PROSITE entry PS52002

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General information about the entry

Entry name [info]	SM
Accession [info]	PS52002
Entry type [info]	MATRIX
Date [info]	12-OCT-2022 CREATED; 12-OCT-2022 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC52002
Associated ProRule [info]	PRU01346

Name and characterization of the entry

Description [info]

Sm domain profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=73;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=68;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.9747231; R2=0.0114273; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1184; N_SCORE=15.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=397; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-47; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;

...

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='D';  M= -22,-159,  57, -19, -58, -56,-144, -31, -20,  10,  30, -25,  -3, -91,  33, -11, -31, -21,   6,-100;
/M: SY='P';  M= -19, -66, -43,-142, -12, -35, -13, -46, -20,   0,  50,   5,  73,   2, -62,   6,  -6, -25,-156, -10;
/M: SY='F';  M= -41, -16, -51, -26,  59, -21,-147, -10, -21,  27,   5, -39, -18,-146, -46,  21, -15,   9,-147, -17;
/M: SY='L';  M= -47, -25,   4, -10, -50, -46,  28, -15,  -2,  36, -15, -12,  34, -56,  -3,  18, -45, -39,-153,  19;
/M: SY='N';  M= -21,-149, -26, -11,  51, -19,-138, -47, -18,   5,  23,  64,-152, -20, -96,  17,  -4, -10,-150, -27;
/M: SY='L';  M=  -4,-149,   4, -26, -16, -46, -16,  -1, -56,  59,  44, -31, -20,  13, -50, -38,   3, -35, -37, -26;
/M: SY='M';  M=   7,   6, -26,   3, -63, -75,  24, -61,  24,  25,  26,   8,-147,   6, -19,  13,  20, -10,-152,  10;
/M: SY='R';  M=  -2, -23,  35,  14,   5, -44,-134,-148,  23, -37, -25,  22, -48,  30,  57,  12, -24, -60,-155,-139;
/M: SY='W';  M= -12,  18, -90,-101,  22,-115, -19, -17,  39,  21,  17, -49,-151, -12, -19,  19,  -9, -26,  74,  43;
/M: SY='I';  M= -70,-150, -47,  25,-135,-117,-143,  55, -24,  16,  -3,  27,-149,  18, -29, -28, -25,  46,-155, -39;
/M: SY='G';  M=-133,-154,  40, -71,-158,  81,  13,-163,  15,-160, -95,  43,-146, -22,  19, -72,-139,-159,-157, -74;
/M: SY='H';  M= -67,  -4, -41,  -9, -10,-145,  55,  17,  36, -69, -71, -26,-146,  17,  14,  51,  15, -17,-152,  12;
/M: SY='P';  M= -49,-155, -20, -11, -43, -16,  -8,  -3,  24, -75, -56,   7,  66,  34,  35, -24,  16, -15,-154, -22;
/M: SY='V';  M=-109,  -7,-160,-155,-100,-162, -68,  45,-152,  -8,  30,-154,-155,-152,-154,-145, -59,  94,-159, -32;
/M: SY='T';  M= -42, -20, -52,  -1, -59,-112, -26,  -3,   2,  -9, -28, -45,-144,  29,  20,  55,  55, -24,  -8, -31;
/M: SY='V';  M= -83,  47,-160, -71, -25,-163,-160,  71,-153, -15, -62,-154,-156,-154,-156,-146,-132,  83,-158,-136;
/M: SY='Y';  M= -48,-152, -52,  33,  24,-150,   2,   8,  31, -15, -71,  15,-147, -21,  21, -40,  30, -25,  22,  46;
/M: SY='L';  M= -98,  35,-155,-150, -17,-107,-146, -45, -82,  79,  21, -52,-156,-146, -66, -17,  30,   0,-152,-133;
/M: SY='K';  M= -54,  34, -37, -91, -40, -31,  38, -40,  63, -48, -75,  23,-148,  -5,  26, -53,  15,  35,-156, -23;
/M: SY='N';  M= -50,-149,  57,  13, -23,   2,-131, -33, -90, -54,-146,  90, -65, -28, -81,  27, -21,-148,   8, -70;
/I:         I=-31; MI=0; MD=-79; IM=0; DM=-79;
