PROSITE entry PS00444

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PURL: https://purl.expasy.org/prosite/signature/PS00444

Direct ScanProsite submission

General information about the entry

Entry name [info]	POLYPRENYL_SYNTHASE_2
Accession [info]	PS00444
Entry type [info]	PATTERN
Date [info]	01-MAY-1991 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00407

Name and characterization of the entry

Description [info]	Polyprenyl synthases signature 2.
Pattern [info]	[LIVMFY]-G-x(2)-[FYL]-Q-[LIVM]-x-D-D-[LIVMFY]-x-[DNG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2026_02 which contains 575'503 sequence entries.

Total number of hits	180 in 180 different sequences
Number of true positive hits	180 in 180 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	12
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	93.75 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

180 sequences

ABVS_ASPBC  (A0A1L9UKS1), AMBP2_FISAU (V5TF61), AMYG_DIAAM  (W6JPP9),

ASTC_TALWO  (A0A3Q9FFM1), ATMG_ASPFL  (Q672V6), AUAS_ASPUT  (P9WEP0), 
BSC8_ALTBR  (C9K2Q3), BTCA_COLOR  (N4V6D4), BTCA_NEOBT  (A0A2Z6FZ31), 
CGDS_COLGL  (P9WEV7), CLE6_ASPVE  (A0A3S5XFG0), COQ1_NEUCR  (Q7S565), 
COQ1_YARLI  (Q6CBH3), COQ1_YEAST  (P18900), CRTE_CERS4  (P54976), 
CRTE_CYAPA  (P48368), CRTE_PANAN  (P21684), CRTE_PICP2  (B1XJV9), 
CRTE_PSEVU  (P22873), CRTE_RHOCB  (P17060), DPASD_APISA (P9WEX3), 
DPCHD_COLHI (H1VQB1), DPFGD_GIBZE (I1RL14), DPMAD_METAN (P9WEX9), 
DPMPD_MACPH (P9WEW8), DPS1_DICDI  (Q54VJ9), DPS1_HUMAN  (Q5T2R2), 
DPS1_MOUSE  (Q33DR2), DPS1_SCHPO  (O43091), ERG20_ASPFU (Q4WEB8), 
ERG20_CANAL (A0A1D8PH78), ERG20_GANLU (B4YA15), ERG20_GIBZE (V6RG22), 
ERG20_SCHPO (O14230), ERG20_YEAST (P08524), ERIE_HERER  (A0A1V0QSA8), 
ESDPD_PENSH (A0A8D5M3Y5), EVVS_EMEVA  (A0A0P0ZD79), FC1_DIAAM   (A2PZA5), 
FOFS_FUSOX  (P9WER6), FPPS1_ARATH (Q09152), FPPS1_ARTSI (Q7XYS9), 
FPPS1_CANSA (A0A7J6HWR9), FPPS1_LUPAL (P49351), FPPS1_PARAR (O24241), 
FPPS2_ARATH (Q43315), FPPS2_ARTSI (Q7XYT0), FPPS2_CANSA (A0A1V0QSH7), 
FPPS2_LUPAL (P49352), FPPS2_PARAR (O24242), FPPS_ARTAN  (P49350), 
FPPS_BOVIN  (Q8WMY2), FPPS_CHICK  (P08836), FPPS_FUSFU  (Q92235), 
FPPS_HELAN  (O64905), FPPS_HUMAN  (P14324), FPPS_KLULA  (P49349), 
FPPS_MAIZE  (P49353), FPPS_MOUSE  (Q920E5), FPPS_MURHI  (A0A343W970), 
FPPS_MYCBO  (P0A5H9), FPPS_MYCTO  (P9WKH0), FPPS_MYCTU  (P9WKH1), 
FPPS_NEUCR  (Q92250), FPPS_NEZVI  (A0A386JVA3), FPPS_RAT(P05369), 
FPS_DICDI   (Q9NH03), FPS_PANGI   (Q4JHN6), FUP1_FUSPR  (A0A1L7VFX3), 
GA5_GIBF5   (S0E627), GFPPS_MYCTU (O53507), GFPS_NATPD  (Q3IPL1), 
