PROSITE entry PS52049
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS52049
Direct ScanProsite submission
General information about the entry
| Entry name [info] | ULD |
| Accession [info] | PS52049 |
| Entry type [info] | MATRIX |
| Date [info] |
27-NOV-2024 CREATED;
27-NOV-2024 DATA UPDATE; 27-NOV-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC52049 |
| Associated ProRule [info] | PRU01394 |
Name and characterization of the entry
| Description [info] | UCH37-like (ULD) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=29; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=27; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2664845; R2=0.0070832; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=1092; N_SCORE=10.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=598; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-47; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='N'; M=-111,-119, 78, -79,-128,-102, -93,-127, -95,-131,-121, 116,-119, -99,-106, -83, -93,-127,-146,-119; /M: SY='Y'; M=-120,-126,-121,-122, 77,-126, 42,-103,-103, -87, -98,-118,-131,-114,-113,-115,-114,-108, -10, 123; /M: SY='V'; M= -77, -94, 29, 16, -68, 0,-117, 36,-103, 15, -10, -67,-118,-109,-118, -63, 36, 52,-126, -13; /M: SY='P'; M= -65,-134, -51, -1, -99, 39,-111,-125, -86,-128,-119, -91, 118, -29,-106, -64, -89,-127,-126,-128; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='F'; M= 12, -89,-132,-126, 110,-125,-115, -68,-123, 28, 27,-123,-129,-127,-122,-117, -84, -50, -97, -72; /M: SY='I'; M= -46, -17,-132,-128, -12,-106,-129, 92,-125, 10, -44,-118,-124,-123,-127,-100, -65, 51,-122, -84; /M: SY='H'; M= -88, 48, -98, 26, 8, -71, 82, -2, -34, -25, 47, -75,-120, -17, 30, -68, -37, 19,-120, 34; /M: SY='E'; M= 10, -15, -57, 66,-118, -67, -16,-108, -10, 10, -73, 33,-112, 27, -51, -3, 44, -74,-128,-114; /M: SY='W'; M= -65,-120,-129,-123, 69,-123,-116, -18,-120, 53, 11,-122,-127,-118,-120, 28, -84, -43, 102, 8; /M: SY='L'; M= -95,-118,-128,-120, -26,-131,-117, 39, 21, 72, 40,-123,-126,-114,-114,-120, -81, 20,-120,-102; /M: SY='K'; M= -62,-121, -80, -34,-116, -50, -62, -73, 73, 16, -43, -30,-115, 18, 40, 22, 21, -36,-123, -98; /M: SY='M'; M= 15, 27,-117, -22, -28, -17, -3, 29, 13, 23, 69, -63,-119, 3, -32, -18, -1, -18, -57, -72; /M: SY='L'; M= -95,-116,-131,-124, -62,-132,-116, -51,-124, 87, 51,-128,-129,-118,-121, -79, -90, 28,-120, -69; /M: SY='A'; M= 90,-113, -71, -49, -85, -43, 41, -98, 26,-115, -70, -70,-114, -14, -96, -39, -51, -39,-124, -88; /M: SY='E'; M= -42,-126, 53, 77,-129, -82, -20,-128, 43,-119, -76, -8,-110, 35, 17, -29, -57, -98,-129,-106; /M: SY='K'; M= -30, -77, -46, 54,-120, -86, 47,-126, 58,-105, -61, 1,-113, 45, 54, -24, -44,-111,-125, -39; /M: SY='G'; M= -67,-124, -7, -40,-125, 