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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS01165


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PURL: https://purl.expasy.org/prosite/signature/PS01165

Direct ScanProsite submission
General information about the entry

Entry name [info] COPPER_AMINE_OXID_2
Accession [info] PS01165
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-JUL-1999 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase copper-binding site signature.
Pattern [info] 
T-x-[GS]-x(2)-H-[LIVMF]-x(3)-E-[DE]-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.55 %
Recall (true positives / (true positives + false negatives)) 84.85 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

AMO1_ARTS1  (Q07121), AMO2_ARATH  (P0DO00), AMO2_ARTS1  (Q07123), 

AMO_ECOLI   (P46883), AMO_KLEAE   (P49250), AMO_KLEM8   (P80695), 
AMO_PICAN   (P12807), AMO_PINMG   (H2A0M3), AOC1_HUMAN  (P19801), 
AOC1_MOUSE  (Q8JZQ5), AOC1_PIG(Q9TRC7), AOC1_RAT(P36633), 
AOC2_HUMAN  (O75106), AOC2_MOUSE  (Q812C9), AOC3_BOVIN  (Q9TTK6), 
AOC3_HUMAN  (Q16853), AOC3_MOUSE  (O70423), AOC3_PONAB  (Q5R9I0), 
AOC3_RAT(O08590), AOCX_BOVIN  (Q29437), AOCY_BOVIN  (O46406), 
CAO1_SCHPO  (Q9P7F2), CAO2_SCHPO  (O42890), CAOA2_ARATH (F4IAX0), 
CAOA3_ARATH (F4IAX1), CAOG1_ARATH (Q8H1H9), CAOG2_ARATH (Q9M2B9), 
PAOX_ARTGO  (P46881)
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

AMO1_ASPNG  (Q12556), AMOH_ARTGO  (Q59118), AMO_LENCU   (P49252), 

AMO_PEA (Q43077), AO1_ARATH   (O23349)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

THII_PSEPK  (Q88CY4)


				
	

	

		PDB
[Detailed view]		
		
			142 PDB
			


			pdb_00001a2v; pdb_00001av4; pdb_00001avk; pdb_00001avl; pdb_00001d6u; pdb_00001d6y; pdb_00001d6z; pdb_00001dyu; pdb_00001ekm; pdb_00001iqx; pdb_00001iqy; pdb_00001iu7; 
			
				pdb_00001ivu; pdb_00001ivv; pdb_00001ivw; pdb_00001ivx; pdb_00001jrq; pdb_00001lvn; pdb_00001oac; pdb_00001pu4; pdb_00001qaf; pdb_00001qak; pdb_00001qal; pdb_00001rjo; 
				pdb_00001sih; pdb_00001sii; pdb_00001spu; pdb_00001tu5; pdb_00001ui7; pdb_00001us1; pdb_00001w4n; pdb_00001w5z; pdb_00001w6c; pdb_00001w6g; pdb_00001wmn; pdb_00001wmo; 
				pdb_00001wmp; pdb_00002bt3; pdb_00002c10; pdb_00002c11; pdb_00002cfd; pdb_00002cfg; pdb_00002cfk; pdb_00002cfl; pdb_00002cfw; pdb_00002cg0; pdb_00002cg1; pdb_00002cwt; 
				pdb_00002cwu; pdb_00002cwv; pdb_00002d1w; pdb_00002e2t; pdb_00002e2u; pdb_00002e2v; pdb_00002oov; pdb_00002oqe; pdb_00002pnc; pdb_00002w0q; pdb_00002wgq; pdb_00002wo0; 
				pdb_00002wof; pdb_00002woh; pdb_00002y73; pdb_00002y74; pdb_00002yx9; pdb_00002zl8; pdb_00003ala; pdb_00003amo; pdb_00003hi7; pdb_00003hig; pdb_00003hii; pdb_00003k5t; 
				pdb_00003kii; pdb_00003kn4; pdb_00003mph; pdb_00003n9h; pdb_00003nbb; pdb_00003nbj; pdb_00003sx1; pdb_00003sxx; pdb_00003t0u; pdb_00003wa2; pdb_00003wa3; pdb_00003x3x; 
				pdb_00003x3y; pdb_00003x3z; pdb_00003x40; pdb_00003x41; pdb_00003x42; pdb_00004btw; pdb_00004btx; pdb_00004bty; pdb_00004ev2; pdb_00004ev5; pdb_00004kfd; pdb_00004kfe; 
				pdb_00004kff; pdb_00005zou; pdb_00005zow; pdb_00005zox; pdb_00005zoy; pdb_00005zoz; pdb_00005zp0; pdb_00005zp1; pdb_00005zp2; pdb_00005zp3; pdb_00005zp4; pdb_00005zp5; 
				pdb_00005zp6; pdb_00005zp7; pdb_00005zp8; pdb_00005zp9; pdb_00005zpa; pdb_00005zpb; pdb_00005zpc; pdb_00005zpd; pdb_00005zpe; pdb_00005zpf; pdb_00005zpg; pdb_00005zph; 
				pdb_00005zpi; pdb_00005zpj; pdb_00005zpk; pdb_00005zpl; pdb_00005zpm; pdb_00005zpn; pdb_00005zpo; pdb_00005zpp; pdb_00005zpq; pdb_00005zpr; pdb_00005zps; pdb_00005zpt; 
				pdb_00006ezz; pdb_00006l9c; pdb_00007f8k; pdb_00007wir; pdb_00007wis; pdb_00007wno; pdb_00007wnp; pdb_00007ynh; pdb_00008j6g; pdb_00008s1z
			
			

			» more