GGDPS_MELLI (A0A858E6N7), GGDPS_MELLP (A0A858E7G0), GGPP1_ARATH (P34802), 
GGPP2_ARATH (O04046), GGPP3_ARATH (Q9LUD9), GGPP4_ARATH (Q9SLG2), 
GGPP6_ARATH (O22043), GGPP7_ARATH (Q9ZU77), GGPP8_ARATH (Q9LRR0), 
GGPP9_ARATH (Q9LUE1), GGPPA_ARATH (Q9LJY2), GGPPB_ARATH (Q9LIA0), 
GGPPC_ARATH (Q9LHR4), GGPPS_BOVIN (P56966), GGPPS_CAPAN (P80042), 
GGPPS_CATRO (Q42698), GGPPS_DICDI (Q54BK1), GGPPS_EREGS (Q758K0), 
GGPPS_FUSFU (Q92236), GGPPS_HEVBR (Q94ID7), GGPPS_HUMAN (O95749), 
GGPPS_MOUSE (Q9WTN0), GGPPS_MUCCL (Q9P885), GGPPS_NEUCR (P24322), 
GGPPS_RAT   (Q6F596), GGPPS_SCHPO (O59703), GGPPS_SINAL (Q43133), 
GGPPS_YEAST (Q12051), GGPP_METMA  (Q8PW34), GGPS_SACS2  (P95999), 
GGPS_SULAC  (P39464), GGS1_DIAAM  (B2DBE8), GGS1_HYPPI  (A0A2I6PJ05), 
GGS2_ZYMTI  (F9WWF1), GGS3_ZYMTI  (F9XLC1), GGS4_DIAAM  (B2DBE9), 
GGS_NEOBT   (Q6F5E6), GSS1_ZYMTI  (F9WZD2), HEPS2_BACSU (P31114), 
HEPS2_GEOSE (P55785), HEXB_MICLU  (O66129), HEXPP_SACS2 (Q97W92), 
IDSA_METJA  (Q58270), IDSA_METTH  (O26156), IDSA_METTM  (Q53479), 
IDTG_CLAPA  (J7FIX8), ISPA_AQUAE  (O66952), ISPA_BACSU  (P54383), 
ISPA_BRADU  (Q45220), ISPA_BUCAI  (P57537), ISPA_BUCAP  (Q8K9A0), 
ISPA_ECOLI  (P22939), ISPA_GEOSE  (Q08291), ISPA_HAEIN  (P45204), 
ISPA_MICLU  (O66126), ISPA_SINFN  (P55539), ISPB_ECOLI  (P0AD57), 
ISPB_HAEIN  (P44916), ISPB_SHIFL  (P0AD58), JANG_PENJA  (A0A0E3D8M9), 
LTMG_EPIFF  (Q56RZ3), LTMG_EPIFI  (Q56RZ7), NFSS_ASPF1  (A1DN30), 
NPPPS_MYCTU (O06428), OBLA_ASPCI  (A0A0U5G0B1), OBLA_ASPCL  (A1C8C3), 
OBLA_COCH5  (M2V8C1), OBLA_EMEVA  (A0A1V1FVQ6), OLCC_PENCN  (P9WEQ2), 
PAPS_DIAAM  (P9WEV6), PAXG_PENPX  (Q9C446), PBCB_EMENI  (A0A1U8QLG8), 
PCCS_PENCH  (A0A348DU52), PCHDS_PENRW (B6HFX8), PENG_PENCR  (A0A0E3D8P4), 
PLE4_CLIPA  (A0A2L0VXR5), PLE4_CLIPS  (A0A6S6QJ62), PRDS_PENRF  (W6QAE7), 
PREA_CYACA  (Q9TLS1), PREA_CYAPA  (P31171), PREA_PORPU  (P51268), 
PREA_PYRYE  (Q1XDL8), PREA_SYNY3  (P72580), PTMG_PENOH  (A0A140JWS2), 
PVCPS_TALVE (A0A348FUE1), PVPS_TALVE  (A0A2Z6AQX6), QNN1_EMEVA  (A0A1Y1C7Q5), 
SDNC_SORAA  (A0A1B4XBK0), SDSA_RHOCA  (O24743), SPS1_ARATH  (Q8S948), 
SPS1_ORYSJ  (Q653T6), SPS2_ARATH  (Q76FS5), SPS2_ORYSJ  (Q75HZ9), 
SPS3_ARATH  (Q5HZ00), SPS3_ORYSJ  (Q0INZ4), SPYE_ASPFU  (Q4WBI4), 
SUBD_METRA  (E9F5E9), TPCA_COCH5  (M2U578), TPRT_ASFB7  (Q65164), 
TPRT_ASFK5  (P0C9E2), TPRT_ASFM2  (Q8V9T7), TPRT_ASFP4  (P0C9E0), 
TPRT_ASFWA  (P0C9E1), TPS_MATON   (A0A7D0AGU9), TVTS_TALVE  (P9WER5), 
VNIC_VIRNI  (P9WEF2), VRTD_PENAE  (D7PHZ5), Y8823_DICDI (Q54XP1)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