/M: SY='G';  M= -84,-154,  42,   4,-157,  88,-140,-160, -47, -35,-149,  21,-145, -29, -16, -42, -86,-156,-156,-151;
/M: SY='R';  M= -96, -60, -29,  11,  17,   0,  -2,  18,  19, -39,  19, -27,-148, -13,  52, -19,   2,  24,-151, -43;
/M: SY='Q';  M= -80,  -5, -46,  39,-146,-151, -28, -17,  40, -28, -19, -42, -32,  43,  36, -21,  18,  33,-156, -56;
/M: SY='Y';  M= -47,  -2,-157,-154,  33,-159,-138,  34,-150,  43, -43,-153,-158,-148,-149,-146, -33,  33,-131,  89;
/M: SY='Q';  M= -62, -78, -63,  37,-100,-148,  -3,   8,  31, -58, -52,  -7,-144,  68,  40,   7,  19,  -7, -48, -53;
/M: SY='G';  M=  -6,-153,-142,-152,-160, 108,-148,-166,-147,-162,-152,-128,-146,-144,-154,-126,-144,-159,-151,-155;
/M: SY='T';  M=-128,  -5, -96,  22,   6,-154,  18,  41,  15,  -2, -75, -87,-147,  12,  18, -32,  41,  16,  19, -19;
/M: SY='L';  M=-142,-148,-163,-157,  45,-164,-152,  53,-155,  65, -27,-157,-158,-153,-154,-151,-137,  46,-146,-126;
/M: SY='K';  M= -37,-152, -42,  17,-140, -14,  26, -10,  48, -12, -52, -66,-146,   7,  25, -24,  16,  27,   0,  15;
/M: SY='S';  M=  48,  18, -32, -20,-153,  46, -58,-151, -36,-152,-145,  17,-144, -11,-141,  49,  27,-114,  16,-147;
/M: SY='F';  M= -14,  42,-158,-155,  97,-156,-146,  18,-151, -42,-126,-149,-157,-155,-152,-101,  19,  29,-131,  38;
/M: SY='D';  M=-141,-155, 117, -25,-162,-140,-131,-160,-132,-160,-157,  19,-144,-130,-140,  19, -13,-156,-176,-148;
/M: SY='Q';  M= -24,-152,   5, -14,-148,  -7, -15, -39,   3, -25, -66,  44,  26,  61,  -4,  31, -12, -20,-155,  -7;
/M: SY='F';  M= -84,-152,   9,  12,  72, -75,  58,-101,  -6, -45,-134,  13, -26, -10,-138,   8, -36, -20,  11,  61;
/I:         I=-28; MI=0; MD=-70; IM=0; DM=-70;
/M: SY='M';  M=   0,  45,-151,-148,   2, -29,-144, -22,-145, -11,  95,  -6,-151, -23,-148,  19,  36,  -8,  47,-135; D=-28;
/I:         I=-28; DM=-70;
/M: SY='N';  M= -92, -85,  11, -67,-148, -25,-131, -20,   8, -57,-139, 107,-149,-132,-136, -77,  13,  32,-167,-146;
/M: SY='M';  M= -46,   4,-160,-154,  -8, -77,-150,  62,-150,  45,  68,-152,-114,-148, -40, -91, -26,  41,-152,-132;
/M: SY='V';  M=  25,-148,-151, -90, -55, -33,  -3,  29, -44,  36,   3, -76,-152,  37, -76, -34, -41,  50,-152, -13;
/I:         I=-9; MD=-23;
/M: SY='L';  M= -65,-149, -27,  -1,  10,-161,-145,   4,-148,  78,  28, -80,-157,-144, -19,-149, -30, -11,-150,-131; D=-9;
/I:         I=-9; MD=-23;
/M: SY='R';  M= -18,  11,  32,  29, -49,  -8, -65, -38,  26, -27, -34, -37,-146,   9,  33,  31,  -2, -15,-158,-143; D=-9;
/I:         I=-9; MD=-23;
/M: SY='D';  M= -34,  11,  73,  23,-157, -62, -28,-154,  13, -60,   3,  73,-146,  45, -51, -43,-104,-153,-165, -93; D=-9;
/I:         I=-9; MD=-23;
/M: SY='C';  M=  33,  59,-150,-149, -28,  31,-154, -22,-148, -38,-135,-142,   0,-148,-153, -24,  41,  48,-160,-146; D=-9;
/I:         I=-9; MD=-23;
/M: SY='H';  M= -53, -40, -22,  29,  -2,-158,  31, -11,   0, -41, -54,-142, -15,  28,  24, -19,  10,  25,-162, -99; D=-9;
/I:         I=-9; MD=-23;
/M: SY='E';  M= -85,   5, -57,  78,-106,-158,  -8,-107, -59, -52, -17, -18,-151, -86, -48,  25,  -3, -34, -38, -26; D=-9;
/I:         I=-9; MD=-23;
/M: SY='T';  M=-157, -32, -60, -58,  19,-170, -21,   6, -12, -36, -13,-101,  -5, -95,  -5, -25,  32, -17,   4,  24; D=-9;
/I:         I=-9; MD=-23;
/M: SY='W';  M= -21, -93,  -9, -41, -78, -29, -55,  20, -54, -40, -19,   7, -98, -38, -15,   3, -57,  -4,  41,  11; D=-9;
