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Entry: PS51903

General information about the entry

Entry name [info] CLP_R
Accession [info] PS51903
Entry type [info] MATRIX
Date [info] 16-OCT-2019 CREATED;
16-OCT-2019 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC51903
Associated ProRule [info] PRU01251

Name and characterization of the entry

Description [info] Clp repeat (R) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=146;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=141;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3780167; R2=0.0076086; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1002; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=542; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-48; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='F';  M= -20,-122,-127,-121,  66,-126,-118,  50, -59,   8,  66,-121,  47, -55,-121, -50, -15, -12,-113, -47;
/M: SY='D';  M= -64,-126,  71,  66,-131,  -9, -15,-130, -97,-128,-121,  50,  -5,  19, -15,  -9, -35,-126,-135,-119;
/M: SY='K';  M= -53,-126, -26, -14,-125, -87,-102,-124,  82, -63, -10, -14,-115,  62,  58, -20,-106,-121,-122, -54;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='F';  M=-118, -38,-132,-126,  99,-129,-112, -63,-123,  41,  58,-125, -16,-124,-121,-121, -59, -97,  42,  25;
/M: SY='T';  M= -99,-110, -13,-106,-117,-112,-113,-109,-104,-113,-110, -18,-108,-107,-112,  34, 115,-101,-135,-113;
/M: SY='E';  M=   2,-121,  38,  61,-121,-112,  -6, -46, -58, -56,-113,  35,  12,  14, -39,   9,  33, -52,  -1, -17;
/M: SY='K';  M=  10,-123, -65,   8,-123, -79,   4,-121,  68, -54,  12,  -8, -48,  29,  62, -26,  -9,-116,-124,-111;
/M: SY='A';  M=  71,-112,-119,-113,  32, -88,-117, -95, -63,  10,  12,-112,-118,-111,-116,  15,  11,  30,-120,-105;
/M: SY='Q';  M=  -2,-127,-109, -21, -52,-116, -31,   7,  14, -44,-105, -14,-117,  94,  25,  -9,-108, -32,  94, -35;
/M: SY='E';  M= -38,-124,  10,  66,-123, -28,-103, -70,  31, -17, -57,  -9, -55,  60,  -4,  10, -17, -43,-125, -56;
/M: SY='A';  M=  85,-111,-116,-111, -21, -39,-117, -11,-112, -57,-104, -53,-116,-109,-116,   7,   8,  24,-123, -44;
/M: SY='I';  M=-112,-119,-131, -66, -20,-135,-122,  72,-125,  70,  -7,-127,-127,-120,-125,-122,-108,  12,-120,-101;
/M: SY='Q';  M=  42,-118,  -6,  23, -76, -47, -29, -27, -25, -43,  21,  31,-115,  56,-106,  13, -18,  16,-125, -26;
/M: SY='D';  M=  26,-120,  58,  18, -33, -64,  -1,-114,   5,   2,  23, -14,-115,  34, -23,  33, -66,-112,-126, -44;
/M: SY='A';  M=  95, -27,-113,-108,-123, -20, -50,-115,-109,-116,-110,-106,-114,-105, -81,  33, -18,-103,-125,-118;
/M: SY='Q';  M= -41,-125,-108, -29,   4,-118, -23, -32, -10, -14,  -6,-104, -22, 111, -45, -45,  -4,  13,-119, -30;
/M: SY='S';  M=   9,-118,  15,  54,-123, -77, -54,-116,  -9, -46, -24,  13,-111,  31, -19,  58,  11, -25,-129,-115;
/M: SY='L';  M= -24,-120,-113,  43, -20,-126, -23,  34, -57,  60,   5, -62,-121, -27, -22, -24,-107,   0,-120, -34;
/M: SY='A';  M= 102,   3,-116,-109,-123, -99,-118,-113,-111,-115,-110,-110,-116,-108,-116, -17, -67, -55,-125, -58;
/M: SY='R';  M= -39,-124,-112, -22,-114, -70, -30,   6,  35,   8, -12, -48,-120,  50,  60,  -4, -52,  22,-125,-110;
