PROSITE entry PS00562
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PURL: https://purl.expasy.org/prosite/signature/PS00562
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CBM1_1 |
| Accession [info] | PS00562 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00486 |
Name and characterization of the entry
| Description [info] | CBM1 (carbohydrate binding type-1) domain signature. |
| Pattern [info] |
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C. |
Numerical results [info]
| Total number of hits | 131 in 127 different sequences |
| Number of true positive hits | 131 in 127 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.24 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 7 |
| Site [info] | disulfide at position 9 |
| Site [info] | disulfide at position 16 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
127 sequences
AA12_COPC7 (A8P0V4), AA12_COPCI (A0A0A8IDB7), AB62A_PENPR (A0A977JPB5), AXE1_ASPF1 (A1DBP9), AXE1_ASPFU (Q4WBW4), AXE1_COPC7 (A8PB24), AXE1_TALPU (Q8NJP6), AXE1_TRIRF (Q99034), CBHB_ASPAC (O59843), CBHB_ASPCL (A1CU44), CBHB_ASPF1 (A1DNL0), CBHB_ASPFC (B0Y8K2), CBHB_ASPFU (Q4WM08), CBHB_ASPNC (A2QAI7), CBHB_ASPNG (Q9UVS8), CBHB_ASPTN (Q0CMT2), CBHB_EMENI (Q8NK02), CBHC_ASPCL (A1CCN4), CBHC_ASPF1 (A1DJQ7), CBHC_ASPFC (B0XWL3), CBHC_ASPFU (Q4WFK4), CBHC_ASPNC (A2QYR9), CBHC_ASPTN (Q0CFP1), CBHC_EMENI (Q5B2E8), CE12C_PYRO7 (G4NBX2), CEL6A_PODAN (B2ABX7), CEL6A_PYRO7 (G4MM92), CEL7A_THET4 (G2QCS4), CUTI1_VERDV (A0A2J8C362), EG3_VERDV (G2XAS5), EG5A_PHACH (Q66NB7), EIX1_BOTFB (A0A384JXV5), EIX3_VERDV (G2X8M4), EIX3_VERLO (A0A0G4KL96), EIX_DREDA (A0AAD6J2M3), FAEB_TALFU (Q9HE18), FAEB_TALSN (B8M9H9), GCE1_PHACR (P0CT87), GCE1_PODAN (B2ABS0), GCE1_SODAL (A0A1D8EJG8), GCE_CERUI (A0A0A7EQR3), GCE_TRIR6 (G0RV93), GH6D_PODAN (B2ADA5), GH72_VERDV (G2WQW0), GH75_VERDV (G2WUV0), GH76_VERDV (G2WZP1), GUN1_TRILO (Q12714), GUN1_TRIR3 (A0A024SNB7), GUN1_TRIRF (P07981), GUN2_TRIR3 (A0A024SH20), GUN2_TRIRF (P07982), GUN3_HUMIN (Q12624), GUN3_NEUCR (Q7SDR1), GUN5_TRIRF (P43317), GUNB_FUSOX (P46236), GUNF_FUSOX (P46239), GUNK_FUSOX (P45699), GUX1A_NEUCR (Q7SA23), GUX1B_NEUCR (P38676), GUX1_HUMIN (P15828), GUX1_HYPRU (P19355), GUX1_PENJA (Q06886), GUX1_PHACH (P13860), GUX1_TRIHA (Q9P8P3), GUX1_TRIKO (P62695), GUX1_TRIR3 (A0A024RXP8), GUX1_TRIRF (P62694), GUX2_AGABI (Q92400), GUX2_TRIR3 (A0A024SH76), GUX2_TRIRF (P07987), GUX3_AGABI (P49075), GUX6_HUMIN (Q9C1S9), GUXC_FUSOX (P46238), LP9A_ASPCL (A1C4H2), LP9A_ASPF1 (A1DBS6), LP9A_ASPFC (B0Y9G4), LP9A_ASPFN (B8MXJ7), LP9A_ASPKW (Q96WQ9), LP9A_ASPNC (A2R5N0), LP9A_ASPOR (Q2US83), LP9A_ASPTM (A0A5N6V703), LP9A_ASPTN (Q0CEU4), LP9A_BOTFB (A0A384K4U6), LP9A_NEUCR (Q7S439), LP9A_PODAN (B2B629), LP9A_TRIR6 (G0R6T8), LP9A_TRIRF (O14405), LP9B_EMENI (Q5BCX8), LP9B_PODAN (B2AVF1), LP9C_ASPFU (Q4WBU0), LP9C_BOTFB (A0A384JJB6), LP9C_NEUCR (Q7SHI8), LP9E_EMENI (Q5AQA6), LP9E_PODAN (B2ATL7), LP9G_ASPTM (A0A5N6UV50), LP9G_THETT (G2QZK6), LP9H_THET4 (G2Q9T3), LP9_AGABI (Q00023), LP9_COPC7 (A8NCG7), LPM91_DREDA (A0AAD6J5F2), MANA_TRIR3 (Q99036), MANF_ASPF1 (A1DBV1), MANF_ASPFC (B0Y9E7), MANF_ASPFN (B8NIV9), MANF_ASPFU (Q4WBS1), MANF_ASPOR (Q2U2I3), MANF_EMENI (Q5AR04), PSBP_PORPU (P50272), XG74_TRIR6 (Q7Z9M8), XY11B_HUMIN (A0A0B5JC15), XYN1A_HUMIN (P79046), XYN1_PENPR (A0A2U7QU15), XYN6_PYRGI (Q8NJ73), XYN6_PYRO7 (G4MPQ7), XYNA_PHACH (Q9HEZ1), XYNA_TALFU (Q8WZJ4), XYNB_NEOPA (Q02290), XYNB_PENOX (E7EF85), XYNB_PHACH (B7SIW1), XYNB_TALFU (Q8J0K5), XYNC_HUMIN (M4MEY9), XYNC_NEOPA (Q9UV68), XYNC_PHACH (B7SIW2), XYND_GIBZE (I1S3C6), XYND_TALFU (Q5ZNB1), XYS20_NEOPA (A8TGA1), YKK5_SCHPO (Q9P7F1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
MANF_ASPCL (A1C8U0) |
| PDB [Detailed view] |
20 PDB
pdb_00001az6; pdb_00001azh; pdb_00001azk; pdb_00001cbh; pdb_00002cbh; pdb_00002mwj; pdb_00002mwk; pdb_00004bmf; pdb_00005x34; pdb_00005x35; pdb_00005x36; pdb_00005x37; pdb_00005x38; pdb_00005x39; pdb_00005x3c; pdb_00006rv8; pdb_00007yhf; pdb_00007yhg; pdb_00007yhh; pdb_00007yhi » more |