/I:         I=-9; MD=-23;
/M: SY='T';  M= -78,-173,  -5, -25, -71, -37, -32, -49,  13,-169, -55, -18, -46, -69,   0,  -5,  40, -66,-179, -22; D=-9;
/I:         I=-9; MI=0; MD=-23; IM=0; DM=-23;
/M: SY='G';  M= -88, -79, -10, -45,-172,  27, -59, -51, -21,-138, -87,   3,  27, -54, -14, -41, -12, -40, -24, -15; D=-9;
/I:         I=-9; DM=-23;
/M: SY='P';  M= -89,-173,  -9,   8,-169,  16,-157, -49,  11, -94, -57,  -1,  29, -47, -14, -35, -26, -16,-174, -25; D=-9;
/I:         I=-9; DM=-23;
/M: SY='E';  M= -75,   0, -69,  33, -67, -55, -10, -61,  18, -29,-154,   4,-121, -31,  23,  -4, -34, -12,-174, -95; D=-9;
/I:         I=-9; DM=-23;
/M: SY='K';  M= -76,-167,  28,   3, -44, -37, -29, -45,  35,-102, -20, -95,   8,  11,  -8, -12,   3,  -7,-171,-156; D=-9;
/I:         I=-9; DM=-23;
/M: SY='R';  M= -58,   6, -63,   3, -51,  22, -47, -40,  10, -64,-150,  21, -22, -51,  42, -10,   4, -21, -10, -93; D=-9;
/I:         I=-9; DM=-23;
/M: SY='H';  M= -65, -25, -46, -51,  -6,-156,  34, -13,  22, -35, -47,  25,   9,  14, -16,  -8, -14,  29,-163, -28; D=-9;
/I:         I=-9; DM=-23;
/M: SY='L';  M= -61,  -4, -44, -98, -37, -94, -33,  15,-107,  41,  18,  -1, -11,   5, -29,  -5, -55,  -7, -78,  39; D=-9;
/I:         I=-9; DM=-23;
/M: SY='G';  M= -21,-158,  39,   2,-164,  52,-141,-163,  28,-116,-153,  20,  14,  22, -41,  11,-139,-159,-162,-154; D=-9;
/I:         I=-9; DM=-23;
/M: SY='Q';  M= -31,-154,  24,  27, -15,-126,  -4, -22,   6,   9,  15, -19,-111,  54, -12, -33,   1,   4,-154,   0; D=-9;
/I:         I=-9; DM=-23;
/M: SY='Q';  M=   9,  19,-150,-142,  -2, -92, -33,  32, -20,   5,  45, -55,-151,  52,-141, -52,   2,  45,-149,  13;
/M: SY='M';  M= -62,-148, -67,-115,  54, -33,-144,  14, -13,  47,  57, -90,-155,-146,-146, -16, -26,  33,-143,   7;
/M: SY='I';  M=-140, -32,-162, -87,  32,-164,-156,  82,-155,  30, -26,-155,-156,-153,-156,-150,-136,  53,-148, -42;
/M: SY='R';  M=-143,-157,-139, -57, -40, -75, -25,-148,  17,-145,  23,  24,  10, -70,  95, -64, -75, -67,-141,  65;
/M: SY='G';  M=   2,  55, -78, -64, -57,  78,-144,-152,  45, -17,-143,-132, -57,-138, -91, -47, -14,-148,-151, -11;
/M: SY='H';  M=-104,-151,  48,   3,-153, -45,  93,-154, -24,-152, -45,  50,  -8, -18, -44,  53,   9, -79,-167,-137;
/M: SY='N';  M=  41,-147,  55, -42, -17, -51,  12,-106, -27, -49,-142,  66,-146,  -5, -15,  19,  -3, -68,-159, -24;
/M: SY='I';  M=-138,   0,-162,-158, -28,-164,-161,  89,-155,  -2, -64,-155,-155,-153,-157, -85,-133,  69,-155,-135;
/M: SY='S';  M= -20, -44, -65,-136,-141,-110,-141,   5,  38,  -3,  21, -52,-147,  -2,  28,  49,   9,  38,-156, -61;
/M: SY='Y';  M= -75,-148,  41, -18,   6, -73, -30, -60, -95,   9,  25, -47,-147, -16,-142,  28,  59, -27,   2,  63;
/M: SY='I';  M=-139,-149,-160, -85,  -1,-163,-153,  77,-153,  32,  10,-154,-155,-151,-154, -68, -35,  57,-149,   5;
/M: SY='E';  M= -27, -44, -30,  39, -75,  -7,   7,   4,   0, -54,  31, -99,-144,  26,   6,  35,  28,  15,-157, -91;
/M: SY='P';  M=   7,-152,-147,   3,  -1, -76,-147,  24, -57,  10, -76, -98,  77,-142, -63, -52, -26,  43,-151,   0;
/M: SY='P';  M=  -1, -24, -14,  -6, -35, -23, -82,  25,   5,  20, -32,  -8,  37,  19, -26,   1, -18,   6,-155,-141;
/M: SY='D';  M= -32,-156,  66,  37,-158,  -7, -75,-155,  29, -37,-148,  16,  22, -29,  19, -17,   1,-152,-163,-148;