/M: SY='R';  M=  12,-123, -47,  14,-124,  27,  15,-123,  11, -52, -19, -19,-116,  20,  63,  24, -21, -67,-126,-114;
/M: SY='H';  M=  18,-122, -74, -21, -44,-116,  59,-110,  -7,  23,  12,  28,-121, -50,  54,  10,-106,-110,  -5,  29;
/M: SY='G';  M= -29,-124,  43, -32, -50,  55,  16,-130,  36,-127, -39,  40,-116,  14,  21, -12,-107,-126,-128,-116;
/M: SY='H';  M=-114,-125, -32, -64,-118, -88, 129,-127, -59, -55,-106,  72,-119,  38,-101, -26,-108,-128,-139, -10;
/M: SY='Q';  M=   6,-126, -15, -20,-130,  -9, -43,-123, -99,-123,-112,  22,  57,  98,-103,  14,  -8,-121,-126, -49;
/M: SY='Q';  M= -18,-125, -15,  35,  27,-117, -53, -21, -42, -72,  -7,  30,-118,  85,-102, -20, -48, -50,-111,  58;
/M: SY='I';  M= -44,-119,-130,-127,   3,-133,-128,  77,-124,  22, -25,-123,-124,-123,-126,-115,  14,  57,-124,-104;
/M: SY='E';  M= -43,-122,  46,  72,-124,  16,-108,-121, -61, -50, -48, -98,-110, -49, -23, -16,  60, -70,-131, -45;
/M: SY='P';  M= -48,-124,-112,  -7,-119, -91, -43, -20,-111, -13,-108,-112,  97,-111,-119,  12,  53,   8,-130,-119;
/M: SY='E';  M=   6,-123, -29,  78, -41, -79, -37,  -8,-103,  24, -31, -10,  10, -15, -65,-108,-107,  13,-127,-113;
/M: SY='H';  M= -13,-128,-102,-102, -64,-118, 150,-132,-106,-117,-103, -39,-118,  -2,-101,-106,-115,-131,-147, -88;
/M: SY='L';  M= -48,-119,-133,-126, -57,-133,-122,  42,-126,  77,  -9,-130,-129,-121,-125,-122,-109,  30,  26,-102;
/M: SY='L';  M=   8,-118,-131,-124,  23, -64,-117, -18,-123,  76,  59,-127,-128,-118,-122,-119,-111, -41,  44, -52;
/M: SY='K';  M=  13,-119, -54,-109, -38, -81,  10, -45,  45,  43,  31, -48,-120, -27, -36,  30, -63, -16,  38, -20;
/M: SY='A';  M=  74, -42,-115, -42, -66,  36,-118, -45,-112,-113,-109,-107,-116, -15,-117,   5,   9,  24,-126,-118;
/M: SY='L';  M= -38,-118,-133,-125,   1,-132,-118,   8,-125,  86,  35,-129,-130,-119,-123,-123,-110, -16,-119,-100;
/M: SY='L';  M= -83,-119,-133,-126, -20,-133,-120,  32,-125,  81,  20,-129,-130,-120,-124, -68, -66,  12,  -5,-101;
/M: SY='D';  M=  -9,-122,  37,  37, -67, -11,  -7, -44,  22, -77, -11,  27,-114,  35,  -6,  27,  -3, -44,-129, -45;
/M: SY='Q';  M= -61,-128,  52,  58,-130, -53,-101,-123, -96, -41, -23,  26,   9,  91,-101, -38, -63, -65,-130,-116;
/I:         I=-18; MD=-45;
/M: SY='P';  M= -51,-132,  20,  38,-134,  10, -23,-130,   5, -59,-122,   0,  59,  21, -28,  11, -17,-128,-134,-124; D=-18;
/I:         I=-18; MI=0; MD=-45; IM=0; DM=-45;
/M: SY='D';  M= -36,-125,  61,  32,-130,  16, -45,-128, -60,-128, -61,  32, -56,  15, -79,   3,  41, -77,-137, -49; D=-18;
/I:         I=-18; DM=-45;
/M: SY='G';  M= -35,-123, -30, -32,-130,  80, -48,-132, -66, -75,-122, -10, -33, -50,-119,  58, -65,-126,-129,-123; D=-18;
/I:         I=-18; DM=-45;
/M: SY='L';  M= -70,-120, -14,-119,  17, -55,-117,  44,-118,  56, -16, -34, -31,-116, -38,  16, -15,   7,-119, -16;
/M: SY='A';  M=  61,-116, -58,-117,  27, -24,-120,  33,-118,  25, -96,-116, -63,-116,-121, -48,  11,   6,-119, -35;
/M: SY='R';  M=  41, -14, -71,-105, -60, -48, -14, -30,   7, -91,-110, -10,  32,   0,  58,   9,   0, -26, -12,   3;
/M: SY='R';  M= -27,-125,  -6, -20, -47, -54, -28,-121,  28, -31,-112,  27,  47,  51,  53,  19, -26, -82,-127,-114;
