PROSITE entry PS00349

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General information about the entry

Entry name [info]	CTF_NFI_1
Accession [info]	PS00349
Entry type [info]	PATTERN
Date [info]	01-NOV-1990 CREATED; 01-NOV-1990 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00361

Name and characterization of the entry

Description [info]	CTF/NF-I DNA-binding domain signature.
Pattern [info]	R-K-R-K-Y-F-K-K-H-E-K-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	18 in 18 different sequences
Number of true positive hits	18 in 18 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	1
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	94.74 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

18 sequences

NFIA_CHICK  (P17923), NFIA_HUMAN  (Q12857), NFIA_MOUSE  (Q02780),

NFIA_RAT(P09414), NFIB_BOVIN  (Q0VCL6), NFIB_CHICK  (P17924), 
NFIB_HUMAN  (O00712), NFIB_MESAU  (P13622), NFIB_MOUSE  (P97863), 
NFIC_CHICK  (P17926), NFIC_HUMAN  (P08651), NFIC_MOUSE  (P70255), 
NFIC_PIG(P21999), NFIL_PIG(P14057), NFIX_CHICK  (Q90932), 
NFIX_HUMAN  (Q14938), NFIX_MESAU  (P13623), NFIX_MOUSE  (P70257)

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UniProtKB/Swiss-Prot
False negative sequences

1 sequence

NFI1_CAEEL  (Q5H9N3)

PDB
[Detailed view]

2 PDB

7QQD; 7QQE