/M: SY='P';  M= -19,-158,  12,  32, -44, -33,-144, -10, -22, -34,   8,   5,  59, -27,  -4,  10, -51,   2,-160, -60;
/M: SY='P';  M=   1, -15,   3,  11,-118, -17,-150,  16, -27,  -3,   5, -11,  34, -46, -38, -34, -42,  33,-163, -91;
/I:         E1=0; IE=-380; DE=-380;

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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	645 in 645 different sequences
Number of true positive hits	645 in 645 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Matrix type [info]	protein_domain
Scaling database [info]	reversed
Author [info]	CJA_Sigrist
Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Feature key [info]	DOMAIN
Feature description [info]	Sm
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

645 sequences

ATX2L_HUMAN (Q8WWM7), ATX2L_MOUSE (Q7TQH0), ATX2_CAEEL  (G5ED29),

ATX2_DICDI  (Q55DE7), ATX2_DROME  (Q8SWR8), ATX2_DROPS  (Q29A33), 
ATX2_HUMAN  (Q99700), ATX2_MOUSE  (O70305), CID3_ARATH  (Q8L793), 
CID4_ARATH  (Q94AM9), DCP5L_ARATH (Q9FH77), DCP5_ARATH  (Q9C658), 
EDC3_CHICK  (Q5ZLS2), EDC3_DANRE  (Q502M5), EDC3_DROME  (Q9VVI2), 
EDC3_HUMAN  (Q96F86), EDC3_MACFA  (Q4R8V9), EDC3_MOUSE  (Q8K2D3), 
EDC3_PONAB  (Q5RDU9), EDC3_SCHPO  (O94752), EDC3_XENLA  (Q5XH48), 
EDC3_YEAST  (P39998), GEMI6_BOVIN (Q2KHW8), GEMI6_HUMAN (Q8WXD5), 
GEMI6_MOUSE (Q9CX53), GEMI6_SCHPO (G2TRK8), GEMI7_BOVIN (Q17QA0), 
GEMI7_HUMAN (Q9H840), GEMI7_MOUSE (Q9CWY4), GEMI7_SCHPO (G2TRR1), 
HEZ_DROME   (Q9VT67), HFQ_ACIC5   (C1F408), HFQ_ACIET   (B9MFY1), 
HFQ_ACISJ   (A1W582), HFQ_ACTP2   (A3N3P9), HFQ_ACTP7   (B3H331), 
HFQ_ACTPJ   (B0BTY6), HFQ_ACTSZ   (A6VN08), HFQ_AERHH   (A0KGS1), 
HFQ_AERS4   (A4SR25), HFQ_AFIC5   (B6JDZ0), HFQ_AGRFC   (Q8UFE8), 
HFQ_AGRRK   (B9JF08), HFQ_ALBFT   (Q21W33), HFQ_ALCBS   (Q0VME7), 
HFQ_ALIF1   (Q5E2C8), HFQ_ALIFM   (B5FBR4), HFQ_ALISL   (B6EMQ7), 
HFQ_ALKCK   (Q5WFY7), HFQ_ALKEH   (Q0AB60), HFQ_ALKMQ   (A6TR76), 
HFQ_ALKOO   (A8MFD1), HFQ_ANOFW   (B7GIA1), HFQ_AQUAE   (O66512), 
HFQ_AROAE   (Q5P7B8), HFQ_AZOC5   (Q43971), HFQ_AZOSB   (A1K3Z4), 
HFQ_AZOVD   (C1DLQ2), HFQ_BACAA   (C3P4Y3), HFQ_BACAC   (C3L887), 
HFQ_BACAH   (A0RH87), HFQ_BACAN   (Q81WX1), HFQ_BACC0   (B7JIE0), 
HFQ_BACC1   (Q733C0), HFQ_BACC2   (B7ISQ8), HFQ_BACC3   (C1ENE6), 
HFQ_BACC4   (B7HCI2), HFQ_BACC7   (B7HKR8), HFQ_BACCN   (A7GR70), 
HFQ_BACCQ   (B9IUM6), HFQ_BACCR   (Q81A74), HFQ_BACCZ   (Q636W3), 
HFQ_BACHK   (Q6HF98), HFQ_BACLD   (Q65JA8), HFQ_BACMK   (A9VR02), 
HFQ_BACP2   (A8FDJ0), HFQ_BACSU   (O31796), HFQ_BACVZ   (A7Z501), 
HFQ_BARBK   (A1USH6), HFQ_BARHE   (Q6G3L8), HFQ_BARQU   (Q6G014), 
HFQ_BART1   (A9IVD2), HFQ_BAUCH   (Q1LSQ5), HFQ_BEII9   (B2IB74), 
HFQ_BLOPB   (Q493V9), HFQ_BORA1   (Q2KYA0), HFQ_BORBR   (Q7WHN6), 
HFQ_BORPA   (Q7W6Q2), HFQ_BORPD   (A9IK70), HFQ_BORPE   (Q7VWL6), 
HFQ_BRADU   (Q89LQ2), HFQ_BRASB   (A5EIZ5), HFQ_BRASO   (A4YUP3), 
HFQ_BREBN   (C0ZEY6), HFQ_BRUA1   (B2S5W3), HFQ_BRUA2   (Q2YPW9), 
HFQ_BRUA4   (A6X120), HFQ_BRUAB   (P0C107), HFQ_BRUC2   (A9M5C4), 
HFQ_BRUMB   (C0RJ83), HFQ_BRUME   (P0A3G7), HFQ_BRUO2   (A5VQN6), 
HFQ_BRUSI   (B0CGR3), HFQ_BRUSU   (P0A3G8), HFQ_BURA4   (B1YR39), 
HFQ_BURCH   (A0K7T1), HFQ_BURCJ   (B4EAW4), HFQ_BURCM   (Q0BEX2), 
HFQ_BURL3   (Q39FR4), HFQ_BURM1   (A9AH01), HFQ_BURM7   (A3MK69), 
