PROSITE entry PS51903
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General information about the entry
| Entry name [info] | CLP_R |
| Accession [info] | PS51903 |
| Entry type [info] | MATRIX |
| Date [info] |
16-OCT-2019 CREATED;
07-APR-2021 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51903 |
| Associated ProRule [info] | PRU01251 |
Name and characterization of the entry
| Description [info] | Clp repeat (R) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=146; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=141; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3780167; R2=0.0076086; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=15277.9355469; R2=11.7068300; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1002; H_SCORE=27008; N_SCORE=10.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=542; H_SCORE=21623; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-48; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='F'; M= -20,-122,-127,-121, 66,-126,-118, 50, -59, 8, 66,-121, 47, -55,-121, -50, -15, -12,-113, -47; /M: SY='D'; M= -64,-126, 71, 66,-131, -9, -15,-130, -97,-128,-121, 50, -5, 19, -15, -9, -35,-126,-135,-119; /M: SY='K'; M= -53,-126, -26, -14,-125, -87,-102,-124, 82, -63, -10, -14,-115, 62, 58, -20,-106,-121,-122, -54; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='F'; M=-118, -38,-132,-126, 99,-129,-112, -63,-123, 41, 58,-125, -16,-124,-121,-121, -59, -97, 42, 25; /M: SY='T'; M= -99,-110, -13,-106,-117,-112,-113,-109,-104,-113,-110, -18,-108,-107,-112, 34, 115,-101,-135,-113; /M: SY='E'; M= 2,-121, 38, 61,-121,-112, -6, -46, -58, -56,-113, 35, 12, 14, -39, 9, 33, -52, -1, -17; /M: SY='K'; M= 10,-123, -65, 8,-123, -79, 4,-121, 68, -54, 12, -8, -48, 29, 62, -26, -9,-116,-124,-111; /M: SY='A'; M= 71,-112,-119,-113, 32, -88,-117, -95, -63, 10, 12,-112,-118,-111,-116, 15, 11, 30,-120,-105; /M: SY='Q'; M= -2,-127,-109, -21, -52,-116, -31, 7, 14, -44,-105, -14,-117, 94, 25, -9,-108, -32, 94, -35; /M: SY='E'; M= -38,-124, 10, 66,-123, -28,-103, -70, 31, -17, -57, -9, -55, 60, -4, 10, -17, -43,-125, -56; /M: SY='A'; M= 85,-111,-116,-111, -21, -39,-117, -11,-112, -57,-104, -53,-116,-109,-116, 7, 8, 24,-123, -44; /M: SY='I'; M=-112,-119,-131, -66, -20,-135,-122, 72,-125, 70, -7,-127,-127,-120,-125,-122,-108, 12,-120,-101; /M: SY='Q'; M= 42,-118, -6, 23, -76, -47, -29, -27, -25, -43, 21, 31,-115, 56,-106, 13, -18, 16,-125, -26; /M: SY='D'; M= 26,-120, 58, 18, -33, -64, -1,-114, 5, 2, 23, -14,-115, 34, -23, 33, -66,-112,-126, -44; /M: SY='A'; M= 95, -27,-113,-108,-123, -20, -50,-115,-109,-116,-110,-106,-114,-105, -81, 33, -18,-103,-125,-118; /M: SY='Q'; M= -41,-125,-108, -29, 4,-118, -23, -32, -10, -14, -6,-104, -22, 111, -45, -45, -4, 13,-119, -30; /M: SY='S'; M= 9,-118, 15, 54,-123, -77, -54,-116, -9, -46, -24, 13,-111, 31, -19, 58, 11, -25,-129,-115; /M: SY='L'; M= -24,-120,-113, 