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PROSITE entry PS00395


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General information about the entry

Entry name [info] ALANINE_RACEMASE
Accession [info] PS00395
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-FEB-2002 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00332

Name and characterization of the entry

Description [info] Alanine racemase pyridoxal-phosphate attachment site.
Pattern [info] 
[SACVLG]-[AIPTV]-x(0,1)-K-[ADGS]-[DEN]-[GA]-Y-G-[HACILN]-[GD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 331 in 331 different sequences
Number of true positive hits 331 in 331 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 44
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.27 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 331 sequences 

ALR1_AGRFC  (P58736), ALR1_BACSU  (P10725), ALR1_CALS4  (Q8RAK6), 

ALR1_CLOAB  (Q97LR2), ALR1_ECO57  (Q8X5V2), ALR1_ECOL6  (Q8FB20), 
ALR1_ECOLI  (P0A6B4), ALR1_OCEIH  (Q8ELR9), ALR1_PSEAE  (Q9HUN4), 
ALR1_RHILO  (Q98A05), ALR1_SALTI  (P0A1A4), ALR1_SALTY  (P0A1A3), 
ALR1_SCHPO  (O59828), ALR1_SHIBO  (P0A6B6), ALR1_SHIDY  (Q932V0), 
ALR1_SHIFL  (P0A6B5), ALR1_SHISO  (Q93HP9), ALR1_STAA8  (Q9ZAH5), 
ALR1_STAAC  (Q5HED1), ALR1_STAAM  (P63479), ALR1_STAAN  (P63480), 
ALR1_STAAR  (Q6GF03), ALR1_STAAS  (Q6G7N9), ALR1_STAAW  (P63481), 
ALR2_AGRFC  (P58737), ALR2_BACSU  (P94494), ALR2_CALS4  (Q8R860), 
ALR2_CLOAB  (Q97DY9), ALR2_ECO57  (Q8X4I9), ALR2_ECOL6  (P59237), 
ALR2_ECOLI  (P29012), ALR2_KLEAE  (O30746), ALR2_OCEIH  (Q8ELK1), 
ALR2_PSEAE  (Q9HTQ2), ALR2_RHIJ3  (Q9RAE7), ALR2_RHILO  (Q98F05), 
ALR2_SALTI  (Q8Z688), ALR2_SALTY  (P06191), ALR2_SCHPO  (Q9P5N3), 
ALR3_RHILO  (Q981H7), ALR3_SALTI  (Q8Z300), ALRX_PSEPU  (P17916), 
ALR_ACIBS   (B0VNF6), ALR_ACICJ   (A5G2H9), ALR_ACIET   (B9MAN2), 
ALR_ACIF2   (B7J911), ALR_ACIF5   (B5EP95), ALR_ACISJ   (A1W2F6), 
ALR_ACTSZ   (A6VP88), ALR_AERHH   (A0KH11), ALR_ALBFT   (Q221R3), 
ALR_ALIB4   (A8ESX7), ALR_ALISL   (B6ELK6), ALR_ALTMD   (B4S1A6), 
ALR_ANOFW   (B7GFP5), ALR_AQUAE   (O67687), ALR_AQUPY   (Q9RER4), 
ALR_AROAE   (Q5P3K0), ALR_AZOSB   (A1KCI5), ALR_BEUC1   (C5BZY7), 
ALR_BORA1   (Q2KXU7), ALR_BORBU   (O51182), ALR_BORBZ   (B7J192), 
ALR_BORPD   (A9IU63), ALR_BRUA2   (Q2YIU9), ALR_BRUC2   (A9MCK3), 
ALR_BRUME   (Q8YD03), ALR_BRUO2   (A5VVI9), ALR_BRUSI   (A9WVT5), 
ALR_BRUSU   (Q8FVC1), ALR_BURM7   (A3MKW5), ALR_BURM9   (A2SB51), 
ALR_BURMA   (Q62JA4), ALR_BURMS   (A1V591), ALR_CAMC1   (A7ZCL1), 
ALR_CAMC5   (A7GZM8), ALR_CAMJ8   (A8FLV4), ALR_CAMJD   (A7H3E3), 
ALR_CAMJE   (Q9PP26), ALR_CAMJJ   (A1VZN9), ALR_CAMJR   (Q5HUQ3), 
ALR_CARHZ   (Q9F8I0), ALR_CAUVC   (Q9A7Q9), ALR_CERS5   (A4WRF5), 
