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PROSITE entry PS00349


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PURL: https://purl.expasy.org/prosite/signature/PS00349

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General information about the entry

Entry name [info] CTF_NFI_1
Accession [info] PS00349
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-NOV-1990 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00361

Name and characterization of the entry

Description [info] CTF/NF-I DNA-binding domain signature.
Pattern [info] 
R-K-R-K-Y-F-K-K-H-E-K-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 18 in 18 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.74 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 18 sequences 

NFIA_CHICK  (P17923), NFIA_HUMAN  (Q12857), NFIA_MOUSE  (Q02780), 

NFIA_RAT(P09414), NFIB_BOVIN  (Q0VCL6), NFIB_CHICK  (P17924), 
NFIB_HUMAN  (O00712), NFIB_MESAU  (P13622), NFIB_MOUSE  (P97863), 
NFIC_CHICK  (P17926), NFIC_HUMAN  (P08651), NFIC_MOUSE  (P70255), 
NFIC_PIG(P21999), NFIL_PIG(P14057), NFIX_CHICK  (Q90932), 
NFIX_HUMAN  (Q14938), NFIX_MESAU  (P13623), NFIX_MOUSE  (P70257)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

NFI1_CAEEL  (Q5H9N3)


				
	

	

		PDB
[Detailed view]		
		
			2 PDB
			


			pdb_00007qqd; pdb_00007qqe