43, -20,-126, -23, 34, -57, 60, 5, -62,-121, -27, -22, -24,-107, 0,-120, -34; /M: SY='A'; M= 102, 3,-116,-109,-123, -99,-118,-113,-111,-115,-110,-110,-116,-108,-116, -17, -67, -55,-125, -58; /M: SY='R'; M= -39,-124,-112, -22,-114, -70, -30, 6, 35, 8, -12, -48,-120, 50, 60, -4, -52, 22,-125,-110; /M: SY='R'; M= 12,-123, -47, 14,-124, 27, 15,-123, 11, -52, -19, -19,-116, 20, 63, 24, -21, -67,-126,-114; /M: SY='H'; M= 18,-122, -74, -21, -44,-116, 59,-110, -7, 23, 12, 28,-121, -50, 54, 10,-106,-110, -5, 29; /M: SY='G'; M= -29,-124, 43, -32, -50, 55, 16,-130, 36,-127, -39, 40,-116, 14, 21, -12,-107,-126,-128,-116; /M: SY='H'; M=-114,-125, -32, -64,-118, -88, 129,-127, -59, -55,-106, 72,-119, 38,-101, -26,-108,-128,-139, -10; /M: SY='Q'; M= 6,-126, -15, -20,-130, -9, -43,-123, -99,-123,-112, 22, 57, 98,-103, 14, -8,-121,-126, -49; /M: SY='Q'; M= -18,-125, -15, 35, 27,-117, -53, -21, -42, -72, -7, 30,-118, 85,-102, -20, -48, -50,-111, 58; /M: SY='I'; M= -44,-119,-130,-127, 3,-133,-128, 77,-124, 22, -25,-123,-124,-123,-126,-115, 14, 57,-124,-104; /M: SY='E'; M= -43,-122, 46, 72,-124, 16,-108,-121, -61, -50, -48, -98,-110, -49, -23, -16, 60, -70,-131, -45; /M: SY='P'; M= -48,-124,-112, -7,-119, -91, -43, -20,-111, -13,-108,-112, 97,-111,-119, 12, 53, 8,-130,-119; /M: SY='E'; M= 6,-123, -29, 78, -41, -79, -37, -8,-103, 24, -31, -10, 10, -15, -65,-108,-107, 13,-127,-113; /M: SY='H'; M= -13,-128,-102,-102, -64,-118, 150,-132,-106,-117,-103, -39,-118, -2,-101,-106,-115,-131,-147, -88; /M: SY='L'; M= -48,-119,-133,-126, -57,-133,-122, 42,-126, 77, -9,-130,-129,-121,-125,-122,-109, 30, 26,-102; /M: SY='L'; M= 8,-118,-131,-124, 23, -64,-117, -18,-123, 76, 59,-127,-128,-118,-122,-119,-111, -41, 44, -52; /M: SY='K'; M= 13,-119, -54,-109, -38, -81, 10, -45, 45, 43, 31, -48,-120, -27, -36, 30, -63, -16, 38, -20; /M: SY='A'; M= 74, -42,-115, -42, -66, 36,-118, -45,-112,-113,-109,-107,-116, -15,-117, 5, 9, 24,-126,-118; /M: SY='L'; M= -38,-118,-133,-125, 1,-132,-118, 8,-125, 86, 35,-129,-130,-119,-123,-123,-110, -16,-119,-100; /M: SY='L'; M= -83,-119,-133,-126, -20,-133,-120, 32,-125, 81, 20,-129,-130,-120,-124, -68, -66, 12, -5,-101; /M: SY='D'; M= -9,-122, 37, 37, -67, -11, -7, -44, 22, -77, -11, 27,-114, 35, -6, 27, -3, -44,-129, -45; /M: SY='Q'; M= -61,-128, 52, 58,-130, -53,-101,-123, -96, -41, -23, 26, 9, 91,-101, -38, -63, -65,-130,-116; /I: I=-18; MD=-45; /M: SY='P'; M= -51,-132, 20, 38,-134, 10, -23,-130, 5, -59,-122, 0, 59, 21, -28, 11, -17,-128,-134,-124; D=-18; /I: I=-18; MI=0; MD=-45; IM=0; DM=-45; /M: SY='D'; M= -36,-125, 61, 32,-130, 16, -45,-128, -60,-128, -61, 32, -56, 15, -79, 3, 41, -77,-137, -49; D=-18; /I: I=-18; DM=-45; /M: SY='G'; M= -35,-123, -30, -32,-130, 80, -48,-132, -66, -75,-122, -10, -33, -50,-119, 58, -65,-126,-129,-123; D=-18; /I: I=-18; DM=-45; /M: SY='L'; M= -70,-120, -14,-119, 17, -55,-117, 44,-118, 