ALR_CHLTE   (Q8KB67), ALR_CHRSD   (Q1QU82), ALR_CITBB   (B5EBG2), 
ALR_CLOK5   (A5N376), ALR_CLONN   (A0PY95), ALR_CLOP1   (Q0TSS9), 
ALR_CLOPE   (Q8XM22), ALR_CLOPS   (Q0SUN0), ALR_CLOTE   (Q890X1), 
ALR_COPPD   (B5Y9T8), ALR_CUPMC   (Q1LNJ3), ALR_CUPNH   (Q0K9V9), 
ALR_CUPTR   (B3R2F9), ALR_CUTAK   (Q6A5H2), ALR_DEIDV   (C1CVP5), 
ALR_DEIGD   (Q1IYK9), ALR_DEIRA   (Q9RVE3), ALR_DELAS   (A9BR02), 
ALR_DESOH   (A8ZRV0), ALR_DESRM   (A4J8G6), ALR_DICNV   (A5EW54), 
ALR_DINSH   (A8LRT3), ALR_EDWI9   (C5BCC5), ALR_ERWT9   (B2VJ52), 
ALR_FRACC   (Q2JFD6), ALR_FUSNN   (Q8RGA2), ALR_GEOKA   (Q5L3G4), 
ALR_GEOMG   (Q39RJ8), ALR_GEOSE   (P10724), ALR_GEOSL   (Q74FK2), 
ALR_GEOSM   (C6E5Z6), ALR_HAEIN   (P45257), ALR_HAHCH   (Q2SLB1), 
ALR_HALH5   (Q9KFF9), ALR_HALHL   (A1WUS2), ALR_HALOH   (B8D0W1), 
ALR_HAMD5   (C4K4C4), ALR_HELP2   (B6JMG2), ALR_HELPG   (B5Z7U5), 
ALR_HELPH   (Q1CST1), ALR_HELPJ   (Q9ZKQ9), ALR_HELPY   (O25595), 
ALR_JANMA   (A6SY68), ALR_JANSC   (Q28RK6), ALR_LACAC   (Q5FMB2), 
ALR_LACCB   (B3WAR0), ALR_LACDA   (Q1GBP6), ALR_LACDB   (Q04C45), 
ALR_LACGA   (Q046E7), ALR_LACH4   (A8YXI3), ALR_LACLA   (Q9CH94), 
ALR_LACLM   (Q9RLU5), ALR_LACLS   (Q030B4), ALR_LACP3   (Q034T9), 
ALR_LACPL   (O08445), ALR_LARHH   (C1DBE8), ALR_LAWIP   (Q1MSD5), 
ALR_LEPCP   (B1Y2H6), ALR_LEPIC   (Q75FF2), ALR_LEPIN   (Q8EX97), 
ALR_LEVBA   (Q03T06), ALR_LIGS1   (Q1WV14), ALR_LIMF3   (B2GA65), 
ALR_LIMRD   (A5VI51), ALR_LIMRJ   (B2G5M9), ALR_LIMRT   (Q9FCV2), 
ALR_LISIN   (Q92DC9), ALR_LISM4   (G2K4Q7), ALR_LISMC   (C1L1F6), 
ALR_LISMF   (Q721S9), ALR_LISMH   (B8DG73), ALR_LISMO   (P0DJL8), 
ALR_LISW6   (A0AH04), ALR_MACCJ   (B9E8C3), ALR_MANSM   (Q65TC1), 
ALR_MARMS   (A6W1F2), ALR_MARN8   (A1U388), ALR_METCA   (Q607M5), 
ALR_METFK   (Q1H1N8), ALR_METI4   (B3DWZ0), ALR_METMP   (Q6LX41), 
ALR_METNO   (B8IEC7), ALR_MYCA1   (A0QKR9), ALR_MYCAV   (Q9L888), 
ALR_MYCBO   (P0A4X3), ALR_MYCLE   (P38056), ALR_MYCS2   (A0QSR6), 
ALR_MYCSM   (P94967), ALR_MYCTO   (P9WQA8), ALR_MYCTU   (P9WQA9), 
ALR_MYCUA   (A0PME2), ALR_MYCVP   (A1T566), ALR_NEIG1   (Q5F788), 
ALR_NEIMA   (Q9JTA6), ALR_NEIMB   (Q9JYC4), ALR_NEIMF   (A1KV59), 
ALR_NITEC   (Q0AFV7), ALR_NITEU   (Q82UR4), ALR_NITMU   (Q2Y763), 
ALR_NITOC   (Q3JEJ2), ALR_NITSB   (A6Q1W0), ALR_NITV2   (Q72DH4), 
ALR_NITV4   (A1VF31), ALR_NITV9   (B8DRL1), ALR_NOSS1   (Q8YU96), 
ALR_PARC0   (A1TIS2), ALR_PARPJ   (B2T5L6), ALR_PASMU   (Q9CNL5), 
ALR_PECAS   (Q3V7N2), ALR_PECCP   (C6DE79), ALR_PEDPA   (Q03DZ2), 
ALR_PELTS   (A5D4I1), ALR_PERPY   (Q9S5V6), ALR_PHOPR   (Q3V7I5), 
ALR_POLNA   (A1VIH8), ALR_POLSJ   (Q12H34), ALR_PROMA   (Q7V9Z2), 
ALR_PSE14   (Q48PY9), ALR_PSEA6   (Q15NL4), ALR_PSEE4   (Q1I2V7), 
ALR_PSEF5   (Q4K3T9), ALR_PSETA   (B9WZ64), ALR_PSEU2   (Q4ZZW2), 
