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PROSITE entry PS51884


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PURL: https://purl.expasy.org/prosite/signature/PS51884

Direct ScanProsite submission
General information about the entry

Entry name [info] CHAPLIN
Accession [info] PS51884
Entry type [info] MATRIX
Date [info] 10-APR-2019 CREATED;
10-APR-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51884
Associated ProRule [info] PRU01232

Name and characterization of the entry

Description [info] Chaplin domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=41;
/DISJOINT: DEFINITION=PROTECT; N1=5; N2=37;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5298569; R2=0.0080471; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1426; N_SCORE=14.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=494; N_SCORE=6.5; MODE=1; TEXT='R?';
/DEFAULT: M0=-34; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 11 in 8 different sequences
Number of true positive hits 11 in 8 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Chaplin
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

CHPA_STRCO  (Q8CJY7), CHPB_STRCO  (Q9X7U2), CHPC_STRCO  (Q9AD93), 
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