/M: SY='I';  M=  26,-119,-129,-124,   7, -39,-124,  61,-123,  47, -88,-123,-125,-120,-124, -68,-107,  33,  -4, -41;
/M: SY='L';  M= -66,  37,-133,-127,  38,-133,-119,  46,-126,  69, -25,-128,-130,-122,-125,-122,-110,  -2,-114,  10;
/M: SY='E';  M=   0,-122,   1,  49,-123, -48,-105, -27,  23, -37,   1,  26,-114,  42,  23,  -1,  24, -60,-128,-115;
/M: SY='K';  M=  17,-123,  -5, -64,-124, -25, -13, -62,  68, -85, -35, -23, -48,  30,  42,  23, -33, -58,-124, -41;
/M: SY='A';  M=  59,  20,-118, -69, -23, -73,-114,  -9,-112,  22,  56,  -4,-120, -26, -29,  16, -33,   0,-125,-110;
/M: SY='G';  M= -21, -23, -46,   4,-129,  82,  32,-133, -19,-130,-120,  49, -25,-105, -18, -26,-109,-128,-128,-120;
/I:         I=-14; MI=0; MD=-36; IM=0; DM=-36;
/M: SY='V';  M=  -9, -63, -50,-122, -55,  22,-124,  53,-120,  12, -41, -41,-123, -38, -71, -65, -23,  63,-126, -50;
/M: SY='D';  M= -34,-123,  81, -12,-129, -51, -24,-125, -55,-126, -28,  73, -13,  21,  -6,   5,  -3, -76,-139,-117;
/M: SY='P';  M= -22,  16, -49, -38, -11, -39,-119,  29, -27,  30, -96, -24,  53, -39, -59, -35, -25,  39,-125, -50;
/M: SY='D';  M=   4,-125,  58,  28, -51, -11, -65, -44,  29,-122, -80,   3,  -1,  38,  18, -22, -11, -66,-128, -38;
/M: SY='Q';  M=  45, -41,  10, -24, -75, -38, -49, -66,  27, -12,-108, -29, -48,  45,  21,  11,  11, -61, -27, -48;
/M: SY='L';  M=  10,-117,-131,-124,  31,-128,-120,  20,-123,  69, -85,-126,-129,-120, -69, -68,-108,  34,-118, -57;
/M: SY='R';  M= -14,-125, -12,  35, -62, -54,-105, -10,  31,   3,-106, -20,-118,  26,  69, -49, -23, -92,-123, -15;
/M: SY='Q';  M=  -2,-122,  30,  26,-119, -67, -62, -48,  26,  13, -27,  -4, -69,  42,  18,  18,   6, -50,-128,-113;
/M: SY='E';  M=  41,  43,  -9,  58, -76,   1, -43, -68, -36, -37,-111,-106, -64,  18,  18, -13, -45,  -6,-128,-117;
/M: SY='V';  M=  -1, -36,-126,-121,  -1,-127,-122,  13,-120,  44, -90, -77, -64, -50,-122,-110,  33,  64,-123, -16;
/M: SY='E';  M= -42,-124,  42,  71,-126, -25, -43,-123,  -4, -62, -28,  30,-112,  24,  -7,   3,  14, -57,  -9,-116;
/M: SY='K';  M=   5,-121,  30,  18,-122, -61,-107, -82,  37, -27,-110,  11,-116,  32,  22,  33, -28,  13,-129,-114;
/M: SY='A';  M=  44, -53,-110,  42,  35,-117, -16,   5, -38,  21,   1, -35, -50, -15, -41,  -6, -71, -36,-118, -15;
/M: SY='L';  M= -49, -35,-131,-126, -94,-132,-122,  62,-125,  72,  -6, -45, -30,-120,-125,-121, -36, -10,  -8,-104;
/M: SY='D';  M=   9,-123,  63,  24,-128,  29, -23,-124,  -2,-125,-118,  44, -60,   8, -13,   4, -80, -24,-133,-118;
/M: SY='R';  M= -32,-126,  -7, -24,-124, -43,  21,-125,  61, -78,-112, -15,-117,  14,  80,  -9, -38, -58,-125, -38;
/M: SY='L';  M= -34,-122, -55, -22, -31,   1,-111,  13, -23,  61,   9,-115,-123,  48, -38, -38, -22, -77,-117,  20;
/M: SY='P';  M= -14,-134, -26, -57,-130, -73,-114,-121, -84, -78,-117,  -9, 120,  -2,-119, -30, -26,-123,-127, -37;
/M: SY='K';  M= -48,-122, -64, -33,-123, -23, -22,-116,  69, -81,   0, -99,  -8,  43,  17,  38,  24, -14,-126,-113;
/M: SY='V';  M=   5,-117, -58,-116, -22, -33, -53, -13,-116, -26,   6, -45, -11,  20,-118,  -7, -24,  80,-126,   0;