56, -16, -34, -31,-116, -38, 16, -15, 7,-119, -16; /M: SY='A'; M= 61,-116, -58,-117, 27, -24,-120, 33,-118, 25, -96,-116, -63,-116,-121, -48, 11, 6,-119, -35; /M: SY='R'; M= 41, -14, -71,-105, -60, -48, -14, -30, 7, -91,-110, -10, 32, 0, 58, 9, 0, -26, -12, 3; /M: SY='R'; M= -27,-125, -6, -20, -47, -54, -28,-121, 28, -31,-112, 27, 47, 51, 53, 19, -26, -82,-127,-114; /M: SY='I'; M= 26,-119,-129,-124, 7, -39,-124, 61,-123, 47, -88,-123,-125,-120,-124, -68,-107, 33, -4, -41; /M: SY='L'; M= -66, 37,-133,-127, 38,-133,-119, 46,-126, 69, -25,-128,-130,-122,-125,-122,-110, -2,-114, 10; /M: SY='E'; M= 0,-122, 1, 49,-123, -48,-105, -27, 23, -37, 1, 26,-114, 42, 23, -1, 24, -60,-128,-115; /M: SY='K'; M= 17,-123, -5, -64,-124, -25, -13, -62, 68, -85, -35, -23, -48, 30, 42, 23, -33, -58,-124, -41; /M: SY='A'; M= 59, 20,-118, -69, -23, -73,-114, -9,-112, 22, 56, -4,-120, -26, -29, 16, -33, 0,-125,-110; /M: SY='G'; M= -21, -23, -46, 4,-129, 82, 32,-133, -19,-130,-120, 49, -25,-105, -18, -26,-109,-128,-128,-120; /I: I=-14; MI=0; MD=-36; IM=0; DM=-36; /M: SY='V'; M= -9, -63, -50,-122, -55, 22,-124, 53,-120, 12, -41, -41,-123, -38, -71, -65, -23, 63,-126, -50; /M: SY='D'; M= -34,-123, 81, -12,-129, -51, -24,-125, -55,-126, -28, 73, -13, 21, -6, 5, -3, -76,-139,-117; /M: SY='P'; M= -22, 16, -49, -38, -11, -39,-119, 29, -27, 30, -96, -24, 53, -39, -59, -35, -25, 39,-125, -50; /M: SY='D'; M= 4,-125, 58, 28, -51, -11, -65, -44, 29,-122, -80, 3, -1, 38, 18, -22, -11, -66,-128, -38; /M: SY='Q'; M= 45, -41, 10, -24, -75, -38, -49, -66, 27, -12,-108, -29, -48, 45, 21, 11, 11, -61, -27, -48; /M: SY='L'; M= 10,-117,-131,-124, 31,-128,-120, 20,-123, 69, -85,-126,-129,-120, -69, -68,-108, 34,-118, -57; /M: SY='R'; M= -14,-125, -12, 35, -62, -54,-105, -10, 31, 3,-106, -20,-118, 26, 69, -49, -23, -92,-123, -15; /M: SY='Q'; M= -2,-122, 30, 26,-119, -67, -62, -48, 26, 13, -27, -4, -69, 42, 18, 18, 6, -50,-128,-113; /M: SY='E'; M= 41, 43, -9, 58, -76, 1, -43, -68, -36, -37,-111,-106, -64, 18, 18, -13, -45, -6,-128,-117; /M: SY='V'; M= -1, -36,-126,-121, -1,-127,-122, 13,-120, 44, -90, -77, -64, -50,-122,-110, 33, 64,-123, -16; /M: SY='E'; M= -42,-124, 42, 71,-126, -25, -43,-123, -4, -62, -28, 30,-112, 24, -7, 3, 14, -57, -9,-116; /M: SY='K'; M= 5,-121, 30, 18,-122, -61,-107, -82, 37, -27,-110, 11,-116, 32, 22, 33, -28, 13,-129,-114; /M: SY='A'; M= 44, -53,-110, 42, 35,-117, -16, 5, -38, 21, 1, -35, -50, -15, -41, -6, -71, -36,-118, -15; /M: SY='L'; M= -49, -35,-131,-126, -94,-132,-122, 62,-125, 72, -6, -45, -30,-120,-125,-121, -36, -10, -8,-104; /M: SY='D'; M= 9,-123, 63, 24,-128, 29, -23,-124, -2,-125,-118, 44, -60, 8, -13, 4, -80, -24,-133,-118; /M: SY='R'; M= -32,-126, -7, -24,-124, -43, 21,-125, 61, -78,-112, -15,-117, 14, 80, -9, -38, -58,-125, -38; /M: SY='L'; M= -34,-122, -55, -22, -31, 1,-111, 13, -23, 61, 9,-115,-123, 48, -38, -38, -22, -77,-117, 20; /M: