PROSITE logo
Black ribbon
We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00205


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00205

Direct ScanProsite submission
General information about the entry

Entry name [info] TRANSFERRIN_LIKE_1
Accession [info] PS00205
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-JUN-1994 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00182

Name and characterization of the entry

Description [info] Transferrin-like domain signature 1.
Pattern [info] 
Y-x(0,1)-[VAS]-V-[IVAC]-[IVA]-[IVA]-[RKH]-[RKS]-[GDENSA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 71 in 43 different sequences
Number of true positive hits 63 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 88.73 %
Recall (true positives / (true positives + false negatives)) 96.92 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] iron at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

ICA_MOUSE   (Q9DBD0), ICA_PIG (Q29545), TRFE1_SALSA (P80426), 

TRFE2_SALSA (P80429), TRFEA_XENLA (P20233), TRFEB_XENLA (Q6PGT3), 
TRFE_ANAPL  (P56410), TRFE_BOVIN  (Q29443), TRFE_CHICK  (P02789), 
TRFE_GADMO  (Q92079), TRFE_HORSE  (P27425), TRFE_HUMAN  (P02787), 
TRFE_MOUSE  (Q921I1), TRFE_ONCKI  (P79815), TRFE_ORYLA  (P79819), 
TRFE_PANTR  (A5A6I6), TRFE_PAROL  (O93429), TRFE_PIG(P09571), 
TRFE_RABIT  (P19134), TRFE_RAT(P12346), TRFE_XENTR  (Q501K5), 
TRFL_BOVIN  (P24627), TRFL_BUBBU  (O77698), TRFL_CAMDR  (Q9TUM0), 
TRFL_CAPHI  (Q29477), TRFL_HORSE  (O77811), TRFL_HUMAN  (P02788), 
TRFL_MOUSE  (P08071), TRFL_PIG(P14632), TRFM_DROME  (Q9VTZ5), 
TRFM_HUMAN  (P08582), TRFM_MOUSE  (Q9R0R1), TRFM_RABIT  (O97490), 
TRF_BLADI   (Q02942), TRF_MANSE   (P22297)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

MYP_STRPU   (P19615), TRF_SARPE   (Q26643)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
TRFE_DRONO  (P85895)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			8 sequences
			


			
BIOD_YEAST  (P53630), BIOF_ARATH  (Q8GW43), HYALP_CAVPO (P23613), 

			
MURB_BORBR  (Q7WGH4), MURB_BORPA  (Q7W509), MURB_BORPE  (Q9X6Y8), 
RSH6A_HUMAN (Q9H0K4), RSH6A_MOUSE (Q8CDR2)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			194 PDB
			


			pdb_00001a8e; pdb_00001a8f; pdb_00001aiv; pdb_00001aov; pdb_00001b0l; pdb_00001b1x; pdb_00001b3e; pdb_00001b7u; pdb_00001b7z; pdb_00001biy; pdb_00001bka; pdb_00001blf; 
			
				pdb_00001bp5; pdb_00001btj; pdb_00001cb6; pdb_00001ce2; pdb_00001d3k; pdb_00001d4n; pdb_00001dot; pdb_00001dsn; pdb_00001dtg; pdb_00001dtz; pdb_00001eh3; pdb_00001f9b; 
				pdb_00001fck; pdb_00001fqe; pdb_00001fqf; pdb_00001gv8; pdb_00001gvc; pdb_00001h43; pdb_00001h44; pdb_00001h45; pdb_00001h76; pdb_00001hse; pdb_00001i6b; pdb_00001i6q; 
				pdb_00001iej; pdb_00001iq7; pdb_00001jnf; pdb_00001jqf; pdb_00001jw1; pdb_00001l5t; pdb_00001lcf; pdb_00001lct; pdb_00001lfg; pdb_00001lfh; pdb_00001lfi; pdb_00001lgb; 
				pdb_00001n04; pdb_00001n76; pdb_00001n7w; pdb_00001n7x; pdb_00001n84; pdb_00001nft; pdb_00001nkx; pdb_00001nnt; pdb_00001oqg; pdb_00001oqh; pdb_00001ovb; pdb_00001ovt; 
				pdb_00001qjm; pdb_00001ryo; pdb_00001ryx; pdb_00001sdx; pdb_00001sqy; pdb_00001suv; pdb_00001tfa; pdb_00001vfd; pdb_00001vfe; pdb_00002alu; pdb_00002ays; pdb_00002b65; 
				pdb_00002bjj; pdb_00002d3i; pdb_00002doj; pdb_00002dp8; pdb_00002dqv; pdb_00002ds9; pdb_00002dsf; pdb_00002dvc; pdb_00002dwa; pdb_00002dwh; pdb_00002dwi; pdb_00002dwj; 
				pdb_00002dxr; pdb_00002dxy; pdb_00002dyx; pdb_00002e0s; pdb_00002e1s; pdb_00002fa7; pdb_00002g93; pdb_00002h4i; pdb_00002hau; pdb_00002hav; pdb_00002hca; pdb_00002nuv; 
				pdb_00002nwj; pdb_00002o1l; pdb_00002o51; pdb_00002o7u; pdb_00002o84; pdb_00002ocu; pdb_00002p1s; pdb_00002pms; pdb_00002px1; pdb_00002q8j; pdb_00002qje; pdb_00002r71; 
				pdb_00002r9j; pdb_00002zmb; pdb_00003cfl; pdb_00003ci8; pdb_00003cr9; pdb_00003crb; pdb_00003e9x; pdb_00003fgs; pdb_00003iaz; pdb_00003ib0; pdb_00003ib1; pdb_00003ib2; 
				pdb_00003k0v; pdb_00003kj7; pdb_00003mc2; pdb_00003mjn; pdb_00003o97; pdb_00003qyt; pdb_00003rgy; pdb_00003s9l; pdb_00003s9m; pdb_00003s9n; pdb_00003sdf; pdb_00003skp; 
				pdb_00003taj; pdb_00003tod; pdb_00003ttr; pdb_00003tus; pdb_00003u72; pdb_00003u8q; pdb_00003ugw; pdb_00003uk4; pdb_00003usd; pdb_00003v5a; pdb_00003v83; pdb_00003v89; 
				pdb_00003v8x; pdb_00003vdf; pdb_00003ve1; pdb_00004dig; pdb_00004dxu; pdb_00004fim; pdb_00004fjp; pdb_00004for; pdb_00004g2z; pdb_00004g77; pdb_00004g8h; pdb_00004grk; 
				pdb_00004h0w; pdb_00004n6p; pdb_00004ned; pdb_00004oqo; pdb_00004x1b; pdb_00004x1d; pdb_00005cry; pdb_00005dyh; pdb_00005h52; pdb_00005hbc; pdb_00005wtd; pdb_00005x5p; 
				pdb_00005y6k; pdb_00006ctc; pdb_00006d03; pdb_00006d04; pdb_00006d05; pdb_00006jas; pdb_00006soy; pdb_00006soz; pdb_00006uj6; pdb_00006wb6; pdb_00006xr0; pdb_00007enu; 
				pdb_00007equ; pdb_00007ev0; pdb_00007evq; pdb_00007fdw; pdb_00007ffm; pdb_00007ffu; pdb_00007jrd; pdb_00007n88; pdb_00007q1l; pdb_00008brc; pdb_00008fei; pdb_00008x3h; 
				pdb_00009h49; pdb_00009h4v
			
			

			» more