12 sequences

COMQ_BACIU  (P0DV08), COMQ_BACNB  (D4G0R4), COMQ_BACSC  (P0DV09),

COMQ_BACSU  (P33690), DLP1_HUMAN  (Q86YH6), DLP1_MOUSE  (Q33DR3), 
DLP1_RAT(Q5U2R1), DLP1_SCHPO  (O13851), GGPPS_GEOAI (A0A0A7GEY4), 
GGPPS_MYCTU (O50410), GPPS_IPSPI  (Q58GE8), GPPS_MYCTU  (O05572)

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PDB
[Detailed view]

174 PDB

pdb_00001fps; pdb_00001rqi; pdb_00001rqj; pdb_00001ubv; pdb_00001ubw; pdb_00001ubx; pdb_00001uby; pdb_00001yq7; pdb_00001yv5; pdb_00001zw5; pdb_00002azj; pdb_00002azk; pdb_00002dh4; pdb_00002e8t; pdb_00002e8u; pdb_00002e8v; pdb_00002e8w; pdb_00002e8x; pdb_00002e90; pdb_00002e91; pdb_00002e92; pdb_00002e93; pdb_00002e94; pdb_00002e95; pdb_00002f7m; pdb_00002f89; pdb_00002f8c; pdb_00002f8z; pdb_00002f92; pdb_00002f94; pdb_00002f9k; pdb_00002j1o; pdb_00002j1p; pdb_00002opm; pdb_00002opn; pdb_00002q80; pdb_00002qis; pdb_00002rah; pdb_00002vf6; pdb_00002z4v; pdb_00002z4w; pdb_00002z4x; pdb_00002z4y; pdb_00002z4z; pdb_00002z50; pdb_00002z52; pdb_00002z78; pdb_00002z7h; pdb_00002z7i; pdb_00002zeu; pdb_00002zev; pdb_00003apz; pdb_00003aq0; pdb_00003aqb; pdb_00003aqc; pdb_00003b7l; pdb_00003cp6; pdb_00003n1v; pdb_00003n1w; pdb_00003n3l; pdb_00003n45; pdb_00003n46; pdb_00003n49; pdb_00003n5h; pdb_00003n5j; pdb_00003n6k; pdb_00003rye; pdb_00003s4j; pdb_00004dem; pdb_00004ga3; pdb_00004h5c; pdb_00004h5d; pdb_00004h5e; pdb_00004jvj; pdb_00004kfa; pdb_00004kk2; pdb_00004kpd; pdb_00004kpj; pdb_00004kq5; pdb_00004kqs; pdb_00004kqu; pdb_00004l2x; pdb_00004lfv; pdb_00004lpg; pdb_00004lph; pdb_00004n1z; pdb_00004n9u; pdb_00004nfi; pdb_00004nfj; pdb_00004nfk; pdb_00004ng6; pdb_00004p0v; pdb_00004p0w; pdb_00004p0x; pdb_00004pvx; pdb_00004pvy; pdb_00004q23; pdb_00004qpf; pdb_00004qxs; pdb_00004rxa; pdb_00004xqr; pdb_00004xqs; pdb_00004xqt; pdb_00005ayp; pdb_00005cg5; pdb_00005cg6; pdb_00005dgm; pdb_00005dgn; pdb_00005dgs; pdb_00005diq; pdb_00005djp; pdb_00005djr; pdb_00005djv; pdb_00005e8h; pdb_00005e8k; pdb_00005e8l; pdb_00005ern; pdb_00005ero; pdb_00005ja0; pdb_00005juz; pdb_00005jv0; pdb_00005jv1; pdb_00005jv2; pdb_00005ksx; pdb_00005ygi; pdb_00005ze6; pdb_00005zlf; pdb_00006c56; pdb_00006c57; pdb_00006n7y; pdb_00006n7z; pdb_00006n82; pdb_00006n83; pdb_00006oag; pdb_00006oah; pdb_00006r4v; pdb_00006sxl; pdb_00006sxn; pdb_00006v0k; pdb_00007jth; pdb_00007s09; pdb_00007s0a; pdb_00007s0h; pdb_00007s0l; pdb_00007s0m; pdb_00008eax; pdb_00008f8f; pdb_00008f8k; pdb_00008f8l; pdb_00008hdl; pdb_00009b3t; pdb_00009csl; pdb_00009cy2; pdb_00009cyz; pdb_00009cz4; pdb_00009cz5; pdb_00009e2h; pdb_00009e2i; pdb_00009e2j; pdb_00009e2k; pdb_00009e2l; pdb_00009e2m; pdb_00009hjs; pdb_00009hjz; pdb_00009imq; pdb_00009imr; pdb_00009jqs; pdb_00009jr6; pdb_00009jzf; pdb_00009kbk; pdb_00009kp1; pdb_00009kuq; pdb_00009q3i; pdb_00009vxi
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