HFQ_BURM9   (A2S2A7), HFQ_BURMA   (Q62JW9), HFQ_BURMS   (A1V4J5), 
HFQ_BURO0   (B1JT87), HFQ_BURO1   (Q1BGW9), HFQ_BURP0   (A3NVW5), 
HFQ_BURP6   (A3NA48), HFQ_BURPS   (Q63US8), HFQ_BURTA   (Q2SWD9), 
HFQ_BURVG   (A4JEN5), HFQ_CALBD   (B9MJT7), HFQ_CALS4   (Q8RA69), 
HFQ_CALS8   (A4XL44), HFQ_CARHZ   (Q3ACA9), HFQ_CAUSK   (B0SXF2), 
HFQ_CAUVC   (Q9A7H8), HFQ_CAUVN   (B8GW92), HFQ_CELJU   (B3PDC1), 
HFQ_CERS1   (A3PJP5), HFQ_CERS4   (Q3J2L7), HFQ_CERS5   (A4WSM3), 
HFQ_CHESB   (Q11HW7), HFQ_CHRSD   (Q1QY26), HFQ_CHRVO   (Q7NS93), 
HFQ_CITK8   (A8AMM9), HFQ_CLOAB   (P58243), HFQ_CLOB1   (A7FUK7), 
HFQ_CLOB6   (C3KX32), HFQ_CLOB8   (A6LWI9), HFQ_CLOBA   (B2V268), 
HFQ_CLOBB   (B2TIB6), HFQ_CLOBH   (A5I2R9), HFQ_CLOBJ   (C1FNT6), 
HFQ_CLOBK   (B1IM65), HFQ_CLOBL   (A7GE42), HFQ_CLOBM   (B1KSA0), 
HFQ_CLOD6   (Q187T2), HFQ_CLOK1   (B9E1Z3), HFQ_CLOK5   (A5N8I8), 
HFQ_CLONN   (A0Q0M9), HFQ_CLOP1   (Q0TRD3), HFQ_CLOPE   (Q8XL84), 
HFQ_CLOPS   (Q0STR1), HFQ_COLP3   (Q48A22), HFQ_CROS8   (A7MM89), 
HFQ_CUPMC   (Q1LLJ6), HFQ_CUPNH   (Q0K967), HFQ_CUPPJ   (Q46ZI8), 
HFQ_CUPTR   (B3R1J7), HFQ_DECAR   (Q47BS1), HFQ_DELAS   (A9BMU8), 
HFQ_DESAP   (B1I296), HFQ_DESHD   (B8FWE3), HFQ_DESHY   (Q24X67), 
HFQ_DESRM   (A4J5Q0), HFQ_DICNV   (A5EVF4), HFQ_ECO24   (A7ZV41), 
HFQ_ECO27   (B7UQI1), HFQ_ECO45   (B7MKX6), HFQ_ECO55   (B7LC31), 
HFQ_ECO57   (P0A6X5), HFQ_ECO5E   (B5Z2H8), HFQ_ECO7I   (B7NTM8), 
HFQ_ECO81   (B7MSJ0), HFQ_ECO8A   (B7M8T2), HFQ_ECOBW   (C4ZR49), 
HFQ_ECODH   (B1XDS3), HFQ_ECOHS   (A8A7R6), HFQ_ECOK1   (A1AJ78), 
HFQ_ECOL5   (Q0T9M1), HFQ_ECOL6   (P0A6X4), HFQ_ECOLC   (B1IT34), 
HFQ_ECOLI   (P0A6X3), HFQ_ECOLU   (B7NGA6), HFQ_ECOSE   (B6I276), 
HFQ_ECOSM   (B1LQJ2), HFQ_ECOUT   (Q1R388), HFQ_ENT38   (A4W5R3), 
HFQ_ERWT9   (B2VCX3), HFQ_ESCF3   (B7LLV4), HFQ_EXIS2   (B1YMH1), 
HFQ_EXISA   (C4L1C0), HFQ_FERNB   (A7HJA5), HFQ_FRAP2   (B0TZB1), 
HFQ_FRAT1   (Q14IJ3), HFQ_FRATF   (A7NBS2), HFQ_FRATH   (Q2A3T5), 
HFQ_FRATM   (B2SG24), HFQ_FRATN   (A0Q6S3), HFQ_FRATO   (Q0BM86), 
HFQ_FRATT   (Q5NH41), HFQ_FRATW   (A4IYB0), HFQ_GEOKA   (Q5L0D8), 
HFQ_GEOSW   (C5D9J0), HFQ_GLAP5   (B8F663), HFQ_GLUDA   (A9HLS1), 
HFQ_GRABC   (Q0BT31), HFQ_HAEDU   (Q7VN44), HFQ_HAEI8   (Q4QND2), 
HFQ_HAEIE   (A5UA77), HFQ_HAEIG   (A5UGS5), HFQ_HAEIN   (P44437), 
HFQ_HAHCH   (Q2SBC2), HFQ_HALH5   (Q9KAC4), HFQ_HALHL   (A1WUT6), 
HFQ_HAMD5   (C4K3V5), HFQ_HERAR   (A4G4K7), HFQ_HISS1   (Q0I441), 
HFQ_HISS2   (B0UTF5), HFQ_HYDCU   (Q31GP2), HFQ_HYPNA   (Q0C0N8), 
HFQ_IDILO   (Q5QW99), HFQ_JANMA   (A6SZW5), HFQ_JANSC   (Q28Q51), 
HFQ_KLEP3   (B5Y332), HFQ_KLEP7   (A6TH87), HFQ_LARHH   (C1DD48), 
HFQ_LEGPA   (Q5X982), HFQ_LEGPC   (A5I9G0), HFQ_LEGPH   (Q5ZZK1), 
HFQ_LEGPL   (Q5X0L0), HFQ_LEPBA   (B0SBH9), HFQ_LEPBJ   (Q04S67), 
HFQ_LEPBL   (Q04ZZ4), HFQ_LEPBP   (B0SJ28), HFQ_LEPCP   (B1XXK8), 
HFQ_LEPIC   (Q72Q67), HFQ_LEPIN   (Q8F5Z7), HFQ_MAGSA   (Q2W4P9), 
HFQ_MANSM   (Q65SD5), HFQ_MARMM   (Q0APP7), HFQ_MARMS   (A6VYL6), 
HFQ_MARN8   (A1U4C5), HFQ_METC4   (B7KRF3), HFQ_METCA   (Q606N3), 
HFQ_METEP   (A9W6K8), HFQ_METFK   (Q1H0Y0), HFQ_METNO   (B8IDE7), 
HFQ_METPB   (B1ZEN4), HFQ_METRJ   (B1M597), HFQ_METS4   (B0UIY3), 
HFQ_METSB   (B8ELB8), HFQ_MOOTA   (Q2RJF9), HFQ_NATTJ   (B2A3Y0), 
HFQ_NEIG1   (Q5F9R5), HFQ_NEIMA   (P64344), HFQ_NEIMB   (P64345), 
