, 53, 25,-109, -1, 33,-106, -1,-107,-100, 45, -13, 10, -31, 15, 33, -48,-118, -98; D=-5; /I: DM=-13; /M: SY='G'; M= -42,-112, -35, -28,-118, 93, -13,-124, -34,-120,-110, -7,-104, -98, -56, -51,-101,-118,-112,-111; D=-5; /I: MI=0; MD=-13; IM=0; DM=-13; /M: SY='E'; M= -42,-107, 7, 76,-107, -58, -87, -20, -21, -55, -95, 39, -95, 31, 11, -30, 11, -9,-113, -99; /I: I=-150; /M: SY='E'; M= -20,-105, -8, 59, -48,-108, -96, 20, -6, 11, -82, -94, -46, 6, -8, -91, -2, 43,-110, -94; /I: I=-150; /M: SY='V'; M= -39, -28,-108,-100, -86,-112, -34, 50, 4, 7, -13,-101,-106, -38, 23, -96, -11, 64, 11, -32; /I: I=-150; /M: SY='D'; M= 66,-100, 77, -46,-110, -44, -42, -60, -89,-105,-100, -79, -97, -25, -47, 29, -13, -94,-116,-101; /I: I=-150; /M: SY='W'; M= -11,-103, -92, 6, -58, -4, 0, -25, -49, -94, 26, 1, -98, 20, -1, 40, 41, 7, 82, -89; /I: I=-16; MI=0; MD=-41; IM=0; DM=-41; /M: SY='H'; M= -61,-105, -99, -35, 17,-108, 73, -11, -38, 4, -2, -25,-106, -91, 24, -59, 5, 39, -96, 62; /I: I=-150; /M: SY='T'; M= 3,-101, -2, -14,-101, 21, -97, 10, -23, -49, -52, -39, -27, 5, -6, 22, 60, 2,-112, -98; /I: I=-150; /M: SY='Y'; M= -12,-109,-102, -95, 7, -32, -9, -2, -92, -14, 3, -98, 20, 49, -10, -33, -9, 4, 66, 73; /I: I=-150; /M: SY='T'; M= -17,-106, -51, -44,-102, 14, -97, 10, 13, -41, -91, 23, 21, -12, 19, -19, 35, 14,-112, -41; /I: I=-150; /M: SY='D'; M= 22, -22, 42, -47, 1, -33, 29, -64, -8,-104, -98, -22, 9, -8, 30, 16, 26, -64,-113, -55; /I: I=-150; E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 45 in 45 different sequences |
| Number of true positive hits | 45 in 45 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | LTD |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
45 sequences
AV71_ACAVI (Q17107), IFA1_CAEEL (P90901), IFA2_CAEEL (O02365), IFA3_CAEEL (Q21065), IFA4_CAEEL (P90900), IFB1_CAEEL (Q19289), IFB2_CAEEL (Q19286), IFC2_CAEBR (Q5WN60), IFC2_CAEEL (Q21067), IFD1_CAEEL (Q86DC6), IFEA_ASCSU (P23730), IFEA_CORAP (P22488), IFEA_HELPO (P16274), IFEB_ASCSU (P23731), IFP1_CAEEL (Q09501), LAM0_DROME (P08928), LAMC_DROME (Q03427), LMN1_CAEEL (Q21443), LMN1_HYPEX (A0A125S9M4), LMN2_HYPEX (A0A125S9M5), LMNA_CHICK (P13648), LMNA_HUMAN (P02545), LMNA_MOUSE (P48678), LMNA_PIG(Q3ZD69), LMNA_RAT(P48679), LMNA_XENLA (P11048), LMNB1_CHICK (P14731), LMNB1_DICDI (Q54HI5), LMNB1_HUMAN (P20700), LMNB1_MOUSE (P14733), LMNB1_RAT (P70615), LMNB1_XENLA (P09010), LMNB2_CHICK (P14732), LMNB2_HUMAN (Q03252), LMNB2_MOUSE (P21619), LMNB2_XENLA (P21910), LMNB3_XENLA (P10999), LMTD1_HUMAN (Q8N9Z9), LMTD1_MACFA (Q4R899), LMTD1_MOUSE (Q9D4C1), LMTD2_HUMAN (Q8IXW0), LMTD2_MOUSE (Q0VET5), NF70_DORPE (Q01241), OV71_ONCVO (P31732), YVNB_BACSU (O34986)» more
|
| PDB [Detailed view] |
14 PDB
1IFR; 1IVT; 1UFG; 2KPW; 2LLL; 3GEF; 3JT0; 3UMN; 6GHD; 6RPR; 7CRG; 7DTG; 7YVD; 7Z21 » more |