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PROSITE entry PS00922
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Direct ScanProsite submission
General information about the entry
| Entry name [info] | TRANSGLYCOSYLASE |
| Accession [info] | PS00922 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00713 |
| Associated ProRule [info] | PRU10071 |
Name and characterization of the entry
| Description [info] | Prokaryotic transglycosylases signature. |
| Pattern [info] |
[LIVM]-x(3)-E-S-x(3)-[AP]-x(3)-S-x(5)-G-[LIVM]-[LIVMFYW]-x-[LIVMFYW]- x(4)-[SAG]. |
Numerical results [info]
| Total number of hits | 209 in 209 different sequences |
| Number of true positive hits | 209 in 209 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 27 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 88.56 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 3 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
209 sequences
CWLQ_BACSU (O31608), EMTAL_SHIFL (Q83RQ0), EMTA_CITK8 (A8AFS5), EMTA_CROS8 (A7MKC3), EMTA_ECO27 (B7UQ77), EMTA_ECO45 (B7MK90), EMTA_ECO55 (B7LGV3), EMTA_ECO57 (Q8XDJ7), EMTA_ECO5E (B5YXL7), EMTA_ECO7I (B7NUV4), EMTA_ECO81 (B7MTX1), EMTA_ECO8A (B7LXA7), EMTA_ECOBW (C4ZTN4), EMTA_ECODH (B1XAN4), EMTA_ECOK1 (A1AAB6), EMTA_ECOL5 (Q0TII2), EMTA_ECOL6 (P59243), EMTA_ECOLC (B1IU99), EMTA_ECOLI (P0C960), EMTA_ECOLU (B7N3Z9), EMTA_ECOSM (B1LHX3), EMTA_ECOUT (Q1RCQ2), EMTA_ENT38 (A4WBE8), EMTA_ESCF3 (B7LSJ1), EMTA_KLEP3 (B5XQ85), EMTA_KLEP7 (A6TAW0), EMTA_SALCH (Q57NL3), EMTA_SALEP (B5R2X1), EMTA_SALG2 (B5R901), EMTA_SALPA (Q5PN08), EMTA_SALPB (A9MVX1), EMTA_SALPC (C0Q334), EMTA_SALPK (B5BI54), EMTA_SALTI (Q8XGT6), EMTA_SALTY (Q7CQE4), EMTA_SHIBS (Q31ZN3), EMTA_SHIDS (Q32H22), EMTA_SHIF8 (Q0T5K7), EMTA_SHIFL (Q83RP9), EMTA_SHISS (Q3Z2V5), EXLYS_BPPRD (P27380), EXLYS_BPT7 (P03726), MLTC_ACTP2 (A3N339), MLTC_ACTP7 (B3GYW8), MLTC_ACTPJ (B0BSH0), MLTC_ACTSZ (A6VLS0), MLTC_CITK8 (A8API2), MLTC_CROS8 (A7MLX9), MLTC_ECO24 (A7ZR89), MLTC_ECO27 (B7UI10), MLTC_ECO45 (B7MN10), MLTC_ECO55 (B7LFM1), MLTC_ECO57 (Q8XCS6), MLTC_ECO5E (B5YQG2), MLTC_ECO7I (B7NI32), MLTC_ECO81 (B7MZB8), MLTC_ECO8A (B7LYZ3), MLTC_ECOBW (C5A0N2), MLTC_ECODH (B1XFC3), MLTC_ECOHS (A8A4A6), MLTC_ECOK1 (A1AFE9), MLTC_ECOL5 (Q0TDN8), MLTC_ECOL6 (P0C067), MLTC_ECOLC (B1ISK6), MLTC_ECOLI (P0C066), MLTC_ECOLU (B7N7L9), MLTC_ECOSE (B6I7A0), MLTC_ECOSM (B1LDH3), MLTC_ECOUT (Q1R762), MLTC_EDWI9 (C5BCE9), MLTC_ENT38 (A4WEA0), MLTC_ESCF3 (B7LPT3), MLTC_GLAP5 (B8F6F0), MLTC_HAEDU (Q7VKB7), MLTC_HAEI8 (Q4QMD8), MLTC_HAEIE (A5UDW4), MLTC_HAEIG (A5UHR5), MLTC_HAEIN (P44049), MLTC_HISS1 (Q0I513), MLTC_HISS2 (B0UWE6), MLTC_KLEP3 (B5XU88), MLTC_KLEP7 (A6TDX1), MLTC_MANSM (Q65VT8), MLTC_PASMU (Q9CLB8), MLTC_PECAS (Q6D8K0), MLTC_PHOLL (Q7N7I2), MLTC_SALAR (A9MQR3), MLTC_SALCH (Q57K03), MLTC_SALPA (Q5PMM0), MLTC_SALPB (A9N4R0), MLTC_SALTI (Q8Z3T9), MLTC_SALTY (Q8ZM39), MLTC_SERP5 (A8GJ50), MLTC_SHIB3 (B2U178), MLTC_SHIBS (Q31WM5), MLTC_SHIDS (Q32C32), MLTC_SHIF8 (Q0T0S4), MLTC_SHIFL (Q83Q83), MLTC_SHISS (Q3YXF0), MLTC_SODGM (Q2NRB3), MLTC_YERE8 (A1JPV7), MLTC_YERP3 (A7FEX3), MLTC_YERPA (Q1CB94), MLTC_YERPB (B2K0V2), MLTC_YERPE (Q8ZHE6), MLTC_YERPG (A9R6R2), MLTC_YERPN (Q1CEV1), MLTC_YERPP (A4TI58), MLTC_YERPS (Q666M2), MLTD_ECOL6 (P0AEZ8), MLTD_ECOLI (P0AEZ7), MLTE_BUCAI (P57352), MLTF1_ALKEH (Q0A9W6), MLTF2_ALKEH (Q0A9T8), MLTF_ACTP2 (A3N214), MLTF_ACTP7 (B3GYE5), MLTF_ACTPJ (B0BQV5), MLTF_AERHH (A0KJ50), MLTF_AERS4 (A4SNZ5), MLTF_ALCBS (Q0VRG6), MLTF_ALIF1 (Q5E750), MLTF_CELJU (B3PLH7), MLTF_CHRSD (Q1QZB1), MLTF_CITK8 (A8AD27), MLTF_COLP3 (Q47XX8), MLTF_DESOH (A8ZWR8), MLTF_ECO11 (B3Y154), MLTF_ECO24 (A7ZQ01), MLTF_ECO57 (Q8XA45), MLTF_ECODH (B1XB33), MLTF_ECOHS (A8A366), MLTF_ECOK1 (A1AE89), MLTF_ECOL5 (Q0TET0), MLTF_ECOL6 (Q8FF25), MLTF_ECOLC (B1IVR9), MLTF_ECOLI (P0AGC5), MLTF_ECOSM (B1LP71), MLTF_ECOUT (Q1R8H6), MLTF_ENT38 (A4WDC7), MLTF_ERWT9 (B2VEB4), MLTF_HAEDU (Q7VN03), MLTF_HAEI8 (Q4QNV4), MLTF_HAEIE (A5UAQ3), MLTF_HAEIG (A5UG36), MLTF_HAEIN (P44587), MLTF_HAHCH (Q2SK06), MLTF_HISS1 (Q0I361), MLTF_HISS2 (B0UUK3), MLTF_IDILO (Q5QWY4), MLTF_KLEP7 (A6TCH2), MLTF_MARN8 (A1U3J1), MLTF_NITMU (Q2Y6L9), MLTF_PASMU (Q9CPJ2), MLTF_PECAS (Q6D237), MLTF_PHOPR (Q6LU25), MLTF_PSE14 (Q48LX4), MLTF_PSEA7 (A6V102), MLTF_PSEAB (Q02RN8), MLTF_PSEAE (Q9HXN1), MLTF_PSEE4 (Q1I5L3), MLTF_PSEF5 (Q4KHS7), MLTF_PSEMY (A4XXV1), MLTF_PSEP1 (A5VZC8), MLTF_PSEPF (Q3KHL5), MLTF_PSEPG (B0KRE9), MLTF_PSEPK (Q88P17), MLTF_PSEPW (B1JDH3), MLTF_PSESM (Q886W7), MLTF_PSET1 (Q3IHZ1), MLTF_PSEU2 (Q4ZX03), MLTF_SALAR (A9MGY7), MLTF_SALCH (Q57LE4), MLTF_SALPA (Q5PIH0), MLTF_SALPB (A9N1U5), MLTF_SALTI (Q8Z4L5), MLTF_SALTY (Q8ZN28), MLTF_SERP5 (A8GI11), MLTF_SHIB3 (B2TXX1), MLTF_SHIBS (Q31XS9), MLTF_SHIDS (Q32D14), MLTF_SHIF8 (Q0T1W2), MLTF_SHIFL (P0AGC6), MLTF_SHISS (Q3YYZ7), MLTF_SODGM (Q2NS21), MLTF_STUS1 (A4VP14), MLTF_SULDN (Q30PQ0), MLTF_VIBC1 (A7MSG2), MLTF_VIBC3 (A5F353), MLTF_VIBCH (Q9KTN5), MLTF_VIBPA (Q87RW1), MLTF_VIBVU (Q8DF80), MLTF_VIBVY (Q7MN72), MLTF_YERE8 (A1JKM2), MLTF_YERP3 (A7FFU9), MLTF_YERPA (Q1C5E6), MLTF_YERPB (B2KA37), MLTF_YERPE (Q74SQ6), MLTF_YERPG (A9R413), MLTF_YERPN (Q1CKD3), MLTF_YERPP (A4TMX8), MLTF_YERPS (Q667W0), MLTF_YERPY (B1JRW4), SLT_ECO57 (P0AGC4), SLT_ECOLI (P0AGC3), SLT_HAEIN (P44888), SLT_SALTY (P39434), TBTA_ALTSM (P32820), TMP_BPSPB (O64046), YOMI_BACSU (O31976)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
27 sequences
MLTE_BUCBP (Q89AM2), MLTF_ACTSZ (A6VMD7), MLTF_ALTMD (B4RVK5), MLTF_CROS8 (A7MGZ5), MLTF_MAGMM (A0L862), MLTF_MANSM (Q65RJ5), MLTF_MARMM (Q0AQY9), MLTF_METFK (Q1H288), MLTF_SACD2 (Q21KP0), MLTF_SHEAM (A1S850), MLTF_SHEB5 (A3D6V0), MLTF_SHEB8 (A6WQN7), MLTF_SHEB9 (A9KWW4), MLTF_SHEDO (Q12PR8), MLTF_SHEFN (Q085S2), MLTF_SHEHH (B0TLJ6), MLTF_SHELP (A3QCH2), MLTF_SHEON (Q8EC56), MLTF_SHEPA (A8H256), MLTF_SHEPC (A4Y8T1), MLTF_SHESA (A0KUK5), MLTF_SHESH (A8FY01), MLTF_SHESM (Q0HKV0), MLTF_SHESR (Q0HX48), MLTF_SHESW (A1RHR2), MLTF_SHEWM (B1KLC4), MLTF_THIDA (Q3SJH8)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
SLT_ENTCL (P39433) |
| PDB [Detailed view] |
21 PDB
1QSA; 1QTE; 1SLY; 2Y8P; 3T36; 4C5F; 4HJV; 4OWD; 4OYV; 4OZ9; 4P0G; 4P11; 5A5X; 5AA1; 5AA2; 5AA3; 6GHZ; 6GI4; 6YT5; 7EYB; 7K5C » more |