/M: SY='S';  M= -27,-119, -31,  20, -24, -46, -44, -56,  -6, -18, -52,-101, -17,  46, -35,  65,  32,  -5,-126, -67;
/M: SY='G';  M=  -8,-122, -68, -12, -25,  77, -64,-121, -25,-124,-116,   8,  19,  -2,-115,   8, -16,  -6,-124, -69;
/I:         I=-3; MD=-7;
/M: SY='S';  M=   7, -38,  13, -27, -57,  22, -68, -25, -23, -67, -21, -28,  39,   1, -68,  45,  22, -17,-129, -53; D=-3;
/I:         I=-3; MD=-7;
/M: SY='G';  M= -19,-124, -12,  25,-128,  46, -39, -37,-109, -94, -58,  35,  34,  -4,-116,  26,  23, -51,-132,-122; D=-3;
/I:         I=-3; MD=-7;
/M: SY='G';  M=  14,-126,  -3,  10, -55,  34,-119, -23, -10, -61, -28, -67, -76,  19, -61,   6,  12,  12,-133,-121; D=-3;
/I:         I=-3; MD=-7;
/M: SY='Q';  M=   6,-131,  34,  26,-136,  -1,  17, -91, -67, -68, -47,   7, -48,  59,-114,   5,  -8, -91,-139,-123; D=-3;
/I:         I=-3; MD=-7;
/M: SY='P';  M= -12,-150, -33, -30,-140, -25,-130,-145,-130,-146, -47,  16,  36,  12, -67, -16, -18,-106,-145,  24; D=-3;
/I:         I=-3; MI=0; MD=-7; IM=0; DM=-7;
/M: SY='I';  M= -70,-133,-135,-126, -54, -85,-131,  44,-126,  17, -10,-131,  44,  21, -67,-124, -56,  43,-135,-119; D=-3;
/I:         I=-3; DM=-7;
/M: SY='Y';  M= -61,-129, -56,-108,   8, -71,   6, -77, -22, -53, -35,  15,  57,  54, -22,   7, -15, -66,-110,  76; D=-3;
/I:         I=-3; DM=-7;
/M: SY='L';  M= -19,  -3,-129,-123,  46,-128,-118,  27,-123,  49,  22,-125,  40,-121,-124, -62, -58,  10, -23,  15; D=-3;
/I:         I=-3; DM=-7;
/M: SY='S';  M= -21,-115, -38,-108,-124,  26,-111,-122, -74,-125,-118,  -2,-113,-103,-113,  91,  50,-114,-132,-117; D=-3;
/I:         I=-3; DM=-7;
/M: SY='P';  M= -17,-127,-105,  -5,-125, -14, -16, -67, -21, -76,-114,  36,  60,  50,  59,  16, -70,-122,-126, -21; D=-3;
/I:         I=-3; DM=-7;
/M: SY='S';  M=  27,-123,  40,  34,-126, -35,  11,-126, -30, -96,-117, -60,   0,  -8,  45,  46, -37,-119,-130, -44; D=-3;
/I:         I=-3; DM=-7;
/M: SY='L';  M=  27, -40, -75,-120,   5, -77,-118, -29,-121,  73, -12,-121,-126,-117,-122, -14,   5, -19,-121,-104; D=-3;
/I:         I=-3; DM=-7;
/M: SY='Q';  M=  11,-122,   6,  14, -14, -16, -44, -10,  26, -15,  20,  30,-117,  53, -53, -14, -33,  -5,-126,-111; D=-3;
/I:         I=-3; DM=-7;
/M: SY='K';  M=  28, -38, -52,  -4,-126, -71, -46,-122,  56, -65,-112,   9,-116,  44,  52,   9, -23, -51,-126,-115; D=-3;
/I:         I=-3; DM=-7;
/M: SY='V';  M=  40,-116,-127,-120,-103,-122, -69,   7,-120,  43, -16,-122,-125,-117, -67, -16, -51,  64,-128,-110; D=-3;
/I:         I=-3; DM=-7;
/M: SY='L';  M=-117, -53,-134,-128,  57,-135,-120,  42,-127,  73,  -1,-129,-131, -55,-125,-124,-112, -31,-113, -94; D=-3;
/I:         I=-3; DM=-7;
/M: SY='E';  M= -11,-124,  38,  54,-125, -77, -16, -54,  11, -43,-113,  47,-114,  45,  -1, -32,  10, -26,-132,-116; D=-3;
/I:         I=-3; DM=-7;
/M: SY='R';  M=  12,-123,  22, -14,-117,-117,-106, -90,  20,  18, -26,  20,-120,   8,  68, -33,  -9, -74,  -2,-112; D=-3;
/I:         I=-3; DM=-7;
/M: SY='A';  M=  91,  36,-116,-111,-124, -47,-118,-116,-112,-117, -23,-108,-116,-108,-117,  31,  -6,-104,-128,-120; D=-3;
/I:         I=-3; DM=-7;
/M: SY='Q';  M= -23,-127,  55,  56, -55, -55,  -4, -38, -24, -32, -14,  -2,-115,  67, -22, -52, -67, -16,  26,-112; D=-3;