SY='P'; M= -14,-134, -26, -57,-130, -73,-114,-121, -84, -78,-117, -9, 120, -2,-119, -30, -26,-123,-127, -37; /M: SY='K'; M= -48,-122, -64, -33,-123, -23, -22,-116, 69, -81, 0, -99, -8, 43, 17, 38, 24, -14,-126,-113; /M: SY='V'; M= 5,-117, -58,-116, -22, -33, -53, -13,-116, -26, 6, -45, -11, 20,-118, -7, -24, 80,-126, 0; /M: SY='S'; M= -27,-119, -31, 20, -24, -46, -44, -56, -6, -18, -52,-101, -17, 46, -35, 65, 32, -5,-126, -67; /M: SY='G'; M= -8,-122, -68, -12, -25, 77, -64,-121, -25,-124,-116, 8, 19, -2,-115, 8, -16, -6,-124, -69; /I: I=-3; MD=-7; /M: SY='S'; M= 7, -38, 13, -27, -57, 22, -68, -25, -23, -67, -21, -28, 39, 1, -68, 45, 22, -17,-129, -53; D=-3; /I: I=-3; MD=-7; /M: SY='G'; M= -19,-124, -12, 25,-128, 46, -39, -37,-109, -94, -58, 35, 34, -4,-116, 26, 23, -51,-132,-122; D=-3; /I: I=-3; MD=-7; /M: SY='G'; M= 14,-126, -3, 10, -55, 34,-119, -23, -10, -61, -28, -67, -76, 19, -61, 6, 12, 12,-133,-121; D=-3; /I: I=-3; MD=-7; /M: SY='Q'; M= 6,-131, 34, 26,-136, -1, 17, -91, -67, -68, -47, 7, -48, 59,-114, 5, -8, -91,-139,-123; D=-3; /I: I=-3; MD=-7; /M: SY='P'; M= -12,-150, -33, -30,-140, -25,-130,-145,-130,-146, -47, 16, 36, 12, -67, -16, -18,-106,-145, 24; D=-3; /I: I=-3; MI=0; MD=-7; IM=0; DM=-7; /M: SY='I'; M= -70,-133,-135,-126, -54, -85,-131, 44,-126, 17, -10,-131, 44, 21, -67,-124, -56, 43,-135,-119; D=-3; /I: I=-3; DM=-7; /M: SY='Y'; M= -61,-129, -56,-108, 8, -71, 6, -77, -22, -53, -35, 15, 57, 54, -22, 7, -15, -66,-110, 76; D=-3; /I: I=-3; DM=-7; /M: SY='L'; M= -19, -3,-129,-123, 46,-128,-118, 27,-123, 49, 22,-125, 40,-121,-124, -62, -58, 10, -23, 15; D=-3; /I: I=-3; DM=-7; /M: SY='S'; M= -21,-115, -38,-108,-124, 26,-111,-122, -74,-125,-118, -2,-113,-103,-113, 91, 50,-114,-132,-117; D=-3; /I: I=-3; DM=-7; /M: SY='P'; M= -17,-127,-105, -5,-125, -14, -16, -67, -21, -76,-114, 36, 60, 50, 59, 16, -70,-122,-126, -21; D=-3; /I: I=-3; DM=-7; /M: SY='S'; M= 27,-123, 40, 34,-126, -35, 11,-126, -30, -96,-117, -60, 0, -8, 45, 46, -37,-119,-130, -44; D=-3; /I: I=-3; DM=-7; /M: SY='L'; M= 27, -40, -75,-120, 5, -77,-118, -29,-121, 73, -12,-121,-126,-117,-122, -14, 5, -19,-121,-104; D=-3; /I: I=-3; DM=-7; /M: SY='Q'; M= 11,-122, 6, 14, -14, -16, -44, -10, 26, -15, 20, 30,-117, 53, -53, -14, -33, -5,-126,-111; D=-3; /I: I=-3; DM=-7; /M: SY='K'; M= 28, -38, -52, -4,-126, -71, -46,-122, 56, -65,-112, 9,-116, 44, 52, 9, -23, -51,-126,-115; D=-3; /I: I=-3; DM=-7; /M: SY='V'; M= 40,-116,-127,-120,-103,-122, -69, 7,-120, 43, -16,-122,-125,-117, -67, -16, -51, 64,-128,-110; D=-3; /I: I=-3; DM=-7; /M: SY='L'; M=-117, -53,-134,-128, 57,-135,-120, 42,-127, 73, -1,-129,-131, -55,-125,-124,-112, -31,-113, -94; D=-3; /I: I=-3; DM=-7; /M: SY='E'; M= -11,-124, 38, 54,-125, -77, -16, -54, 11, -43,-113, 47,-114, 45, -1, -32, 10, -26,-132,-116; D=-3; /I: I=-3; DM=-7; /M: SY='R'; M= 12,-123, 22, -14,-117,-117,-106, -90, 20, 18, -26, 20,-120, 8, 