HFQ_NEIMF   (A1KT11), HFQ_NITEC   (Q0AHG1), HFQ_NITEU   (Q82V23), 
HFQ_NITHX   (Q1QM92), HFQ_NITMU   (Q2YBW6), HFQ_NITOC   (Q3J803), 
HFQ_NITWN   (Q3SSN1), HFQ_OCEIH   (Q8EQQ9), HFQ_PARC0   (A1TM32), 
HFQ_PARDP   (A1B9J4), HFQ_PARL1   (A7HXU8), HFQ_PARP8   (B2JIU6), 
HFQ_PARPJ   (B2SXS5), HFQ_PARXL   (Q13X33), HFQ_PASMU   (Q9CMC6), 
HFQ_PECAS   (Q6D067), HFQ_PECCC   (Q9ZI76), HFQ_PECCP   (C6DFJ7), 
HFQ_PELTS   (A5D2K8), HFQ_PHOLL   (Q7MYU0), HFQ_PHOPR   (Q9EYZ5), 
HFQ_POLSJ   (Q12AC3), HFQ_PROMH   (B4F266), HFQ_PSE14   (Q48P02), 
HFQ_PSEA6   (Q15NR0), HFQ_PSEA7   (A6VD57), HFQ_PSEA8   (B7V207), 
HFQ_PSEAB   (Q02F74), HFQ_PSEAE   (Q9HUM0), HFQ_PSEAI   (B3EWP0), 
HFQ_PSEE4   (Q1I449), HFQ_PSEF5   (Q4KJ73), HFQ_PSEFS   (C3KDW3), 
HFQ_PSELT   (A8F5B4), HFQ_PSEMY   (A4XPY7), HFQ_PSEP1   (A5W9T0), 
HFQ_PSEPF   (Q3KIY9), HFQ_PSEPG   (B0KKZ5), HFQ_PSEPK   (Q88DD3), 
HFQ_PSEPW   (B1JAD4), HFQ_PSESM   (Q87VJ4), HFQ_PSET1   (Q3IDT7), 
HFQ_PSEU2   (Q4ZYY0), HFQ_PSYIN   (A1SZL0), HFQ_RALN1   (Q8Y025), 
HFQ_RALPJ   (B2U9V4), HFQ_RHIE6   (B3PYU7), HFQ_RHIEC   (Q2K8U6), 
HFQ_RHIL3   (Q1MGZ1), HFQ_RHILO   (Q98MX2), HFQ_RHILW   (B5ZND2), 
HFQ_RHIME   (Q92Q84), HFQ_RHOP2   (Q2IW30), HFQ_RHOP5   (Q07MY5), 
HFQ_RHOPA   (Q6N6L8), HFQ_RHOPB   (Q214Q4), HFQ_RHOPS   (Q137B6), 
HFQ_RHOPT   (B3QIM2), HFQ_RHORT   (Q2RTR1), HFQ_ROSDO   (Q165Q6), 
HFQ_RUEPO   (Q5LRP4), HFQ_RUEST   (Q1GGX7), HFQ_RUMCH   (B8I2Q2), 
HFQ_SACD2   (Q21HA2), HFQ_SALA4   (B5F387), HFQ_SALAR   (A9MFP0), 
HFQ_SALCH   (Q57GL9), HFQ_SALDC   (B5FRM8), HFQ_SALEP   (B5R0N9), 
HFQ_SALG2   (B5R9B9), HFQ_SALHS   (B4TFA6), HFQ_SALNS   (B4T2R7), 
HFQ_SALPA   (Q5PL47), HFQ_SALPB   (A9N4Y6), HFQ_SALPC   (C0Q6C9), 
HFQ_SALPK   (B5BKI1), HFQ_SALSV   (B4TSF2), HFQ_SALTI   (P0A1R1), 
HFQ_SALTY   (P0A1R0), HFQ_SERP5   (A8G8U9), HFQ_SHEAM   (A1SA21), 
HFQ_SHEB2   (B8ECA3), HFQ_SHEB5   (A3D024), HFQ_SHEB8   (A6WSV2), 
HFQ_SHEB9   (A9L3V9), HFQ_SHEDO   (Q12J95), HFQ_SHEFN   (Q07XW7), 
HFQ_SHEHH   (B0TU64), HFQ_SHELP   (A3QAE0), HFQ_SHEON   (Q8EJ69), 
HFQ_SHEPA   (A8H8G6), HFQ_SHEPC   (A4YAK9), HFQ_SHEPW   (B8CIX6), 
HFQ_SHESA   (A0KSR7), HFQ_SHESH   (A8FRD5), HFQ_SHESM   (Q0HMN9), 
HFQ_SHESR   (Q0HR42), HFQ_SHESW   (A1RFR7), HFQ_SHEWM   (B1KHU8), 
HFQ_SHIB3   (B2TY47), HFQ_SHIBS   (Q31TA2), HFQ_SHIDS   (Q328F1), 
HFQ_SHIF8   (Q0SXB0), HFQ_SHIFL   (P0A6X6), HFQ_SHISS   (Q3YUH1), 
HFQ_SINFN   (C3MBM0), HFQ_SINMW   (A6U8G6), HFQ_SODGM   (Q2NW63), 
HFQ_STRM5   (B4SRA5), HFQ_STRMK   (B2FL26), HFQ_STUS1   (A4VQP0), 
HFQ_SYMTH   (Q67NL2), HFQ_SYNWW   (Q0AYA9), HFQ_TERTT   (C5BRH7), 
HFQ_THEAB   (B7IEU8), HFQ_THEM4   (A6LNU8), HFQ_THEMA   (Q9WYZ6), 
HFQ_THEP1   (A5IJP8), HFQ_THEP3   (B0K9L8), HFQ_THEPX   (B0K1A5), 
HFQ_THESQ   (B1L8W9), HFQ_THIDA   (Q3SIN9), HFQ_THISH   (B8GNC7), 
HFQ_TOLAT   (C4L9M9), HFQ_VARPS   (C5CXH1), HFQ_VEREI   (A1WE11), 
HFQ_VIBA3   (B7VI55), HFQ_VIBC1   (A7MX76), HFQ_VIBC3   (A5F3L7), 
HFQ_VIBCH   (Q9KV11), HFQ_VIBCM   (C3LR79), HFQ_VIBPA   (Q87L07), 
HFQ_VIBVU   (Q8DCU9), HFQ_VIBVY   (Q7MH02), HFQ_WIGBR   (Q8D317), 
HFQ_XANAC   (Q8PLQ4), HFQ_XANC5   (Q3BUR4), HFQ_XANC8   (Q4UTQ8), 
HFQ_XANCB   (B0RTY9), HFQ_XANCP   (Q8P9X7), HFQ_XANOM   (Q2P1M4), 
HFQ_XANOR   (Q5GYM1), HFQ_XYLF2   (B2I691), HFQ_XYLFA   (Q9PH57), 