/I:         I=-3; DM=-7;
/M: SY='K';  M=  18,-124,  30,  42, -54, -20, -30, -51,  54,-121,-115, -54,-114,  36,  15, -10, -22, -41,-127,-115; D=-3;
/I:         I=-3; DM=-7;
/M: SY='E';  M=  -9,-124,-107,  57,   7,-125,  49,  20, -43,  34, -97, -37,-120, -23, -25, -55, -68, -35,-117,  37; D=-3;
/I:         I=-3; DM=-7;
/M: SY='A';  M=  75,-117,-114,-104,-123, -26,-111,-114,  -4,-113,  46, -44,-117,  49,  29,  -4,-104, -41,-125,-115; D=-3;
/I:         I=-3; DM=-7;
/M: SY='Q';  M= -37,-125, -22,   4,-124, -39, -21, -42,  58, -35, -67, -11,-116,  67,  52,  -2, -33, -32,-125,-112;
/M: SY='Q';  M= -27,-124,  23,  34,-126, -90,-104, -75,  52, -34,-112,  -5,-114,  59,  38,  21, -13,-119,-127,-114;
/M: SY='M';  M= -17,-121,-118, -28,  25, -23,   4, -98, -64,  48,  63,  17,-124, -17,  16, -12,-109, -68,  48,  19;
/I:         I=-16; MI=0; MD=-41; IM=0; DM=-41;
/M: SY='G';  M= -55,-125,  -7,  11,-126,  78,  -3,-126,  40, -24,-115, -30,-115,  14,-105, -23, -56, -65,-125,-119;
/M: SY='D';  M= -23,  17, 112, -29,-131,-114,  54, -62,-104,-127,-124, -88,-117, -55, -31, -63,-107, -61,-147,-114;
/M: SY='S';  M= -27,-120,   5,  53,-124, -32,-105,-116, -15, -58,-114,  47,-113,  23, -22,  54,  10,  -4,-132,-117;
/M: SY='Y';  M=-118,-125,-119,  -8,  85,-127, -22, -63,  11, -72,-101,-117,-128, -17, -54, -61,-113, -42, -89, 103;
/M: SY='I';  M=-108,-120,-133,-128, -98,-136,-131,  81,-125,  14, -41,-126,-126,-124,-127,-119, -62,  73,-127,-107;
/M: SY='S';  M=  31,-115, -51,   5, -60,  20,-110,-121,-105,-122, -27, -98,-113, -43, -29,  83,  26,-112,-128,-116;
/M: SY='T';  M= -72, -52,-116,-115,-110, -18,-119,   4,-113,  -5,  -4,-107,   8, -31,-118,  39,  69,  51,-131,-112;
/M: SY='E';  M=  -9,-128,  49, 103,-132, -43,-104,-132, -48,-126,-122,-101, -46, -88, -65, -41,-107,-124,-131,-121;
/M: SY='H';  M= -88,-126,-107,-105,-110,-121, 131, -36,-105,  -9, -32, -21,-120,  26,   5,-107,  -2, -17,  15,   8;
/M: SY='L';  M=-115,-120,-134,-128,  50,-135,-121,  51,-126,  69, -40,-129,-130,-123,-125,-124,-111,   5,  12, -24;
/M: SY='L';  M= -30,-118,-132,-125,   0,-132,-120,  29,-125,  77,  21,-128,-129,-120,-124, -65,-109,  23,-120,-101;
/M: SY='L';  M= -27, -51,-128, -46, -42,-131,-117,  33, -68,  75,   5,-125, -72, -30, -17, -92, -53,   3,-120, -35;
/M: SY='A';  M=  82,-114,-114,-112,-126,  55,-117,-119,-113,-121,-114,-105,-115,-109,-118,  26,-102, -58,-125,-121;
/M: SY='L';  M=   9,-119,-128, -67,  34,-127,-117,  44,-122,  62,  24, -21,-127,-118,-122,-117,-109,  -1,-115,  -1;
/M: SY='W';  M=  30,-118,-126,-120,  30, -56,-117,  15,-117,  43,  51,-118, -54,-115, -46,   2,  -2, -15,  62, -35;
/I:         I=-29; MD=-75;
/M: SY='E';  M= -19,-144,   6,  25,-143, -84, -66, -77,  16, -90, -40, -19,-135, -34,  25,  -4, -11,-137,-148, -40; D=-29;
/I:         I=-29; MI=0; MD=-75; IM=0; DM=-75;
/M: SY='E';  M= -53,-146,  27,  56, -85, -42,-123, -88,-117, -41, -65, -32, -74,  39, -70, -30, -56, -74,-147, -40; D=-29;
/I:         I=-29; DM=-75;
/M: SY='D';  M= -39,-130,  69,  -4,-135,  22,-113,-131,  29,-132,-126,   8, -63,  -8, -29,  -2,   4, -41,-139,-124; D=-29;
/I:         I=-29; DM=-75;
