PROSITE entry PS60009
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PURL: https://purl.expasy.org/prosite/signature/PS60009
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CYCLOTIDE_MOEBIUS |
| Accession [info] | PS60009 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2004 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51052 |
Name and characterization of the entry
| Description [info] | Cyclotides Moebius subfamily signature. |
| Pattern [info] |
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C. |
Numerical results [info]
| Total number of hits | 64 in 58 different sequences |
| Number of true positive hits | 64 in 58 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 16 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 3 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 5 |
| Site [info] | disulfide at position 10 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
58 sequences
CYC18_CLITE (C0HJS5), CYC3_CLITE (C0HKG1), CYCM_CLITE (P86899), CYCN_CLITE (P86900), CYH3_VIOHE (P85232), CYMBA_MELOB (C0HKJ7), CYMC2_MELCT (C0HK36), CYMC3_MELCT (C0HK37), CYMC7_MELCT (C0HK41), CYMEA_MELDN (C0HKI4), CYMEB_MELDN (C0HKI5), CYMNA_MELAG (C0HKI3), CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYPLA_PSYBR (C0HL24), CYPLA_PSYLE (C0HL27), CYPLB_PSYBR (C0HL25), CYPLB_PSYLE (C0HL28), CYPLC_PSYLE (C0HL29), CYPLD_PSYBR (C0HL26), CYPLD_PSYLE (C0HL30), CYPLE_PSYLE (C0HL31), CYVA_VIOBI (P85239), CYVB_VIOBI (P85240), CYVNA_VIOIN (C0HKK1), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF (P56254), KAB2_OLDAF (P58454), KAB3_OLDAF (P58455), KAB4_OLDAF (P83938), KAB7_OLDAF (P58457), KAB9_OLDAF (P85127), KABS_OLDAF (P58458), TRIC_VIOAR (P0C589), VARA_VIOAR (P58446), VARA_VIOBI (P85525), VARA_VIOOD (Q5USN7), VARB_VIOAR (P58447), VARC_VIOAR (P58448), VARD_VIOAR (P58449), VARF_VIOAR (P58451), VARG_VIOAR (P58452), VARH_VIOAR (P58453), VHL2_VIOHE (P85231), VODM_VIOOD (P83839), VODN_VIOOD (P83838)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
16 sequences
CYC15_CLITE (C0HJS2), CYC19_CLITE (C0HJS6), CYC20_CLITE (C0HJS7), CYGPC_GLOPU (C0HL37), CYML1_MELLF (C0HK28), CYML2_MELLF (C0HK29), CYML3_MELLF (C0HK30), CYML4_MELLF (C0HK31), CYML5_MELLF (C0HK32), CYML6_MELLF (C0HK33), CYML7_MELLF (C0HK34), CYO14_VIOOD (P85177), CYVC_VIOBI (P85241), CYVD_VIOBI (P85242), KAB12_OLDAF (P85130), VIOLA_VIOOD (Q2HY54)» more |
| PDB [Detailed view] |
28 PDB
1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JUE; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO; 7LHC; 7RFA; 8TYI » more |