68, -33, -9, -74, -2,-112; D=-3; /I: I=-3; DM=-7; /M: SY='A'; M= 91, 36,-116,-111,-124, -47,-118,-116,-112,-117, -23,-108,-116,-108,-117, 31, -6,-104,-128,-120; D=-3; /I: I=-3; DM=-7; /M: SY='Q'; M= -23,-127, 55, 56, -55, -55, -4, -38, -24, -32, -14, -2,-115, 67, -22, -52, -67, -16, 26,-112; D=-3; /I: I=-3; DM=-7; /M: SY='K'; M= 18,-124, 30, 42, -54, -20, -30, -51, 54,-121,-115, -54,-114, 36, 15, -10, -22, -41,-127,-115; D=-3; /I: I=-3; DM=-7; /M: SY='E'; M= -9,-124,-107, 57, 7,-125, 49, 20, -43, 34, -97, -37,-120, -23, -25, -55, -68, -35,-117, 37; D=-3; /I: I=-3; DM=-7; /M: SY='A'; M= 75,-117,-114,-104,-123, -26,-111,-114, -4,-113, 46, -44,-117, 49, 29, -4,-104, -41,-125,-115; D=-3; /I: I=-3; DM=-7; /M: SY='Q'; M= -37,-125, -22, 4,-124, -39, -21, -42, 58, -35, -67, -11,-116, 67, 52, -2, -33, -32,-125,-112; /M: SY='Q'; M= -27,-124, 23, 34,-126, -90,-104, -75, 52, -34,-112, -5,-114, 59, 38, 21, -13,-119,-127,-114; /M: SY='M'; M= -17,-121,-118, -28, 25, -23, 4, -98, -64, 48, 63, 17,-124, -17, 16, -12,-109, -68, 48, 19; /I: I=-16; MI=0; MD=-41; IM=0; DM=-41; /M: SY='G'; M= -55,-125, -7, 11,-126, 78, -3,-126, 40, -24,-115, -30,-115, 14,-105, -23, -56, -65,-125,-119; /M: SY='D'; M= -23, 17, 112, -29,-131,-114, 54, -62,-104,-127,-124, -88,-117, -55, -31, -63,-107, -61,-147,-114; /M: SY='S'; M= -27,-120, 5, 53,-124, -32,-105,-116, -15, -58,-114, 47,-113, 23, -22, 54, 10, -4,-132,-117; /M: SY='Y'; M=-118,-125,-119, -8, 85,-127, -22, -63, 11, -72,-101,-117,-128, -17, -54, -61,-113, -42, -89, 103; /M: SY='I'; M=-108,-120,-133,-128, -98,-136,-131, 81,-125, 14, -41,-126,-126,-124,-127,-119, -62, 73,-127,-107; /M: SY='S'; M= 31,-115, -51, 5, -60, 20,-110,-121,-105,-122, -27, -98,-113, -43, -29, 83, 26,-112,-128,-116; /M: SY='T'; M= -72, -52,-116,-115,-110, -18,-119, 4,-113, -5, -4,-107, 8, -31,-118, 39, 69, 51,-131,-112; /M: SY='E'; M= -9,-128, 49, 103,-132, -43,-104,-132, -48,-126,-122,-101, -46, -88, -65, -41,-107,-124,-131,-121; /M: SY='H'; M= -88,-126,-107,-105,-110,-121, 131, -36,-105, -9, -32, -21,-120, 26, 5,-107, -2, -17, 15, 8; /M: SY='L'; M=-115,-120,-134,-128, 50,-135,-121, 51,-126, 69, -40,-129,-130,-123,-125,-124,-111, 5, 12, -24; /M: SY='L'; M= -30,-118,-132,-125, 0,-132,-120, 29,-125, 77, 21,-128,-129,-120,-124, -65,-109, 23,-120,-101; /M: SY='L'; M= -27, -51,-128, -46, -42,-131,-117, 33, -68, 75, 5,-125, -72, -30, -17, -92, -53, 3,-120, -35; /M: SY='A'; M= 82,-114,-114,-112,-126, 55,-117,-119,-113,-121,-114,-105,-115,-109,-118, 26,-102, -58,-125,-121; /M: SY='L'; M= 9,-119,-128, -67, 34,-127,-117, 44,-122, 62, 24, -21,-127,-118,-122,-117,-109, -1,-115, -1; /M: SY='W'; M= 30,-118,-126,-120, 30, -56,-117, 15,-117, 43, 51,-118, -54,-115, -46, 2, -2, -15, 62, -35; /I: I=-29; MD=-75; /M: SY='E'; M= -19,-144, 6, 25,-143, -84, -66, -77, 16, -90, -40, -19,-135, -34, 25, -4, -11,-137,-148, -40; D=-29; /I: I=-29; MI=0; MD=-75; IM=0; DM=-75; /M: SY='E'; M= -53,-146, 27, 56, -85, -42,-123, -88,-117, -41, -65, -32, -74, 39, -70, -30, -56, -74,-147, -40; D=-29; /I: I=-29; DM=-75; /M: SY='D'; M= -39,-130, 69, -4,-135, 22,-113,-131, 29,-132,-126, 8, -63, -8, -29, -2, 4, -41,-139,-124; D=-29; /I: I=-29; DM=-75; /M: SY='D'; M= -84, -24, 72, 23,-132, -25, -25,-131, 25,-130,-123, 19, -18, 9, 8, 11, -4, -95,-137, -56; D=-29; /I: I=-29; DM=-75; /M: SY='G'; M= -40, -28, 15, -16, -70, 51,-112,-127, -36,-128, -32, 10, 37,-106, 27, 40, -1, -84,-130, -60; D=-29; /I: I=-29; DM=-75; /M: SY='P'; M= -4, -15, 5, 21, -4, -38,-113, 14, -27, -43,-107, -24, 38, 15, -40, 29, 18, 17,-127,-112; /M: SY='A'; M= 44, -42, -32, -66, -13, 23,-120, 23, -75, 30, -48,-114, 0,-115,-121, -76, 7, 21,-124,-111; /M: SY='A'; M= 36, -23, -63, -33, -37, 34, -1, -67, 3, -48, -2, 10, -62, 17, 21, 31, 4,-113,-125, -45; /M: SY='R'; M= -39,-125, 17, 12,-121, -63, -17, -69, 44, -48, -66, 3, -56, 44, 57, 10, -1, -28,-125, -15; /M: SY='V'; M= -12, -10,-124, -4, -19,-127,-121, 44,-119, 44, -60, -84,-124,-116,-122, -15, -16, 48, 38, -10; /M: SY='L'; M= -31,-118,-129,-122, 51, -72,-115, -26, -22, 77, 24,-124,-129, -52, -61, -31,-110, -58,-113, -59; /M: SY='K'; M= -3,-122, -32, 3, -45, -47, -10, -55, 62, -5, -47, -3, -62, 5, 41, -27, 17, -12,-125,-111; /M: SY='E'; M= 7,-123, 12, 55, -69, -5, -42,-124, 46, -59,-115, 34,-113, 11, -12, 6, -13,-119, -14, -37; /M: SY='Q'; M= 43, -41,-114, -69, 23, -51, 25, -22, -28, 28, -14, 24, -34, 44, -17, -53, -43, -12,-121, -75; /M: SY='G'; M= -12,-123, -26, -58, -59, 84, 20,-129, 4, -64,-117, 18,-117, -13,-113, -6, -34,-124,-123, -12; /M: SY='V'; M= 30, -48,-125,-120, 26, -50,-121, 40, -31, 32, -9, -26, -19,-118, -58,-111, -57, 47,-121,-104; /M: SY='T'; M= -24,-118, 55, 7,-124, -53,-107,-119, -4,-122,-116, 27, -62, -35, -11, 47, 65, -42,-135,-116; /M: SY='P'; M= -1,-123, -34, 37, -34,-117, -67, -4, 38, -9, -5, -81, 44,-100, 9, 23, -23, -10,-123, -11; /M: SY='K'; M= 17,-123, 21, 44,-125, -47, -33, -75, 46, -56,-113, 13, 6, 42, -27, -5, 5, -83,-127, -42; /M: SY='K'; M= 26,-122, 19, 28,-124, -78,-107, -41, 64, -44,-111, 19,-114, 24, 7, -15, -40, -19,-127,-115; /M: SY='L'; M= -7,-119,-131,-125, 14, -57,-121, 49, -74, 64, -17,-125,-127,-120,-123, -59,-108, 29,-119, -45; /M: SY='K'; M= -19,-124, -81, 33,-118, -41,-106, -62, 63, 6, -37, 5, -49, 18, 45, -42, -26, -26,-124, -49; /M: SY='Q'; M= 26,-120, -65, 43, -68, -48,-106,-117, 41, -27,-111, 27,-113, 47, -30, 22, 16, -53,-127,-115; /M: SY='A'; M= 63, -54, -16, 21, -27,-111,-114, -4, -48, -7,-104, -12,-116, 26,-112, -19, 16, 12,-126,-113; /M: SY='I'; M= -8,-121,-129, -34, 6,-131, -31, 81,-123, 25, -13,-124,-124,-120,-125,-117, -57, 43,-122,-103; /M: SY='E'; M= -21,-122, 6, 45,-114,-118, -37, 0, 12, 27, 7, 31, -37, 25, -30, -13, 8, -35,-128,-112; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='Q'; M= 15,-123, -3, 31,-125, -36, -10,-125, 46,-123,-114, 