HFQ_XYLFM   (B0U1E7), HFQ_XYLFT   (Q87F71), HFQ_YERE8   (A1JIR5), 
HFQ_YEREN   (Q56928), HFQ_YERP3   (A7FMX9), HFQ_YERPA   (Q1C100), 
HFQ_YERPB   (B2K204), HFQ_YERPE   (Q8ZIW2), HFQ_YERPG   (A9QYN1), 
HFQ_YERPN   (Q1CEF5), HFQ_YERPP   (A4TRN9), HFQ_YERPS   (Q66FB5), 
HFQ_YERPY   (B1JMN9), L14AA_XENLA (A0A8M2), L14AB_XENLA (Q8AVJ2), 
L14BA_XENLA (Q68FI1), L14BB_XENLA (Q498K9), LMD1A_XENLA (Q6GQ67), 
LMD1B_XENLA (Q6NU60), LS12A_DANRE (Q6PBA2), LS12B_DANRE (Q6NSN1), 
LS14A_BOVIN (Q3MHF8), LS14A_HUMAN (Q8ND56), LS14A_MOUSE (Q8K2F8), 
LS14A_PONAB (Q5R4R4), LS14A_XENTR (Q6NVR8), LS14B_HUMAN (Q9BX40), 
LS14B_MOUSE (Q8CGC4), LS14B_XENTR (Q566L7), LS14H_CAEEL (Q9XW17), 
LSM10_HUMAN (Q969L4), LSM10_MOUSE (Q8QZX5), LSM11_HUMAN (P83369), 
LSM11_MOUSE (Q8BUV6), LSM11_XENLA (Q7T076), LSM12_BOVIN (Q0VCF9), 
LSM12_CHICK (Q5ZML5), LSM12_DROME (Q9VYR0), LSM12_HUMAN (Q3MHD2), 
LSM12_MOUSE (Q9D0R8), LSM12_PONAB (Q5RAT5), LSM12_TRYB2 (Q38E83), 
LSM12_XENLA (Q6GP89), LSM12_XENTR (Q6P833), LSM12_YEAST (P38828), 
LSM14_PLEWA (Q9YH12), LSM1A_ARATH (Q945P8), LSM1B_ARATH (Q8LFL8), 
LSM1_BOVIN  (Q5E9Z8), LSM1_DICDI  (Q54W83), LSM1_HUMAN  (O15116), 
LSM1_MOUSE  (Q8VC85), LSM1_SCHPO  (P87173), LSM1_YEAST  (P47017), 
LSM2_ARATH  (Q1H595), LSM2_DICDI  (Q54TF6), LSM2_ENCCU  (Q8SQK1), 
LSM2_ENTBH  (A9CTE0), LSM2_HUMAN  (Q9Y333), LSM2_MOUSE  (O35900), 
LSM2_SCHPO  (O94408), LSM2_YEAST  (P38203), LSM3A_ARATH (Q9LMN4), 
LSM3B_ARATH (Q9C6K5), LSM3_BOVIN  (Q32PE9), LSM3_DICDI  (Q1ZXK3), 
LSM3_HUMAN  (P62310), LSM3_MOUSE  (P62311), LSM3_SCHPO  (Q9Y7M4), 
LSM3_YEAST  (P57743), LSM4_ARATH  (F4K4E3), LSM4_BOVIN  (Q3ZBK6), 
LSM4_CAEEL  (Q19952), LSM4_DICDI  (Q54KX4), LSM4_FAGSY  (Q9ZRU9), 
LSM4_HUMAN  (Q9Y4Z0), LSM4_MOUSE  (Q9QXA5), LSM4_ORYSJ  (Q9LGE6), 
LSM4_SCHPO  (O14352), LSM4_TOBAC  (Q43582), LSM4_YEAST  (P40070), 
LSM5_ARATH  (Q9FKB0), LSM5_BOVIN  (Q2HJH0), LSM5_DICDI  (Q55EX5), 
LSM5_HUMAN  (Q9Y4Y9), LSM5_MOUSE  (P62322), LSM5_PONAB  (Q5R628), 
LSM5_SCHPO  (O42978), LSM5_YEAST  (P40089), LSM6A_ARATH (Q9M1Z3), 
LSM6B_ARATH (O22823), LSM6_AJECN  (A6R363), LSM6_ASPCL  (A1CE19), 
LSM6_ASPFU  (Q4WNI0), LSM6_BOTFB  (A6S5C9), LSM6_CANGA  (Q6FYB6), 
LSM6_CHAGB  (Q2HAN0), LSM6_COCIM  (Q1DRN0), LSM6_COPC7  (A8NHT8), 
LSM6_CRYNB  (P0CR25), LSM6_CRYNJ  (P0CR24), LSM6_DEBHA  (Q6BR90), 
LSM6_DICDI  (Q552U1), LSM6_EREGS  (Q75BR7), LSM6_HUMAN  (P62312), 
LSM6_KLULA  (Q6CPS7), LSM6_LACBS  (B0DWN3), LSM6_LODEL  (A5DRQ6), 
LSM6_MAGO7  (A4RQ29), LSM6_MOUSE  (P62313), LSM6_NEOFI  (A1DM27), 
LSM6_NEUCR  (A7UXE4), LSM6_PHANO  (Q0UWI9), LSM6_SCHPO  (Q9UUI1), 
LSM6_SCLS1  (A7F5M4), LSM6_USTMA  (Q4PG71), LSM6_VANPO  (A7TK72), 
LSM6_YEAS7  (A6ZYX7), LSM6_YEAST  (Q06406), LSM7_ARATH  (Q9SI54), 
LSM7_DICDI  (Q54HF6), LSM7_HUMAN  (Q9UK45), LSM7_MOUSE  (Q9CQQ8), 
LSM7_SCHPO  (O74499), LSM7_YEAST  (P53905), LSM8_ARATH  (Q8VYI0), 
LSM8_BOVIN  (Q3ZCE0), LSM8_DICDI  (Q1ZXD5), LSM8_HUMAN  (O95777), 
LSM8_MOUSE  (Q6ZWM4), LSM8_PONAB  (Q5RCP3), LSM8_SCHPO  (O74483), 
LSM8_YEAST  (P47093), LSMD1_DANRE (A2BIG9), LSMD1_HUMAN (Q9BRA0), 
LSMD1_MOUSE (Q9D2U5), LSMD1_XENTR (A4IGZ4), LSMH_ENCCU  (Q8SQH7), 
NAA38_SCHPO (O43080), NAA38_YEAST (P23059), PBP1_TRYB2  (Q57UZ7), 
PBP1_YEAST  (P53297), RSMB_BOVIN  (Q58DW4), RSMB_CAEEL  (P91918), 
RSMB_CHICK  (Q9PV94), RSMB_DICDI  (Q55A45), RSMB_DROME  (Q05856), 