/M: SY='D';  M= -84, -24,  72,  23,-132, -25, -25,-131,  25,-130,-123,  19, -18,   9,   8,  11,  -4, -95,-137, -56; D=-29;
/I:         I=-29; DM=-75;
/M: SY='G';  M= -40, -28,  15, -16, -70,  51,-112,-127, -36,-128, -32,  10,  37,-106,  27,  40,  -1, -84,-130, -60; D=-29;
/I:         I=-29; DM=-75;
/M: SY='P';  M=  -4, -15,   5,  21,  -4, -38,-113,  14, -27, -43,-107, -24,  38,  15, -40,  29,  18,  17,-127,-112;
/M: SY='A';  M=  44, -42, -32, -66, -13,  23,-120,  23, -75,  30, -48,-114,   0,-115,-121, -76,   7,  21,-124,-111;
/M: SY='A';  M=  36, -23, -63, -33, -37,  34,  -1, -67,   3, -48,  -2,  10, -62,  17,  21,  31,   4,-113,-125, -45;
/M: SY='R';  M= -39,-125,  17,  12,-121, -63, -17, -69,  44, -48, -66,   3, -56,  44,  57,  10,  -1, -28,-125, -15;
/M: SY='V';  M= -12, -10,-124,  -4, -19,-127,-121,  44,-119,  44, -60, -84,-124,-116,-122, -15, -16,  48,  38, -10;
/M: SY='L';  M= -31,-118,-129,-122,  51, -72,-115, -26, -22,  77,  24,-124,-129, -52, -61, -31,-110, -58,-113, -59;
/M: SY='K';  M=  -3,-122, -32,   3, -45, -47, -10, -55,  62,  -5, -47,  -3, -62,   5,  41, -27,  17, -12,-125,-111;
/M: SY='E';  M=   7,-123,  12,  55, -69,  -5, -42,-124,  46, -59,-115,  34,-113,  11, -12,   6, -13,-119, -14, -37;
/M: SY='Q';  M=  43, -41,-114, -69,  23, -51,  25, -22, -28,  28, -14,  24, -34,  44, -17, -53, -43, -12,-121, -75;
/M: SY='G';  M= -12,-123, -26, -58, -59,  84,  20,-129,   4, -64,-117,  18,-117, -13,-113,  -6, -34,-124,-123, -12;
/M: SY='V';  M=  30, -48,-125,-120,  26, -50,-121,  40, -31,  32,  -9, -26, -19,-118, -58,-111, -57,  47,-121,-104;
/M: SY='T';  M= -24,-118,  55,   7,-124, -53,-107,-119,  -4,-122,-116,  27, -62, -35, -11,  47,  65, -42,-135,-116;
/M: SY='P';  M=  -1,-123, -34,  37, -34,-117, -67,  -4,  38,  -9,  -5, -81,  44,-100,   9,  23, -23, -10,-123, -11;
/M: SY='K';  M=  17,-123,  21,  44,-125, -47, -33, -75,  46, -56,-113,  13,   6,  42, -27,  -5,   5, -83,-127, -42;
/M: SY='K';  M=  26,-122,  19,  28,-124, -78,-107, -41,  64, -44,-111,  19,-114,  24,   7, -15, -40, -19,-127,-115;
/M: SY='L';  M=  -7,-119,-131,-125,  14, -57,-121,  49, -74,  64, -17,-125,-127,-120,-123, -59,-108,  29,-119, -45;
/M: SY='K';  M= -19,-124, -81,  33,-118, -41,-106, -62,  63,   6, -37,   5, -49,  18,  45, -42, -26, -26,-124, -49;
/M: SY='Q';  M=  26,-120, -65,  43, -68, -48,-106,-117,  41, -27,-111,  27,-113,  47, -30,  22,  16, -53,-127,-115;
/M: SY='A';  M=  63, -54, -16,  21, -27,-111,-114,  -4, -48,  -7,-104, -12,-116,  26,-112, -19,  16,  12,-126,-113;
/M: SY='I';  M=  -8,-121,-129, -34,   6,-131, -31,  81,-123,  25, -13,-124,-124,-120,-125,-117, -57,  43,-122,-103;
/M: SY='E';  M= -21,-122,   6,  45,-114,-118, -37,   0,  12,  27,   7,  31, -37,  25, -30, -13,   8, -35,-128,-112;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='Q';  M=  15,-123,  -3,  31,-125, -36, -10,-125,  46,-123,-114,  12, -41,  52,  20,  30, -14,-119,-126, -27;
/M: SY='M';  M= -40,-119, -77, -24, -45,-128,-120,  47, -73,  42,  59, -54, -16,-116,-121, -29, -29,  52,-125,-106;
/M: SY='R';  M= -49,-128, -53, -13,-121,-122, -34, -48, -16, -27,-109, -33,-121,  -9, 107, -20, -18, -61,-126,-111;