12, -41, 52, 20, 30, -14,-119,-126, -27; /M: SY='M'; M= -40,-119, -77, -24, -45,-128,-120, 47, -73, 42, 59, -54, -16,-116,-121, -29, -29, 52,-125,-106; /M: SY='R'; M= -49,-128, -53, -13,-121,-122, -34, -48, -16, -27,-109, -33,-121, -9, 107, -20, -18, -61,-126,-111; /M: SY='G'; M= -30,-123,-110, -25, -26, 85,-115,-129, 35, -91,-119, -69, -35, -28, -48, 14, -52, -68,-122,-119; /M: SY='G'; M= -51,-122, 20, 29, -52, 68, -44,-127, -32, -91,-119, 47, -23, -55,-112, 28, -35, -46,-129,-120; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 203 in 203 different sequences |
| Number of true positive hits | 203 in 203 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Feature key [info] | DOMAIN |
| Feature description [info] | Clp R |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
203 sequences
CLPAA_SOLLC (P31541), CLPAB_SOLLC (P31542), CLPA_BRANA (P46523), CLPA_ECO57 (P0ABI1), CLPA_ECOL6 (P0ABI0), CLPA_ECOLI (P0ABH9), CLPA_FUSBL (P05444), CLPB1_ARATH (P42730), CLPB1_NOSS1 (Q8YUL9), CLPB1_ORYSJ (Q6F2Y7), CLPB1_PARMW (Q7U637), CLPB1_STRAW (Q82EU9), CLPB1_SYNE7 (P53533), CLPB1_SYNY3 (P74459), CLPB1_THEVB (Q8DJ40), CLPB2_ARATH (F4JVJ1), CLPB2_CHLTE (Q8KA87), CLPB2_NOSS1 (Q8YM56), CLPB2_ORYSJ (Q75GT3), CLPB2_PARMW (Q7U3T3), CLPB2_STRAW (Q826F2), CLPB2_SYNE7 (O34209), CLPB2_SYNY3 (P74361), CLPB2_THEVB (Q8DG71), CLPB3_ARATH (Q9LF37), CLPB3_ORYSJ (Q0E3C8), CLPB4_ARATH (Q8VYJ7), CLPB_ACICA (P82956), CLPB_AGRFC (Q7CU92), CLPB_AQUAE (O67588), CLPB_BACAN (Q81TT4), CLPB_BACC1 (Q73BY1), CLPB_BACCR (Q81GM5), CLPB_BACTN (Q89YY3), CLPB_BDEBA (Q6MIV0), CLPB_BIFLO (Q8G4X4), CLPB_BLOFL (Q7VQF3), CLPB_BORBR (Q7WHB6), CLPB_BORPA (Q7W9E6), CLPB_BORPE (Q7VYV6), CLPB_BRADU (Q89UL2), CLPB_BRUME (Q8YJ91), CLPB_BRUSU (Q7CEG6), CLPB_CAMJE (Q9PI02), CLPB_CAUVC (Q9A9T4), CLPB_CHLCV (Q822Q4), CLPB_CHLMU (Q9PKS5), CLPB_CHLPN (Q7AJA9), CLPB_CHLTR (O84115), CLPB_CHRVO (Q7NWN7), CLPB_CLOAB (Q97KG0), CLPB_CLOPE (Q8XKG8), CLPB_CLOTE (Q898C7), CLPB_CORDI (Q6NF05), CLPB_COREF (Q8FM94), CLPB_CORGL (P53532), CLPB_COXBU (Q83F55), CLPB_DEIRA (Q9RVI3), CLPB_DESVH (Q72AW6), CLPB_DICNO (P17422), CLPB_ECO57 (P63285), CLPB_ECOL6 (P63286), CLPB_ECOLI (P63284), CLPB_ENTFA (Q831Y7), CLPB_FUSNN (Q8RHQ8), CLPB_GEOSL (Q74FF1), CLPB_GLOVI (Q7NFE9), CLPB_HAEDU (Q7VNH1), CLPB_HAEIN (P44403), CLPB_HELHP (Q7VJY3), CLPB_HELPJ (Q9ZMH1), CLPB_HELPY (P71404), CLPB_LACLA (Q9CFF3), CLPB_LACLM (O68185), CLPB_LACPL (Q88VX7), CLPB_LEPBY (O87444), CLPB_LEPIC (Q72QU2), CLPB_LEPIN (Q8F509), CLPB_LISIN (Q929G7), CLPB_LISM4 (G2K265), CLPB_LISMF (Q71XF9), CLPB_LISMO (Q8Y570), CLPB_MEIRU (Q7X2S8), CLPB_MYCBO (P63287), CLPB_MYCLE (Q9CB26), CLPB_MYCPA (Q73T66), CLPB_MYCTO (P9WPD0), CLPB_MYCTU (P9WPD1), CLPB_NEIMA (Q9JTP9), CLPB_NEIMB (Q9JYQ8), CLPB_NITEU (Q82SD8), CLPB_OCEIH (Q8EU05), CLPB_PARUW (Q6MD97), CLPB_PASMU (Q9CKC0), CLPB_PHOLL (Q7N788), CLPB_PHOPR (Q6LMY0), CLPB_PORGI (Q7MVE7), CLPB_PROFC (Q7WSY8), CLPB_PROMA (Q7VBL0), CLPB_PROMM (Q7V8B1), CLPB_PROMP (Q7V2A3), CLPB_PSEAE (Q9HVN5), CLPB_PSEPK (Q88Q71), CLPB_PSESM (Q889C2), CLPB_RALN1 (Q8XZR0), CLPB_RHILO (Q98G96), CLPB_RHIME (Q92MK7), CLPB_RHOBA (Q7UM33), CLPB_RHOPA (Q6N1H2), CLPB_RICBR (Q1RGR1), CLPB_RICCN (Q92JK8), CLPB_RICFE (Q4UN57), CLPB_RICPR (Q9ZEA9), CLPB_RICTY (Q68XR2), CLPB_SALTI (Q7AMH5), CLPB_SALTY (Q7CQ01), CLPB_SHEON (Q8EBE6), CLPB_SHIFL (Q7UBW5), CLPB_STAAC (Q5HHB0), CLPB_STAAM (Q99VB5), CLPB_STAAN (Q7A6G6), CLPB_STAAR (Q6GIB2), CLPB_STAAS (Q6GAV1), CLPB_STAAW (Q8NXE7), CLPB_STAEQ (Q5HQI5), CLPB_STAES (Q8CPT5), CLPB_STRAL (Q9Z6E4), CLPB_STRCO (Q8CJV9), CLPB_STRMU (Q8DTC7), CLPB_THET2 (Q72IK9), CLPB_THET8 (Q9RA63), CLPB_TREDE (Q73K92), CLPB_TREPA (O83110), CLPB_VIBCH (Q9KU18), CLPB_VIBPA (Q87S63), CLPB_VIBVU (Q8DEV2), CLPB_VIBVY (Q7MNK1), CLPB_WOLPM (Q73IE4), CLPB_WOLSU (Q7M9X4), CLPB_XANAC (Q8PHQ4), CLPB_XANCP (Q8P6A0), CLPB_XYLFA (Q9PGC1), CLPB_XYLFT (Q87AX8), CLPB_YEREN (Q9F746), CLPB_YERPE (Q74X11), CLPC1_ARATH (Q9FI56), CLPC1_MYCS2 (A0R574), CLPC1_MYCTO (P9WPC8), CLPC1_MYCTU (P9WPC9), CLPC1_ORYSJ (Q7F9I1), CLPC2_ARATH (Q9SXJ7), CLPC2_ORYSJ (Q2QVG9), CLPC3_ORYSJ (Q53LY0), CLPC_BACSU (P37571), CLPC_CHLMU (Q9PKA8), CLPC_CHLPN (Q9Z8A6), CLPC_CHLTR (O84288), CLPC_CYACA (Q9TM05), CLPC_GUITH (O78410), CLPC_MYCBO (P0A523), CLPC_MYCLE (P24428), CLPC_NEOYE (Q1XDF4), CLPC_PEA(P35100), CLPC_PORPU (P51332), CLPC_STAA3 (Q2FJB5), CLPC_STAA8 (Q2G0P5), CLPC_STAAB (Q2YSD6), CLPC_STAAC (P0C281), CLPC_STAAM (Q99W78), CLPC_STAAN (Q7A797), CLPC_STAAR (Q6GJE4), CLPC_STAAS (Q6GBW3), CLPC_STAAW (Q8NXY8), CLPC_STAEQ (Q5HRM8), CLPC_STAES (Q8CQ88), CLPC_STAHJ (Q4L3I4), CLPC_STAS1 (Q49V34), CLPC_TRICV (P49574), CLPD1_ORYSJ (Q6H795), CLPD2_ORYSJ (Q7XL03), CLPD_ARATH (P42762), CLPT1_ARATH (Q93WL3), CLPT2_ARATH (Q8GW78), CLPV1_PSEAE (Q9I742), CLP_TRYBB (P31543), D53L_ORYSJ (Q2QYW5), D53_ORYSJ (Q2RBP2), HLYB_BRAHO (Q54316), HS104_SCHPO (O94641), HS104_YEAST (P31539), HSP98_NEUCR (P31540), SMAX1_ARATH (Q9FHH2), SMAX1_ORYSJ (Q6Z517), SMXL2_ARATH (Q9M0C5), SMXL3_ARATH (Q9SVD0), SMXL4_ARATH (Q9SZR3), SMXL5_ARATH (Q9LU73), SMXL6_ARATH (Q9LML2), SMXL7_ARATH (O80875), SMXL8_ARATH (F4IGZ2), Y2667_MYCTO (P9WPC6), Y2667_MYCTU (P9WPC7), Y2686_MYCBO (P0A525)» more
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| PDB [Detailed view] |
92 PDB
1K6K; 1KHY; 1KSF; 1LZW; 1MBU; 1MBV; 1MBX; 1MG9; 1QVR; 1R6B; 1R6C; 1R6O; 1R6Q; 2K77; 2Y1Q; 2Y1R; 3J3R; 3J3S; 3J3T; 3J3U; 3PXG; 3PXI; 3WDB; 3WDC; 3WDD; 3WDE; 4D2Q; 4D2U; 4D2X; 4UQW; 4Y0B; 4Y0C; 5GUI; 5HBN; 5KNE; 5OFO; 5OG1; 5U2U; 5VJH; 5VY8; 5VY9; 5VYA; 5WBW; 6AHF; 6AMN; 6CN8; 6DJU; 6DJV; 6ED3; 6EM8; 6EM9; 6EMW; 6N8T; 6N8V; 6N8Z; 6OAX; 6OAY; 6OG1; 6OG2; 6OG3; 6PBA; 6PBQ; 6PBS; 6QS6; 6QS7; 6QS8; 6UCR; 6W1Z; 6W20; 6W21; 6W22; 6W23; 6W24; 6W6E; 6W6G; 6W6H; 6W6I; 6W6J; 7AA4; 7ABR; 7L6N; 7UIV; 7UIW; 7UIX; 7UIY; 7UIZ; 7UJ0; 8A8U; 8A8V; 8A8W; 8AD9; 8B9U » more |