88, -61, 20, 19,-121, -43, -6,-115, 8, -56, -54,-111,-116,-123,-119; /M: SY='Q'; M= -37, -86, 35, 20, -43, -88, 19, -34, 43, 10, 4, -50,-116, 52, -20, -42, -32, 29,-126, -95; /M: SY='L'; M= -86, -81, -99,-117, -57,-103,-114, -40, 26, 89, -9,-124, -93, -49, -84,-121,-110, -67,-119,-102; /I: I=-14; MD=-37; /M: SY='N'; M= 8, -80, 25, 42,-111, -22, -37, -19, 20, -45, -11, 47, -44, 23, -5, -13, -22, -2, -78,-115; D=-14; /I: I=-14; MI=0; MD=-37; IM=0; DM=-37; /M: SY='P'; M= -21,-126, 44, 41, -90, 2, -36,-114, -7,-110,-101, -15, 71, -12, -26, -16, 36,-112,-131,-110; D=-14; /I: I=-14; DM=-37; /M: SY='W'; M= 20, -65,-129,-109, -51,-124, -96, -2,-107, 66, 15, -96,-115, -22, -46, -32, -69, -4, 97, -87; D=-14; /I: I=-14; DM=-37; /M: SY='V'; M= -43, -63,-120, -85, -54,-126, -14, 55, -61, 25, -5, 40,-106, -83, -96, -89, -38, 58, -87, 20; D=-14; /I: I=-14; DM=-37; /M: SY='E'; M= 4, -80, 25, 72,-101, -49, -43, -91, 9, -87, -70, -3, -47, 34, -43, 38, -11, -80,-129, -77; /M: SY='Q'; M= 3, -92, 2, 31, -89, -39, -35, -98, 47, -58, -92, 11, -52, 55, 8, -30, 40, -73, -55, -49; /M: SY='A'; M= 69,-106, -38, -32, -61, -47, 22, -44, -32, 14, -45, 1, -65, 3, -60, -4, -26, -9, -82, -79; /M: SY='K'; M= -61, -71, -32, 37, -65, -67, -32, -34, 64, -9, 1, -49, -44, 32, 18, -8, -27, -52, -86, -56; /M: SY='Q'; M= 5, -69, 5, 38, -73, -31, -38, -64, 12, -27, -57, -20, -42, 43, -33, -2, 40, -74,-133, -77; /M: SY='K'; M= 31, -80, -52, -27, -78, -39, -38, -51, 55, -45, -15, -18, -22, 6, 21, -26, -17, -23, -65, -63; /I: E1=0; IE=-255; DE=-255;» more |
Post-processing [info]
| PROMOTED_BY | PS52048 |
Numerical results [info]
| Total number of hits | 32 in 32 different sequences |
| Number of true positive hits | 32 in 32 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | ULD |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
32 sequences
BAP1_BOVIN (A2VDM8), BAP1_BRAFL (C4A0D9), BAP1_CHICK (Q5F3N6), BAP1_DANRE (A1L2G3), BAP1_HUMAN (Q92560), BAP1_MOUSE (Q99PU7), BAP1_RAT(D3ZHS6), BAP1_XENLA (Q52L14), BAP1_XENTR (Q66JB6), CALYP_AEDAE (Q17N72), CALYP_CULQU (B0W2R4), CALYP_DROAN (B3MIV9), CALYP_DROER (B3NPV7), CALYP_DROGR (B4JW98), CALYP_DROME (Q7K5N4), CALYP_DROMO (B4KT51), CALYP_DROPE (B4GAM2), CALYP_DROPS (Q291J4), CALYP_DROSE (B4HST0), CALYP_DROSI (B4QHH0), CALYP_DROVI (B4LQ24), CALYP_DROYA (B4P6P6), UBH4_CAEEL (Q09444), UBLH2_SCHPO (Q9UUB6), UCH1_ARATH (Q9FFF2), UCH2_ARATH (O04482), UCH37_PLAF7 (Q8IIJ6), UCHL5_BOVIN (Q9XSJ0), UCHL5_DICDI (Q54N38), UCHL5_HUMAN (Q9Y5K5), UCHL5_MOUSE (Q9WUP7), UCHL5_PIG (Q06AT3)» more
|
| PDB [Detailed view] |
12 PDB
pdb_00003ihr; pdb_00004uel; pdb_00004uem; pdb_00004uf5; pdb_00004uf6; pdb_00004wlp; pdb_00004wlq; pdb_00004wlr; pdb_00006cga; pdb_00006hgc; pdb_00008h1t; pdb_00008svf |