ALR_RALN1   (Q8XZM4), ALR_RALPJ   (B2UAX2), ALR_RHIME   (Q92R07), 
ALR_RHORT   (Q2RXD1), ALR_RICAE   (C3PMD1), ALR_RICAH   (A8GM54), 
ALR_RICCK   (A8EXF8), ALR_RICCN   (Q92JD9), ALR_RICFE   (Q4UNC8), 
ALR_RICPR   (Q9ZE52), ALR_RICPU   (C4K1B0), ALR_RICRO   (B0BW55), 
ALR_RICRS   (A8GQR1), ALR_RICTY   (Q68XW3), ALR_ROSDO   (Q163V1), 
ALR_SALAI   (A8M4B3), ALR_SALTO   (A4XBI0), ALR_SHEAM   (A1SA53), 
ALR_SHEB2   (B8E9P2), ALR_SHEB5   (A3D8P9), ALR_SHEB8   (A6WJ85), 
ALR_SHEB9   (A9L126), ALR_SHEDO   (Q12RW2), ALR_SHEFN   (Q07XT3), 
ALR_SHELP   (A3QI45), ALR_SHEON   (Q8EAI6), ALR_SHEPA   (A8H8K6), 
ALR_SHEPC   (A4Y3F6), ALR_SHEPW   (B8CIQ9), ALR_SHESA   (A0KT33), 
ALR_SHESH   (A8FRA1), ALR_SHESM   (Q0HF52), ALR_SHESR   (Q0HYW0), 
ALR_SHESW   (A1RNI3), ALR_SHEWM   (B1KHY4), ALR_SHIB3   (B2TX62), 
ALR_SHIBS   (Q31TW1), ALR_SHIDS   (Q327W0), ALR_SODGM   (Q2NTA8), 
ALR_SORC5   (A9ESU7), ALR_STAA3   (Q2FF55), ALR_STAAE   (A6QIR5), 
ALR_STAEQ   (Q5HME5), ALR_STAES   (Q8CNK7), ALR_STAS1   (Q49Z24), 
ALR_STRA1   (Q3JZK5), ALR_STRA3   (Q8E3M9), ALR_STRA5   (Q8DY10), 
ALR_STRCO   (O86786), ALR_STRE4   (C0M6I5), ALR_STREM   (B4U178), 
ALR_STRGC   (A8AVC4), ALR_STRMU   (Q8DSF4), ALR_STRP1   (Q99Y98), 
ALR_STRP2   (Q04J74), ALR_STRP3   (P0CZ56), ALR_STRP4   (B5E745), 
ALR_STRP6   (Q5XAA4), ALR_STRP7   (C1C8T6), ALR_STRP8   (Q8NZK4), 
ALR_STRPB   (Q1JA50), ALR_STRPC   (Q1JKA0), ALR_STRPD   (Q1JF94), 
ALR_STRPF   (Q1J545), ALR_STRPG   (A2RCT3), ALR_STRPI   (B1I755), 
ALR_STRPJ   (B8ZMG1), ALR_STRPM   (Q48RM8), ALR_STRPN   (P0A2W8), 
ALR_STRPQ   (P0CZ57), ALR_STRPZ   (B5XI21), ALR_STRR6   (P0A2W9), 
ALR_STRS2   (A4W3N5), ALR_STRS7   (C0MEB7), ALR_STRSY   (A4VXD9), 
ALR_STRT1   (Q5LY71), ALR_STRT2   (Q5M2S7), ALR_STRTD   (Q03IX8), 
ALR_STRU0   (B9DVI3), ALR_STRZJ   (C1CFR7), ALR_STRZP   (C1CM34), 
ALR_STRZT   (C1CSV9), ALR_STUS1   (A4VQM5), ALR_SYMTH   (Q67K79), 
ALR_SYNFM   (A0LFQ9), ALR_SYNY3   (P54918), ALR_THEFY   (Q47LN3), 
ALR_THEYD   (B5YIM9), ALR_THIDA   (Q3SH36), ALR_THISH   (B8GNS7), 
ALR_TREDE   (Q73NQ7), ALR_TREPA   (Q56346), ALR_TREPS   (B2S3S0), 
ALR_VARPS   (C5CX88), ALR_VEREI   (A1WQY3), ALR_VIBA3   (B7VI70), 
ALR_VIBCH   (Q9KUY6), ALR_VIBPA   (Q87L78), ALR_VIBVU   (Q8DCL0), 
ALR_VIBVY   (Q7MH94), ALR_XANAC   (Q8PGD0), ALR_XANC8   (Q4UQB5), 
ALR_XANCP   (Q8P4R0), ALR_XANE5   (Q3BNX4), ALR_XANOM   (Q2P7U1), 
ALR_XANOR   (Q5H522), ALR_XYLFA   (Q9PF26), ALR_XYLFT   (Q87AK1), 
ALR_YERPE   (Q8ZJ10), ALR_YERPG   (A9QYT2), BSR_AERHH   (A0KLG5), 
BSR_PSEPK   (Q88GJ9), BSR_PSEPU   (I6LNY0), BSR_PSETA   (I0J1I6), 
BSR_VIBCH   (Q9KSE5), BSR_VIBPA   (Q87HG4), BSR_VIBVU   (Q8D6Q0), 
BSR_YERPE   (Q8ZFL4), DADX_PSEPK  (Q88CB2), LYR_PROMI   (M4GGR9), 
LYSR_OENOB  (Q04HB7), VANTE_ENTFL (Q93A44), VANTG_ENTFL (Q9KHL7), 
VANT_ENTGA  (Q9X3P3)
» more