/M: SY='G';  M= -30,-123,-110, -25, -26,  85,-115,-129,  35, -91,-119, -69, -35, -28, -48,  14, -52, -68,-122,-119;
/M: SY='G';  M= -51,-122,  20,  29, -52,  68, -44,-127, -32, -91,-119,  47, -23, -55,-112,  28, -35, -46,-129,-120;
/I:         E1=0; IE=-380; DE=-380;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 203 in 203 different sequences
Number of true positive hits 203 in 203 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] Clp R
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
203 sequences

CLPAA_SOLLC (P31541    ), CLPAB_SOLLC (P31542    ), CLPA_BRANA  (P46523    ), 
CLPA_ECO57  (P0ABI1    ), CLPA_ECOL6  (P0ABI0    ), CLPA_ECOLI  (P0ABH9    ), 
CLPA_RHOBL  (P05444    ), CLPB1_ARATH (P42730    ), CLPB1_NOSS1 (Q8YUL9    ), 
CLPB1_ORYSJ (Q6F2Y7    ), CLPB1_STRAW (Q82EU9    ), CLPB1_SYNE7 (P53533    ), 
CLPB1_SYNPX (Q7U637    ), CLPB1_SYNY3 (P74459    ), CLPB1_THEEB (Q8DJ40    ), 
CLPB2_ARATH (F4JVJ1    ), CLPB2_CHLTE (Q8KA87    ), CLPB2_NOSS1 (Q8YM56    ), 
CLPB2_ORYSJ (Q75GT3    ), CLPB2_STRAW (Q826F2    ), CLPB2_SYNE7 (O34209    ), 
CLPB2_SYNPX (Q7U3T3    ), CLPB2_SYNY3 (P74361    ), CLPB2_THEEB (Q8DG71    ), 
CLPB3_ARATH (Q9LF37    ), CLPB3_ORYSJ (Q0E3C8    ), CLPB4_ARATH (Q8VYJ7    ), 
CLPB_ACICA  (P82956    ), CLPB_AGRFC  (Q7CU92    ), CLPB_AQUAE  (O67588    ), 
CLPB_BACAN  (Q81TT4    ), CLPB_BACC1  (Q73BY1    ), CLPB_BACCR  (Q81GM5    ), 
CLPB_BACTN  (Q89YY3    ), CLPB_BDEBA  (Q6MIV0    ), CLPB_BIFLO  (Q8G4X4    ), 
CLPB_BLOFL  (Q7VQF3    ), CLPB_BORBR  (Q7WHB6    ), CLPB_BORPA  (Q7W9E6    ), 
CLPB_BORPE  (Q7VYV6    ), CLPB_BRADU  (Q89UL2    ), CLPB_BRUME  (Q8YJ91    ), 
CLPB_BRUSU  (Q7CEG6    ), CLPB_CAMJE  (Q9PI02    ), CLPB_CAUVC  (Q9A9T4    ), 
CLPB_CHLCV  (Q822Q4    ), CLPB_CHLMU  (Q9PKS5    ), CLPB_CHLPN  (Q7AJA9    ), 
CLPB_CHLTR  (O84115    ), CLPB_CHRVO  (Q7NWN7    ), CLPB_CLOAB  (Q97KG0    ), 
CLPB_CLOPE  (Q8XKG8    ), CLPB_CLOTE  (Q898C7    ), CLPB_CORDI  (Q6NF05    ), 
CLPB_COREF  (Q8FM94    ), CLPB_CORGL  (P53532    ), CLPB_COXBU  (Q83F55    ), 
CLPB_DEIRA  (Q9RVI3    ), CLPB_DESVH  (Q72AW6    ), CLPB_DICNO  (P17422    ), 
CLPB_ECO57  (P63285    ), CLPB_ECOL6  (P63286    ), CLPB_ECOLI  (P63284    ), 
CLPB_ENTFA  (Q831Y7    ), CLPB_FUSNN  (Q8RHQ8    ), CLPB_GEOSL  (Q74FF1    ), 
CLPB_GLOVI  (Q7NFE9    ), CLPB_HAEDU  (Q7VNH1    ), CLPB_HAEIN  (P44403    ), 
CLPB_HELHP  (Q7VJY3    ), CLPB_HELPJ  (Q9ZMH1    ), CLPB_HELPY  (P71404    ), 
CLPB_LACLA  (Q9CFF3    ), CLPB_LACLM  (O68185    ), CLPB_LACPL  (Q88VX7    ), 
CLPB_LEPBY  (O87444    ), CLPB_LEPIC  (Q72QU2    ), CLPB_LEPIN  (Q8F509    ), 
CLPB_LISIN  (Q929G7    ), CLPB_LISM4  (G2K265    ), CLPB_LISMF  (Q71XF9    ), 
CLPB_LISMO  (Q8Y570    ), CLPB_MEIRU  (Q7X2S8    ), CLPB_MYCBO  (P63287    ), 
CLPB_MYCLE  (Q9CB26    ), CLPB_MYCPA  (Q73T66    ), CLPB_MYCTO  (P9WPD0    ), 
CLPB_MYCTU  (P9WPD1    ), CLPB_NEIMA  (Q9JTP9    ), CLPB_NEIMB  (Q9JYQ8    ), 
CLPB_NITEU  (Q82SD8    ), CLPB_OCEIH  (Q8EU05    ), CLPB_PARUW  (Q6MD97    ), 
CLPB_PASMU  (Q9CKC0    ), CLPB_PHOLL  (Q7N788    ), CLPB_PHOPR  (Q6LMY0    ), 
CLPB_PORGI  (Q7MVE7    ), CLPB_PROFC  (Q7WSY8    ), CLPB_PROMA  (Q7VBL0    ), 
CLPB_PROMM  (Q7V8B1    ), CLPB_PROMP  (Q7V2A3    ), CLPB_PSEAE  (Q9HVN5    ), 
