PROSITE entry PS00197
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Direct ScanProsite submission
General information about the entry
Entry name [info] | 2FE2S_FER_1 |
Accession [info] | PS00197 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-1991 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00175 |
Name and characterization of the entry
Description [info] | 2Fe-2S ferredoxin-type iron-sulfur binding region signature. |
Pattern [info] |
C-{C}-{C}-[GA]-{C}-C-[GAST]-{CPDEKRHFYW}-C. |
Numerical results [info]
Total number of hits | 361 in 356 different sequences |
Number of true positive hits | 296 in 295 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 64 in 60 different sequences |
Number of false negative sequences | 123 |
Number of 'partial' sequences | 12 |
Precision (true positives / (true positives + false positives)) | 82.22 % |
Recall (true positives / (true positives + false negatives)) | 70.64 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Site [info] | iron_sulfur at position 1 |
Site [info] | iron_sulfur at position 6 |
Site [info] | iron_sulfur at position 9 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
295 sequences
ALDO1_ARATH (Q7G193), ALDO1_MAIZE (O23887), ALDO1_ORYSJ (Q7XH05), ALDO2_ARATH (Q7G192), ALDO2_MAIZE (O23888), ALDO2_ORYSJ (Q852M1), ALDO3_ARATH (Q7G9P4), ALDO3_ORYSJ (Q852M2), ALDO4_ARATH (Q7G191), ALDO4_ORYSJ (Q69R21), ANTDC_ACIAD (O85675), AOXA_BOVIN (P48034), AOXA_CAVPO (H9TB17), AOXA_HUMAN (Q06278), AOXA_MACFA (Q5FB27), AOXA_MOUSE (O54754), AOXA_RABIT (P80456), AOXA_RAT(Q9Z0U5), AOXB_CAVPO (H9TB19), AOXB_MACFA (C4NYZ3), AOXB_MOUSE (Q5SGK3), AOXB_RAT(Q5QE78), AOXC_MOUSE (G3X982), AOXC_RAT(Q5QE80), AOXD_CAVPO (H9TB18), AOXD_MOUSE (Q3TYQ9), AOXD_RAT(Q5QE79), ASCD_YERPE (P68641), ASCD_YERPS (Q66DP5), BENC_ACIAD (P07771), CARAD_PSERE (Q8GI14), CBAB_COMTE (Q44257), CBDC_BURCE (Q51603), CDHC_PSEU3 (D7REY5), CNTB_ACIB2 (D0C9N8), CNTB_ACIP2 (F0KFI7), CNTB_ECOLI (P76254), DMPP_ACIP2 (Q7WTJ2), DMPP_PSEUF (P19734), DNTAA_BURSR (Q45692), FDB41_GIBM7 (W7MSJ7), FER1_APHFL (P00244), FER1_AQUAE (O67065), FER1_ARATH (O04090), FER1_CYACA (Q9TLW0), FER1_CYAPA (P17007), FER1_DESMC (P00252), FER1_DUNSA (P00239), FER1_EQUAR (P00235), FER1_EQUTE (P00234), FER1_HALMA (P00217), FER1_HYONI (P84873), FER1_LEPBY (Q51577), FER1_MAIZE (P27787), FER1_MESCR (O04683), FER1_NOSS1 (P0A3C7), FER1_NOSSO (P0A3C8), FER1_ORYSI (A2YQD9), FER1_ORYSJ (Q0J8M2), FER1_PEA(P09911), FER1_PHYAM (P00229), FER1_PHYAN (P00230), FER1_PICP2 (P31965), FER1_RAPSA (P14936), FER1_SOLLC (Q43517), FER1_SPIOL (P00221), FER1_SYNE7 (P0A3D2), FER1_SYNP6 (P0A3D3), FER1_TRIV2 (P00254), FER2_APHSA (P00251), FER2_ARATH (P16972), FER2_CYACA (P15789), FER2_DESMC (P00249), FER2_DUNSA (P00240), FER2_EQUAR (P00237), FER2_EQUTE (P00236), FER2_HALMA (Q5UZ63), FER2_HYONI (P84874), FER2_LEPBY (P46035), FER2_MAIZE (O80429), FER2_PHYAM (P00231), FER2_PHYAN (P00232), FER2_RAPSA (P14937), FER2_SPIOL (P00224), FER2_SYNP6 (P08451), FER3_ARATH (Q9ZQG8), FER3_CYACA (P00241), FER3_MAIZE (P27788), FER3_RAPSA (P14938), FER4_ARATH (Q9FIA7), FER4_RHOCA (P0CY92), FER4_RHOCB (D5ARY7), FER5_MAIZE (P27789), FER5_RHOCA (P37097), FER6_MAIZE (P94044), FERA_ALOMA (P81372), FERB_ALOMA (P81373), FERH_MICDP (P28610), FERH_NOSS1 (P11053), FERH_TRIV2 (P46046), FERN_PSEPU (P23263), FERV_TRIV2 (P46047), FERX_PSEPU (P23103), FER_ALKOR (P83524), FER_APHSA (P00250), FER_ARCLA (P00223), FER_ARTPT (P00246), FER_ATRBE (P84872), FER_BACTR (A0A0F5HNC1), FER_BRANA (P00227), FER_BRUAR (P83520), FER_BRYMA (P07838), FER_BUMFI (P13106), FER_CAPAA (P83527), FER_CAPAN (Q9ZTS2), FER_CHLFR (P00247), FER_CHLRE (P07839), FER_COLES (P00222), FER_DATIN (P68163), FER_DATME (P68164), FER_DATQU (P68166), FER_DATST (P68165), FER_DESMC (P00253), FER_EUGVI (P22341), FER_GLEJA (P00233), FER_GUITH (O78510), FER_HALP7 (P15788), FER_HALSA (P00216), FER_HORVU (P83522), FER_LEULE (P00225), FER_LIMMA (P00245), FER_LYCCN (P83523), FER_MARPO (P09735), FER_MASLA (P00248), FER_MEDSA (P00220), FER_NEOYE (Q1XDG7), FER_PALPL (P07484), FER_PANGI (P85121), FER_PERBI (P10770), FER_PHYPA (O04166), FER_PLAF7 (Q8IED5), FER_PORPU (P51320), FER_PORUM (P00242), FER_SAMNI (P00226), FER_SCEFU (P56408), FER_SCEQU (P00238), FER_SCOJA (P83525), FER_SILLB (P04669), FER_SOLAB (P83585), FER_SOLLS (P83584), FER_SOLLY (P83583), FER_SOLNI (P83582), FER_SYNEL (P0A3D0), FER_SYNY3 (P27320), FER_SYNY4 (P00243), FER_THAWE (O98450), FER_THELV (P00255), FER_THEVB (P0A3C9), FER_THEVL (P0A3D1), FER_TOBAC (P83526), FER_TRICV (P49522), FER_WHEAT (P00228), FESII_AZOVI (Q44501), FPOO_METMA (F1SVE1), FRDB_ECO57 (P0AC49), FRDB_ECOL6 (P0AC48), FRDB_ECOLI (P0AC47), FRDB_HAEIN (P44893), FRDB_HELPJ (Q9ZMP1), FRDB_HELPY (O06914), FRDB_PROVU (P20921), FRDB_SHIFL (P0AC50), FRDB_WOLSU (P17596), GAD3_CAEEL (Q960A1), GBMOR_CHRSD (Q1QYU6), GBMOR_PSEAB (A0A0H2ZJB2), GBMOR_PSEAE (Q9HTF3), GCOB_AMYS7 (P0DPQ8), HCRC_THAAR (O33818), IORA_BREDI (Q51697), KDHB_PAENI (O87682), KSHB_MYCS2 (A0R525), KSHB_MYCTO (P9WJ92), KSHB_MYCTU (P9WJ93), KSHB_RHORH (B6V6V6), MDPK_AQUTE (G8FRC6), MFRB_WOLSU (Q7M826), MIMB_MYCGD (E9RFT0), MIMB_MYCS2 (A0QTU9), MMOC_METCA (P22868), MOP_MEGGA (Q46509), MSMD_METHY (Q9X406), NAGAA_RALSP (O52378), NDHS_PAENI (Q59128), NDMD_PSEPU (H9N291), NDOR_PSEPU (Q52126), NDSFS_EUBBA (Q0QLF3), NFXL2_ARATH (Q9FFK8), NICA_PSEPK (Q88FX9), PAAE_ECOLI (P76081), PAOA_ECO57 (Q8X6I9), PAOA_ECOLI (P77165), PCPD_SPHCR (Q47914), PDR_BURCE (P33164), PHT2_PSEPU (Q05182), POBB_PSEOL (Q52186), PRMB_RHOJR (Q0SJK8), PYRK_ARCFU (O29722), PYRK_METAC (P58886), PYRK_METAR (Q0W8E0), PYRK_METBF (Q46CG8), PYRK_METBU (Q12WN0), PYRK_METJA (Q58841), PYRK_METKA (P58887), PYRK_METMA (Q8PW55), PYRK_METTH (O27280), PYRK_PYRAB (Q9UXV5), PYRK_PYRFU (P58888), PYRK_PYRHO (O57738), PYRK_THEKO (Q5JJ90), RFBI_SALTY (P26395), SDHB1_ARATH (Q8LBZ7), SDHB1_ORYSJ (Q9S827), SDHB2_ARATH (Q8LB02), SDHB2_ORYSJ (Q6H4G3), SDHB3_ARATH (Q9FJP9), SDHB_ASCSU (O44074), SDHB_BOVIN (Q3T189), SDHB_CAEBR (A8WPF0), SDHB_CAEEL (Q09545), SDHB_CANGA (Q6FWS8), SDHB_CHICK (Q9YHT2), SDHB_CHOCR (P48932), SDHB_CYACA (P48933), SDHB_DANRE (A5PL98), SDHB_DICDI (Q55CC2), SDHB_DROME (P21914), SDHB_EREGS (Q75CI4), SDHB_HUMAN (P21912), SDHB_MOUSE (Q9CQA3), SDHB_PARDE (Q59662), SDHB_PIG(Q007T0), SDHB_PORPU (P80477), SDHB_RAT(P21913), SDHB_RECAM (P80480), SDHB_RICBR (Q1RGP3), SDHB_RICCN (Q92JJ8), SDHB_RICFE (Q4UN71), SDHB_RICPR (Q9ZEA1), SDHB_RICTY (Q68XS0), SDHB_SCHPO (P21911), SDHB_UROFA (Q70KF8), SDHB_USTMA (P32420), SDHB_XENLA (Q3B8J8), SDHB_XENTR (B0BM36), SDHB_YEAST (P21801), SDHB_ZYMTR (O42772), TFRB_METTM (D9PUX5), TMOF_PSEME (Q03304), TPDR1_COMSP (Q3C1E0), TPDR2_COMSP (Q3C1D2), TSAB1_COMTE (P94680), TSAB2_COMTE (Q9AHG2), VANB_ACIAD (O24840), VANB_PSEPU (O54037), VANB_PSES9 (P12580), VANB_PSEUH (O05617), XAMOF_XANP2 (A7IPX7), XDH1_ARATH (Q8GUQ8), XDH2_ARATH (F4JLI5), XDHE_BACSU (O32143), XDH_BLAAD (R4ZGN4), XDH_BOVIN (P80457), XDH_CALVI (P08793), XDH_CHICK (P47990), XDH_DICDI (Q54FB7), XDH_DROME (P10351), XDH_DROPS (P22811), XDH_DROSU (P91711), XDH_EMENI (Q12553), XDH_FELCA (Q9MYW6), XDH_HUMAN (P47989), XDH_MOUSE (Q00519), XDH_ORYSJ (Q6AUV1), XDH_RAT (P22985), XYLA_PSEPU (P21394), XYLZ_PSEPU (P23101), Y092_METJA (Q57557), Y1067_METMP (Q6LYC4), Y1309_HAEIN (P45154), Y166_BUCBP (Q89AS6), Y177_BUCAI (P57274), YCBX_ECOLI (P75863), YFAE_ECOL6 (P0ABW4), YFAE_ECOLI (P0ABW3)» more
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UniProtKB/Swiss-Prot False negative sequences |
123 sequences
CSMI_CHLTE (O68988), CSMJ_CHLTE (O68983), CUTC_SULAC (Q4J6M5), DCMS_AFIC5 (P19921), DCMS_HYDPS (P19915), DESET_MYCTO (P9WNE8), DESET_MYCTU (P9WNE9), FER_TRIVA (P21149), FRDB_MYCTO (P9WN88), FRDB_MYCTU (P9WN89), HCNA_PSEAE (G3XD67), HCNA_PSEPH (O85226), HCR_ECOLI (P75824), HNDD_SOLFR (Q46508), HOXU_CUPNH (P22318), HYDA_THEMA (O52683), MMOC_METTR (Q53563), MVHD_METTH (Q50781), MVHD_METTM (P60238), NDUS1_ACACA (Q37373), NDUS1_ARATH (Q9FGI6), NDUS1_BOVIN (P15690), NDUS1_DICCI (Q2LCP5), NDUS1_DICDI (Q34312), NDUS1_DROME (Q94511), NDUS1_HUMAN (P28331), NDUS1_MESAU (P86203), NDUS1_MOUSE (Q91VD9), NDUS1_NEUCR (P24918), NDUS1_PONAB (P0CB67), NDUS1_PONPY (P0CB68), NDUS1_RECAM (O21241), NDUS1_SOLTU (Q43644), NQO3_PARDE (P29915), NQO3_THET8 (Q56223), NQRF_ACTP2 (A3MYM7), NQRF_ACTSZ (A6VLY1), NQRF_CHLCV (Q821Q3), NQRF_CHLFF (Q255Y6), NQRF_CHLMU (Q9PLI3), NQRF_CHLPN (Q9Z723), NQRF_CHLTA (Q3KKV3), NQRF_CHLTR (O84745), NQRF_HAEDU (Q7VNU4), NQRF_HAEI8 (Q4QP19), NQRF_HAEIE (A5UAX6), NQRF_HAEIG (A5UFX3), NQRF_HAEIN (O05012), NQRF_HISS1 (Q0I5Y1), NQRF_IDILO (Q5QYQ8), NQRF_KLEP7 (A6T526), NQRF_MANSM (Q65VU9), NQRF_MARMS (A6VW13), NQRF_METCA (Q605A0), NQRF_NEIG1 (Q5F6X5), NQRF_NEIM0 (A9M2A6), NQRF_NEIMA (Q9JVQ3), NQRF_NEIMB (Q9K0M8), NQRF_NEIMF (A1KSH3), NQRF_PASMU (Q9CLA6), NQRF_PHOPO (Q9LCJ1), NQRF_PSEA6 (Q15YQ1), NQRF_PSEA7 (A6V3A2), NQRF_PSEAB (Q02PF8), NQRF_PSEAE (Q9HZL1), NQRF_PSYA2 (Q4FPV2), NQRF_PSYCK (Q1Q7Z7), NQRF_SERP5 (A8GAC4), NQRF_SHEDO (Q12QK1), NQRF_VIBAL (Q56584), NQRF_VIBAN (Q75R59), NQRF_VIBC1 (Q9RFV6), NQRF_VIBC3 (A5F5Y4), NQRF_VIBCH (Q9X4Q8), NQRF_VIBPA (Q9LCJ0), NQRF_VIBVU (Q8DBJ1), NQRF_VIBVY (Q7MID2), NQRF_YERE8 (A1JNZ2), NQRF_YERP3 (A7FLJ3), NQRF_YERPA (Q1C4D5), NQRF_YERPE (Q8ZBZ5), NQRF_YERPN (Q1CLD8), NQRF_YERPP (A4TPL2), NQRF_YERPS (Q66E01), NUOG2_RHIME (P56914), NUOG_BLOFL (Q7VRV7), NUOG_BUCAI (P57257), NUOG_BUCAP (Q8K9Y2), NUOG_BUCBP (Q89AU1), NUOG_ECO57 (Q8XCX2), NUOG_ECOL6 (Q8FFJ9), NUOG_ECOLI (P33602), NUOG_MYCBO (P59962), NUOG_MYCTO (P9WIV8), NUOG_MYCTU (P9WIV9), NUOG_PSEAE (Q9I0J6), NUOG_PSEFL (Q9KGW3), NUOG_PSEPK (Q88FH2), NUOG_PSESM (Q87ZQ4), NUOG_RICBR (Q1RKD2), NUOG_RICCN (Q92G92), NUOG_RICFE (Q4UK22), NUOG_RICPR (Q9ZCF6), NUOG_RICTY (Q68VV2), NUOG_SALTI (P0A1Y5), NUOG_SALTY (P0A1Y4), NUOG_SHEON (Q8EI34), NUOG_SHIFL (Q7UC56), NUOG_STRCO (Q9XAR0), NUOG_YERPE (Q8ZDL2), PHF1_CLOPA (P29166), PRMB_GORST (Q768T4), RAMQ_EUBLI (P0DX10), SDHB_ECOLI (P07014), SDHB_SALTY (Q8ZQU2), VHCD_ARCPA (P84624), VHCD_METVO (Q00405), VHUD_METJA (P81334), VHUD_METKA (Q8TXN5), VHUD_METMP (Q6LWL3), VHUD_METVO (Q00408), XDHC_ECO57 (Q8X6C4), XDHC_ECOLI (Q46801)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
12 sequences
FER2_PEA(Q7M258), FER_ANASL (P83156), FER_PORAE (P18820), FER_PORPP (P18821), HOXU_RHOOP (P22659), NQRF_ALTMA (Q9LCJ3), NQRF_COLMA (Q9K3E1), NQRF_COLPS (Q9LCJ2), NQRF_MORMI (Q9LCI9), NQRF_PSEHA (Q9LCJ4), NQRF_SHEHA (Q9LCI8), NQRF_SHEPU (Q9LCI7)» more |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
RNFB_METAC (Q8TSX9) |
UniProtKB/Swiss-Prot False positive sequences |
60 sequences
105R_ADES1 (A9CBA2), ANCHR_HUMAN (Q96K21), BRL1_SCHPO (Q1MTQ0), CADH1_OCIBA (Q2KNL5), CMLN_CUPSE (C0HLL6), DHB2_HUMAN (P37059), DR3_HHV6U (Q89660), EFEM_BACSU (P39596), ESP1_ARATH (Q5IBC5), FAP1H_SCHPO (O74853), FIZ1_HUMAN (Q96SL8), FIZ1_MOUSE (Q9WTJ4), GS_CATRO(W8JWW7), GUC2A_CAVPO (P70664), GUC2A_DIDVI (P55936), GUC2A_HUMAN (Q02747), GUC2A_MOUSE (P33680), GUC2A_NOTAL (Q8R5G9), GUC2A_PIG (P79897), GUC2A_RAT (P28902), HEPC_PIG(Q8MJ80), KDM2A_HUMAN (Q9Y2K7), KDM2A_MOUSE (P59997), KRA51_HUMAN (Q6L8H4), KRA55_HUMAN (Q701N2), KRUC_SHEEP (P26372), NFX1_DICDI (Q54BK0), NFXL1_XENLA (A0JMY5), NGN1_CAEEL (Q95XG7), RL32_CHLPN (Q9Z6U7), RL32_CHLTA (Q3KKN1), RL32_CHLTR (O84816), RN186_BOVIN (Q3T0Y9), RN186_HUMAN (Q9NXI6), RNF14_HUMAN (Q9UBS8), RNF14_MOUSE (Q9JI90), RRP44_CAEEL (Q17632), SERC4_HUMAN (A6NH21), SERC5_DANRE (Q803X0), SERC5_HUMAN (Q86VE9), SERC5_MOUSE (Q8BHJ6), SERC5_RAT (Q63175), SERIC_MONBE (A9UY97), SERIC_NEMVE (A7S4N4), SIVA_HUMAN (O15304), SIVA_MOUSE (O54926), SIVA_RAT(P59692), SPIR2_HUMAN (Q8WWL2), SPIR2_MOUSE (Q8K1S6), STC_DROME (P40798), SYFA_CHLAB (Q5L5A8), SYFA_CHLCV (Q822B5), SYFA_CHLMU (Q9PL83), SYFA_CHLTA (Q3KKK3), SYFA_CHLTR (O84843), TNR9_HUMAN (Q07011), VE6_BPV1(P06931), VE6_MNPVA (P30735), WDFY2_CAEBR (A8XXC7), WDFY2_CAEEL (Q18964)» more |
PDB [Detailed view] |
205 PDB
1A70; 1AWD; 1CZP; 1DOI; 1DOX; 1DOY; 1E0Z; 1E10; 1E7P; 1EWY; 1FIQ; 1FO4; 1FRD; 1FRR; 1FXA; 1FXI; 1GAQ; 1IUE; 1J7A; 1J7B; 1J7C; 1JQ4; 1KF6; 1KFY; 1KRH; 1L0V; 1N5X; 1OFF; 1QLB; 1QOB; 1QOF; 1QOG; 1QT9; 1RFK; 1RM6; 1ROE; 1SB3; 1SIJ; 1V97; 1VDV; 1VLB; 1WRI; 1WYG; 1YQ3; 1YQ4; 1ZOY; 1ZP0; 2B76; 2BS2; 2BS3; 2BS4; 2CJN; 2CJO; 2CKJ; 2E1Q; 2E3T; 2FBW; 2H88; 2H89; 2KAJ; 2MH7; 2N0S; 2PIA; 2PVG; 2PVO; 2WQY; 3ABV; 3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 3AED; 3AEE; 3AEF; 3AEG; 3AM9; 3AMZ; 3AN1; 3AV8; 3AX7; 3AX9; 3B2F; 3B2G; 3B9J; 3BDJ; 3CIR; 3ETR; 3EUB; 3FAH; 3FC4; 3HRD; 3L4P; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3P4P; 3P4Q; 3P4R; 3P4S; 3P63; 3SFD; 3SFE; 3SR6; 3UNA; 3UNC; 3UNI; 3VR8; 3VR9; 3VRA; 3VRB; 3W5U; 3W5V; 3ZYV; 4C7Y; 4C7Z; 4C80; 4FXC; 4UHW; 4UHX; 4US8; 4US9; 4USA; 4WQM; 4YRW; 4YSW; 4YSX; 4YSY; 4YSZ; 4YT0; 4YTM; 4YTN; 4YTP; 4YTY; 4YTZ; 4YXD; 4ZHO; 5AUI; 5AUK; 5C2T; 5C3J; 5EPG; 5FFI; 5FRT; 5G5G; 5G5H; 5H57; 5H5J; 5H8Y; 5H92; 5OGX; 5VPN; 5ZF0; 6A7X; 6ABU; 6AC1; 6AC4; 6AD4; 6ADJ; 6AJU; 6AWF; 6B03; 6B05; 6BRS; 6ICM; 6JO2; 6KHI; 6KUM; 6KV0; 6L7O; 6LK1; 6MYO; 6MYP; 6MYQ; 6MYR; 6MYS; 6MYT; 6MYU; 6Q6Q; 6YAC; 6YAV; 6YEZ; 7AKT; 7DQX; 7FIX; 7KCL; 7KCM; 7KLU; 7KLV; 7OPN; 7ORC; 7WZN; 8EMT; 8GS8; 8J79 » more |