UniProtKB/Swiss-Prot
False negative sequences		 44 sequences 

ALR2_STAA8  (Q9EZ08), ALR2_STAAC  (Q5HG21), ALR2_STAAM  (P63482), 

ALR2_STAAN  (P63483), ALR_ACTP2   (A3MYX4), ALR_ALCBS   (Q0VMG4), 
ALR_CERS1   (A3PIR7), ALR_CERS4   (Q3J3L4), ALR_CERSK   (B9KQC8), 
ALR_COREF   (Q8FS13), ALR_CORGB   (A4QBT0), ALR_CORGL   (Q8RSU9), 
ALR_COXB1   (B6J6U2), ALR_COXB2   (B6J0J1), ALR_COXBN   (A9KFM0), 
ALR_COXBR   (A9ND48), ALR_COXBU   (Q83D71), ALR_DESDA   (B8J2K3), 
ALR_FRAP2   (B0TYB0), ALR_FRAT1   (Q14IP6), ALR_FRATF   (A7ND36), 
ALR_FRATH   (Q2A2P9), ALR_FRATM   (B2SHB9), ALR_FRATN   (A0Q5X2), 
ALR_FRATO   (Q0BL88), ALR_FRATT   (Q5NH94), ALR_FRATW   (A4IZ25), 
ALR_HAEDU   (Q7VNC9), ALR_HELAH   (Q17WC4), ALR_HELPS   (B2UU89), 
ALR_LATSS   (Q38V64), ALR_LEGPA   (Q5X709), ALR_LEGPC   (A5IGG9), 
ALR_LEGPH   (Q5ZXJ2), ALR_LEGPL   (Q5WYG1), ALR_METPP   (A2SLS6), 
ALR_METS4   (B0UL34), ALR_PSYWF   (A5WDJ3), ALR_RICBR   (Q1RGU4), 
ALR_RUEST   (Q1GFQ4), ALR_STACT   (B9DMI9), ALR_SULNB   (A6QC54), 
ALR_VESOH   (A5CWE3), ALR_WIGBR   (Q8D2H8)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

ALR_PISSA   (Q9F9L1), ALR_PSEFL   (P33162)


				
	

	

		PDB
[Detailed view]		
		
			47 PDB
			


			1BD0; 1EPV; 1FTX; 1L6F; 1L6G; 1NIU; 1RCQ; 1SFT; 1XFC; 1XQK; 1XQL; 2RJG; 
			
				2RJH; 2SFP; 3B8T; 3B8U; 3B8V; 3B8W; 3CO8; 3OO2; 3S46; 4A3Q; 4BEQ; 4BEU; 
				4BF5; 4BHY; 4DYJ; 4DZA; 4FS9; 4WR3; 4XBJ; 4Y2W; 5FAC; 5FAG; 5FAJ; 5IRP; 
				6A2F; 6G56; 6G58; 6G59; 6Q70; 6Q71; 6Q72; 6SCZ; 7AGZ; 8AHW; 8B8H
			
			

			» more