RSMB_ERIEU  (Q9TU67), RSMB_HUMAN  (P14678), RSMB_MONDO  (Q9TU66), 
RSMB_MOUSE  (P27048), RSMB_NOTEU  (Q9N1Q0), RSMB_RAT(P17136), 
RSMB_SCHPO  (Q10163), RSMB_YEAST  (P40018), RSMN_BOVIN  (Q17QN3), 
RSMN_HUMAN  (P63162), RSMN_MACFA  (Q60HD3), RSMN_MOUSE  (P63163), 
RSMN_PONAB  (Q5R6I0), RSMN_RAT(P63164), RUXE_BOVIN  (A4FUI2), 
RUXE_CAEBR  (A8XDT0), RUXE_CAEEL  (Q9XTU6), RUXE_CHICK  (P62303), 
RUXE_DANRE  (Q7ZUG0), RUXE_DROME  (Q9VLV5), RUXE_HUMAN  (P62304), 
RUXE_MOUSE  (P62305), RUXE_PIG(A1XQR9), RUXE_SCHPO  (Q9USZ3), 
RUXE_YEAST  (Q12330), RUXF_ARATH  (Q9SUM2), RUXF_BOVIN  (Q3T0Z8), 
RUXF_CAEEL  (P34659), RUXF_DICDI  (Q54XP2), RUXF_DROME  (Q24297), 
RUXF_HUMAN  (P62306), RUXF_MOUSE  (P62307), RUXF_NEUCR  (Q9P5Z8), 
RUXF_SCHPO  (O59734), RUXF_XENLA  (P62321), RUXF_YEAST  (P54999), 
RUXGL_HUMAN (A8MWD9), RUXG_ARATH  (O82221), RUXG_BOVIN  (Q3ZBL0), 
RUXG_CAEEL  (Q9N4G9), RUXG_DICDI  (Q54RX0), RUXG_DROME  (Q9VXE0), 
RUXG_HUMAN  (P62308), RUXG_MEDSA  (P24715), RUXG_MOUSE  (P62309), 
RUXG_SCHPO  (O74966), RUXG_YEAST  (P40204), RUXX_AERPE  (Q9YEQ5), 
RUXX_ARCFU  (O29386), RUXX_METAC  (Q8TL47), RUXX_METAR  (Q0W8R9), 
RUXX_METBF  (Q465S1), RUXX_METBU  (Q12U30), RUXX_METMA  (Q8PZZ9), 
RUXX_METTH  (O26745), RUXX_PYRAB  (Q9V0Y8), RUXX_PYRFU  (Q8U0P4), 
RUXX_PYRHO  (O74016), RUXX_THEAC  (P57670), RUXX_THEGJ  (C5A1H1), 
RUXX_THEKO  (Q5JIE0), RUXX_THEON  (B6YUU5), RUXX_THESM  (C6A1T2), 
RUXX_THEVO  (Q97BU5), SCD6_YEAST  (P45978), SMD1A_ARATH (Q9SSF1), 
SMD1B_ARATH (Q9SY09), SMD1_BOVIN  (Q3ZC10), SMD1_CAEEL  (Q10013), 
SMD1_DROME  (Q9VU02), SMD1_HUMAN  (P62314), SMD1_MACFA  (Q4R5F6), 
SMD1_MOUSE  (P62315), SMD1_SCHPO  (O42661), SMD1_YEAST  (Q02260), 
SMD2_BOVIN  (Q3SZF8), SMD2_CAEEL  (Q18786), SMD2_DICDI  (Q54NC5), 
SMD2_DROME  (Q9VI10), SMD2_HUMAN  (P62316), SMD2_MOUSE  (P62317), 
SMD2_SCHPO  (O14036), SMD2_YEAST  (Q06217), SMD3A_ARATH (Q9S7E6), 
SMD3B_ARATH (Q9LM92), SMD3_CAEEL  (Q17348), SMD3_DROME  (O44437), 
SMD3_HUMAN  (P62318), SMD3_MOUSE  (P62320), SMD3_SCHPO  (Q9UUC6), 
SMD3_XENLA  (P62323), SMD3_YEAST  (P43321), SMDL_DICDI  (Q54HH8), 
SUM2_SCHPO  (Q9HGL3), Y1015_DICDI (Q54F84), Y1435_METJA (Q58830)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

PDB
[Detailed view]

179 PDB

1B34; 1D3B; 1H64; 1HK9; 1I4K; 1I5L; 1I81; 1JBM; 1JRI; 1LOJ; 1M8V; 1MGQ; 1N9R; 1N9S; 1U1S; 1U1T; 1Y96; 2QTX; 2RM4; 2VC8; 2Y90; 2YHT; 2YLB; 2YLC; 3AHU; 3BW1; 3CW1; 3GIB; 3HSB; 3INZ; 3JB9; 3JCM; 3JCR; 3M4G; 3PGW; 3QHS; 3QO3; 3QUI; 3RER; 3RES; 3SWN; 3VU3; 4A53; 4A54; 4C8Q; 4C92; 4EMG; 4EMH; 4EMK; 4F7U; 4J5Y; 4J6W; 4J6X; 4J6Y; 4JRI; 4JRK; 4JUV; 4M75; 4M77; 4M78; 4M7A; 4M7D; 4MMK; 4MML; 4N0A; 4PJO; 4RCB; 4RCC; 4V2S; 4V98; 4WZJ; 4X9C; 4X9D; 4Y91; 5DY9; 5GAM; 5GAN; 5GAO; 5GM6; 5GMK; 5I21; 5LJ3; 5LJ5; 5LQW; 5MPS; 5MQ0; 5MQF; 5NEW; 5NRL; 5O9Z; 5SZD; 5SZE; 5UK7; 5VSU; 5WSG; 5XJC; 5XJL; 5XJQ; 5XJR; 5XJS; 5XJT; 5XJU; 5Y88; 5YLZ; 5YZG; 5Z56; 5Z57; 5Z58; 5ZWM; 5ZWN; 5ZWO; 6AH0; 6AHD; 6ASO; 6BDG; 6BK8; 6EXN; 6F9W; 6FF7; 6G90; 6GWK; 6ICZ; 6ID0; 6ID1; 6J6G; 6J6H; 6J6N; 6J6Q; 6N7P; 6N7R; 6N7X; 6O1K; 6O1L; 6O1M; 6PPN; 6PPP; 6PPQ; 6PPV; 6QDV; 6QLB; 6QW6; 6QX9; 6V4X; 6XYJ; 6Y3Z; 6Y53; 6Y5Q; 6YGA; 6YGB; 6YGC; 6YGD; 7A5P; 7ABG; 7ABI; 7B0Y; 7B9V; 7BBL; 7DCO; 7DVQ; 7EVO; 7L1K; 7MX2; 7OG8; 7OGM; 7OGW; 7OH8; 7OQB; 7OQC; 7OQE; 7QTT; 7VPX; 7W59; 7W5A; 7W5B; 8BVJ; 8BVM; 8C6J; 8CH6; 8HK1
» more