PROSITE entry PS00752
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PURL: https://purl.expasy.org/prosite/signature/PS00752
Direct ScanProsite submission
General information about the entry
| Entry name [info] | XPA_1 |
| Accession [info] | PS00752 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-1992 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00611 |
Name and characterization of the entry
| Description [info] | XPA protein signature 1. |
| Pattern [info] |
C-x-[DE]-C-x(3)-[LIVMF]-x(1,2)-D-x(2)-L-x(3)-F-x(4)-C-x(2)-C. |
Numerical results [info]
| Total number of hits | 6 in 6 different sequences |
| Number of true positive hits | 6 in 6 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 2 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 75.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | zinc(?) at position 1 |
| Site [info] | zinc(?) at position 4 |
| Site [info] | zinc(?) at position 14 |
| Site [info] | zinc(?) at position 16 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
6 sequences
RAD14_YEAST (P28519), XPA_CHICK (P27089), XPA_DROME (P28518), XPA_HUMAN (P23025), XPA_MOUSE (Q64267), XPA_XENLA (P27088)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
2 sequences
RAD14_CANAL (P53709), RAD14_SCHPO (O59753) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
XPA_CRIGR (Q64029) |
| PDB [Detailed view] |
18 PDB
pdb_00001d4u; pdb_00001xpa; pdb_00005a39; pdb_00005a3d; pdb_00005g32; pdb_00005g33; pdb_00005g34; pdb_00005g35; pdb_00005lcl; pdb_00005lcm; pdb_00006j44; pdb_00006lae; pdb_00006ro4; pdb_00007ad8; pdb_00008ebt; pdb_00008ebu; pdb_00008ebx; pdb_00008eby » more |