PROSITE entry PS01261
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | UPF0020 |
| Accession [info] | PS01261 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00969 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0020 signature. |
| Pattern [info] |
D-P-[LIVMF]-C-G-[ST]-G-x(3)-[LI]-E. |
Numerical results [info]
| Total number of hits | 152 in 152 different sequences |
| Number of true positive hits | 152 in 152 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 28 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 84.44 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
152 sequences
RLMKL_ACIAD (Q6FCR7), RLMKL_ACIBC (B2HWX8), RLMKL_ACIBS (B0VLH0), RLMKL_ACIBY (B0VAL5), RLMKL_ACTP2 (A3MYD2), RLMKL_ACTP7 (B3GZQ0), RLMKL_ACTPJ (B0BRL8), RLMKL_ACTSZ (A6VMR3), RLMKL_AERS4 (A4SME4), RLMKL_ALCBS (Q0VQU5), RLMKL_ALIF1 (Q5E5B4), RLMKL_ALIFM (B5FE19), RLMKL_ALISL (B6ELD3), RLMKL_ALKEH (Q0A793), RLMKL_ALLVD (Q1W3E0), RLMKL_BUCAI (P57444), RLMKL_BUCAP (Q8K9I4), RLMKL_CITK8 (A8AID1), RLMKL_COLP3 (Q47Z09), RLMKL_CROS8 (A7MEX5), RLMKL_DESPS (Q6AQA5), RLMKL_ECO24 (A7ZK52), RLMKL_ECO57 (Q8XDB2), RLMKL_ECO5E (B5YT79), RLMKL_ECODH (B1X8Q2), RLMKL_ECOHS (A7ZYQ0), RLMKL_ECOK1 (A1A9L8), RLMKL_ECOL5 (Q0TJB3), RLMKL_ECOL6 (Q8FJ88), RLMKL_ECOLC (B1IVY4), RLMKL_ECOLI (P75864), RLMKL_ECOSM (B1LJR4), RLMKL_ECOUT (Q1RDR6), RLMKL_ENT38 (A4W8W0), RLMKL_ERWT9 (B2VDF6), RLMKL_FRAP2 (B0U0U4), RLMKL_FRAT1 (Q14HS5), RLMKL_FRATF (A7NCY2), RLMKL_FRATH (Q2A2U4), RLMKL_FRATM (B2SGG3), RLMKL_FRATN (A0Q621), RLMKL_FRATO (Q0BLC3), RLMKL_FRATT (Q5NGC3), RLMKL_FRATW (A4IXN4), RLMKL_HAEDU (Q7VP04), RLMKL_HAEI8 (Q4QP66), RLMKL_HAEIE (A5UB28), RLMKL_HAEIG (A5UFS2), RLMKL_HAEIN (P44524), RLMKL_HISS1 (Q0I4C6), RLMKL_HISS2 (B0UUM5), RLMKL_IDILO (Q5QX63), RLMKL_KLEP3 (B5XY56), RLMKL_KLEP7 (A6T742), RLMKL_LEGPA (Q5X969), RLMKL_LEGPC (A5I9H3), RLMKL_LEGPH (Q5ZZI8), RLMKL_LEGPL (Q5X0J6), RLMKL_MAGMM (A0L8B5), RLMKL_MANSM (Q65UK6), RLMKL_PASMU (Q9CNW9), RLMKL_PECAS (Q6D459), RLMKL_PHOLL (Q7N612), RLMKL_PHOPR (Q6LRA0), RLMKL_PROMH (B4EVC6), RLMKL_PSYA2 (Q4FTN9), RLMKL_PSYCK (Q1QCP8), RLMKL_PSYIN (A1SX09), RLMKL_PSYWF (A5WGC0), RLMKL_SACD2 (Q21JW7), RLMKL_SALA4 (B5F1U5), RLMKL_SALAR (A9MHU0), RLMKL_SALCH (Q57QU1), RLMKL_SALDC (B5FQZ1), RLMKL_SALEP (B5QZF1), RLMKL_SALG2 (B5R6B4), RLMKL_SALHS (B4TDY8), RLMKL_SALNS (B4T1Z1), RLMKL_SALPA (Q5PGE3), RLMKL_SALPB (A9N6Y0), RLMKL_SALPK (B5BBL9), RLMKL_SALSV (B4TRX1), RLMKL_SALTI (Q8Z7S6), RLMKL_SALTY (Q8ZQ73), RLMKL_SERP5 (A8GCK7), RLMKL_SHEAM (A1S601), RLMKL_SHEB5 (A3D5Q0), RLMKL_SHEB8 (A6WPK6), RLMKL_SHEB9 (A9L591), RLMKL_SHEDO (Q12LC6), RLMKL_SHEFN (Q07ZR3), RLMKL_SHEHH (B0TIX7), RLMKL_SHELP (A3QDY0), RLMKL_SHEON (Q8EFW4), RLMKL_SHEPA (A8H3Y1), RLMKL_SHEPC (A4Y5X4), RLMKL_SHESA (A0KVL6), RLMKL_SHESH (A8FW59), RLMKL_SHESM (Q0HJZ9), RLMKL_SHESR (Q0HWA0), RLMKL_SHESW (A1RKM2), RLMKL_SHEWM (B1KDN0), RLMKL_SHIB3 (B2TUD1), RLMKL_SHIBS (Q31YL1), RLMKL_SHIDS (Q32HV8), RLMKL_SHIF8 (Q0T686), RLMKL_SHIFL (Q83RX5), RLMKL_SHISS (Q3Z3H3), RLMKL_SODGM (Q2NU80), RLMKL_STRM5 (B4SQ79), RLMKL_STRMK (B2FJ58), RLMKL_SYNC1 (Q3A2U5), RLMKL_VIBC1 (A7N0M8), RLMKL_VIBC3 (A5F836), RLMKL_VIBCH (Q9KRZ5), RLMKL_VIBPA (Q87PC0), RLMKL_VIBVY (Q7MKX1), RLMKL_XANAC (Q8PM40), RLMKL_XANC8 (Q4UT85), RLMKL_XANCB (B0RV07), RLMKL_XANCP (Q8PAE0), RLMKL_XANE5 (Q3BV47), RLMKL_XANOM (Q2P309), RLMKL_XANOP (B2SIS8), RLMKL_XANOR (Q5H029), RLMKL_XYLF2 (B2IA87), RLMKL_XYLFA (Q9PA69), RLMKL_XYLFM (B0U5Z5), RLMKL_XYLFT (Q87A16), RLMKL_YERE8 (A1JMQ6), RLMKL_YERP3 (A7FJT9), RLMKL_YERPA (Q1CA41), RLMKL_YERPB (B2JYS1), RLMKL_YERPE (Q7CHK7), RLMKL_YERPG (A9R7L5), RLMKL_YERPN (Q1CGJ3), RLMKL_YERPP (A4TMZ0), RLMKL_YERPS (Q66CG1), RLMKL_YERPY (B1JQR7), RLML_NEIMB (Q9K0V4), THUM3_BOVIN (Q2T9W2), THUM3_HUMAN (Q9BV44), THUM3_MOUSE (P97770), TMG10_ARCFU (O29011), TMG10_METJA (Q58120), TMG10_METTH (O26820), TMG10_METTL (P05409), TRM14_ARCFU (O28105), TRM14_METJA (Q57880), TRM14_PYRFU (Q8U248), Y064_SYNY3 (Q55156), YPSC_BACSU (P50840)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
28 sequences
RLMKL_AERHH (A0KKK7), RLMKL_ALTMD (B4RZ48), RLMKL_CELJU (B3PIL6), RLMKL_CHRSD (Q1QXV9), RLMKL_DICNV (A5EX48), RLMKL_HAHCH (Q2SCH1), RLMKL_HYDCU (Q31IC8), RLMKL_MARMS (A6VW36), RLMKL_MARN8 (A1TZG2), RLMKL_METCA (Q60AX5), RLMKL_PSE14 (Q48JX8), RLMKL_PSEA6 (Q15UB5), RLMKL_PSEA7 (A6V328), RLMKL_PSEAE (Q9HZG0), RLMKL_PSEE4 (Q1ICL2), RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEMY (A4XWP8), RLMKL_PSEP1 (A5W6K7), RLMKL_PSEPF (Q3KFC5), RLMKL_PSEPG (B0KG92), RLMKL_PSEPK (Q88L39), RLMKL_PSEPW (B1J5B7), RLMKL_PSESM (Q883N9), RLMKL_PSET1 (Q3IGZ3), RLMKL_PSEU2 (Q4ZUM1), RLMKL_STUS1 (A4VM39), TMG10_PYRAB (Q9UY84), TRMN_THET2 (Q72IH5)» more |
| PDB [Detailed view] |
8 PDB
3TLJ; 3TM4; 3TM5; 3V8V; 3V97; 6ZXV; 6ZXW; 6ZXY |