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Entry: PS60030 |
Entry name [info] | BACTERIOCIN_IIA |
Accession [info] | PS60030 |
Entry type [info] | PATTERN |
Date [info] |
01-MAR-2006 CREATED;
01-MAR-2006 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC60030 |
Description [info] | Bacteriocin class IIa family signature. |
Pattern [info] |
Y-G-N-G-[VL]-x-C-x(4)-C. |
Total number of hits | 23 in 23 different sequences |
Number of true positive hits | 23 in 23 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 5 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 82.14 % |
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
23 sequences
BACT_LACSP (P86291 ), BAVM_LACSK (P80493 ), BCN80_BACCI (P86394 ), CBB1_CARML (P38579 ), CBB2_CARML (P38580 ), DIV35_CARDV (P84962 ), ETCHF_ENTFC (P86183 ), ETCM_ENTFC (P85876 ), ETCP_ENTFC (O30434 ), HJM79_ENTHR (Q0Z8B6 ), LCCA_LEUGE (P34034 ), LCCB_LEUCA (Q53446 ), LCCC_LEUME (P81053 ), LCNM_LACLL (P83002 ), MTCY_LEUME (P38577 ), MUTI_ENTMU (P80925 ), PIS1_CARML (P80569 ), PPA1_PEDAC (P29430 ), SAKA_LACCU (P0A311 ), SAKA_LACSK (P0A310 ), SAKP_LACSK (P35618 ), UBAA_STRUB (A9Q0M7 ), WSNA_WEIPA (B3A0N4 )» more
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UniProtKB/Swiss-Prot False negative sequences |
5 sequences
BACT_STRMG (P86386 ), BCN02_PAEPO (P86393 ), BCN37_PAEPO (P86395 ), CURVA_LACCU (P84886 ), ETC50_ENTFC (P85148 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
BAVA_LACSK (P80953 ) |
PDB [Detailed view] |
11 PDB
1CW5; 1CW6; 1OG7; 1OHM; 1OHN; 1RY3; 2A2B; 2LEU; 2N4K; 3LEU; 5UKZ |