CLPB_PSEPK  (Q88Q71    ), CLPB_PSESM  (Q889C2    ), CLPB_RALSO  (Q8XZR0    ), 
CLPB_RHILO  (Q98G96    ), CLPB_RHIME  (Q92MK7    ), CLPB_RHOBA  (Q7UM33    ), 
CLPB_RHOPA  (Q6N1H2    ), CLPB_RICBR  (Q1RGR1    ), CLPB_RICCN  (Q92JK8    ), 
CLPB_RICFE  (Q4UN57    ), CLPB_RICPR  (Q9ZEA9    ), CLPB_RICTY  (Q68XR2    ), 
CLPB_SALTI  (Q7AMH5    ), CLPB_SALTY  (Q7CQ01    ), CLPB_SHEON  (Q8EBE6    ), 
CLPB_SHIFL  (Q7UBW5    ), CLPB_STAAC  (Q5HHB0    ), CLPB_STAAM  (Q99VB5    ), 
CLPB_STAAN  (Q7A6G6    ), CLPB_STAAR  (Q6GIB2    ), CLPB_STAAS  (Q6GAV1    ), 
CLPB_STAAW  (Q8NXE7    ), CLPB_STAEQ  (Q5HQI5    ), CLPB_STAES  (Q8CPT5    ), 
CLPB_STRAL  (Q9Z6E4    ), CLPB_STRCO  (Q8CJV9    ), CLPB_STRMU  (Q8DTC7    ), 
CLPB_THET2  (Q72IK9    ), CLPB_THET8  (Q9RA63    ), CLPB_TREDE  (Q73K92    ), 
CLPB_TREPA  (O83110    ), CLPB_VIBCH  (Q9KU18    ), CLPB_VIBPA  (Q87S63    ), 
CLPB_VIBVU  (Q8DEV2    ), CLPB_VIBVY  (Q7MNK1    ), CLPB_WOLPM  (Q73IE4    ), 
CLPB_WOLSU  (Q7M9X4    ), CLPB_XANAC  (Q8PHQ4    ), CLPB_XANCP  (Q8P6A0    ), 
CLPB_XYLFA  (Q9PGC1    ), CLPB_XYLFT  (Q87AX8    ), CLPB_YEREN  (Q9F746    ), 
CLPB_YERPE  (Q74X11    ), CLPC1_ARATH (Q9FI56    ), CLPC1_MYCS2 (A0R574    ), 
CLPC1_MYCTO (P9WPC8    ), CLPC1_MYCTU (P9WPC9    ), CLPC1_ORYSJ (Q7F9I1    ), 
CLPC2_ARATH (Q9SXJ7    ), CLPC2_ORYSJ (Q2QVG9    ), CLPC3_ORYSJ (Q53LY0    ), 
CLPC_BACSU  (P37571    ), CLPC_CHLMU  (Q9PKA8    ), CLPC_CHLPN  (Q9Z8A6    ), 
CLPC_CHLTR  (O84288    ), CLPC_CYACA  (Q9TM05    ), CLPC_GUITH  (O78410    ), 
CLPC_MYCBO  (P0A523    ), CLPC_MYCLE  (P24428    ), CLPC_PEA    (P35100    ), 
CLPC_PORPU  (P51332    ), CLPC_PYRYE  (Q1XDF4    ), CLPC_STAA3  (Q2FJB5    ), 
CLPC_STAA8  (Q2G0P5    ), CLPC_STAAB  (Q2YSD6    ), CLPC_STAAC  (P0C281    ), 
CLPC_STAAM  (Q99W78    ), CLPC_STAAN  (Q7A797    ), CLPC_STAAR  (Q6GJE4    ), 
CLPC_STAAS  (Q6GBW3    ), CLPC_STAAW  (Q8NXY8    ), CLPC_STAEQ  (Q5HRM8    ), 
CLPC_STAES  (Q8CQ88    ), CLPC_STAHJ  (Q4L3I4    ), CLPC_STAS1  (Q49V34    ), 
CLPC_TRICV  (P49574    ), CLPD1_ORYSJ (Q6H795    ), CLPD2_ORYSJ (Q7XL03    ), 
CLPD_ARATH  (P42762    ), CLPT1_ARATH (Q93WL3    ), CLPT2_ARATH (Q8GW78    ), 
CLPV1_PSEAE (Q9I742    ), CLP_TRYBB   (P31543    ), D53L_ORYSJ  (Q2QYW5    ), 
D53_ORYSJ   (Q2RBP2    ), HLYB_BRAHO  (Q54316    ), HS104_SCHPO (O94641    ), 
HS104_YEAST (P31539    ), HSP98_NEUCR (P31540    ), SMAX1_ARATH (Q9FHH2    ), 
SMAX1_ORYSJ (Q6Z517    ), SMXL2_ARATH (Q9M0C5    ), SMXL3_ARATH (Q9SVD0    ), 
SMXL4_ARATH (Q9SZR3    ), SMXL5_ARATH (Q9LU73    ), SMXL6_ARATH (Q9LML2    ), 
SMXL7_ARATH (O80875    ), SMXL8_ARATH (F4IGZ2    ), Y2667_MYCTO (P9WPC6    ), 
Y2667_MYCTU (P9WPC7    ), Y2686_MYCBO (P0A525    )
» more

PDB
[Detailed view]
48 PDB

1K6K; 1KHY; 1KSF; 1LZW; 1MBU; 1MBV; 1MBX; 1MG9; 1QVR; 1R6B; 1R6C; 1R6O; 1R6Q; 2K77; 2Y1Q; 2Y1R; 3J3R; 3J3S; 3J3T; 3J3U; 3PXG; 3PXI; 3WDB; 3WDC; 3WDD; 3WDE; 4D2Q; 4D2U; 4UQW; 4Y0B; 4Y0C; 5GUI; 5HBN; 5KNE; 5OG1; 5U2U; 5VY9; 5WBW; 6AHF; 6AMN; 6CN8; 6EM8; 6EM9; 6EMW; 6N8T; 6N8V; 6N8Z; 6OG3
» more

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View entry in raw text format (no links)
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