We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS01305
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PURL: https://purl.expasy.org/prosite/signature/PS01305
Direct ScanProsite submission
General information about the entry
| Entry name [info] | MOAA_NIFB_PQQE |
| Accession [info] | PS01305 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUL-1998 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01009 |
Name and characterization of the entry
| Description [info] | moaA / nifB / pqqE family signature. |
| Pattern [info] |
[LIV]-x(3)-C-[NDP]-[LIVMF]-[DNQRS]-C-x-[FYM]-C. |
Numerical results [info]
| Total number of hits | 308 in 308 different sequences |
| Number of true positive hits | 294 in 294 different sequences |
| Number of 'unknown' hits | 1 |
| Number of false positive hits | 13 in 13 different sequences |
| Number of false negative sequences | 56 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 95.77 % |
| Recall (true positives / (true positives + false negatives)) | 84.00 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | iron_sulfur(?) at position 3 |
| Site [info] | iron_sulfur(?) at position 7 |
| Site [info] | iron_sulfur(?) at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
294 sequences
CMO_PYRFU (Q51741), CNX2_ARATH (Q39055), FIXZ_RHILE (P07748), MOAA1_MYCBO (Q7TX84), MOAA1_MYCTO (P9WJS2), MOAA1_MYCTU (P9WJS3), MOAA1_PSEAE (Q9HXD6), MOAA2_MYCBO (P65385), MOAA2_MYCTO (P9WJS0), MOAA2_MYCTU (P9WJS1), MOAA2_PSEAE (Q9I3K7), MOAA3_MYCBO (P62588), MOAA3_MYCTO (P62589), MOAA_ACAM1 (B0CDZ6), MOAA_ACIC1 (A0LVG0), MOAA_ACTP2 (A3N054), MOAA_ACTP7 (B3GXC5), MOAA_ACTPJ (B0BNX2), MOAA_ACTSZ (A6VPY2), MOAA_AERHH (A0KIL8), MOAA_AERPE (Q9YEV3), MOAA_AGRFC (Q8UER0), MOAA_ALIB4 (A8ERS0), MOAA_ALKMQ (A6TVF9), MOAA_ALKOO (A8MLW5), MOAA_AQUAE (O67929), MOAA_ARCFU (O28273), MOAA_BACAC (C3LA56), MOAA_BACCN (A7GU01), MOAA_BACLD (Q65DY5), MOAA_BACSU (P39757), MOAA_BACVZ (A7Z9P0), MOAA_BRADU (Q89NT2), MOAA_BREBN (C0Z9B3), MOAA_BRUA1 (B2S5I1), MOAA_BRUA2 (Q2YNT7), MOAA_BRUAB (Q57DG3), MOAA_BRUC2 (A9MAX5), MOAA_BRUMB (C0RIT4), MOAA_BRUME (Q8YGY6), MOAA_BRUO2 (A5VQC9), MOAA_BRUSI (B0CLT0), MOAA_BRUSU (Q8G0X4), MOAA_CAMC1 (A7ZB87), MOAA_CAMC5 (A7GWA5), MOAA_CAMFF (A0RMJ2), MOAA_CAMJ8 (A8FJX0), MOAA_CAMJD (A7H1N9), MOAA_CAMJE (Q9PIW6), MOAA_CAMJJ (A1VXP5), MOAA_CAMJR (Q5HX04), MOAA_CAMLR (B9KDV3), MOAA_CARHZ (Q3ADX8), MOAA_CAUVC (Q9AC48), MOAA_CHLTE (P59038), MOAA_CLOAB (Q97HL8), MOAA_CLOB1 (A7FUZ6), MOAA_CLOB6 (C3KXJ8), MOAA_CLOBH (A5I365), MOAA_CLOBJ (C1FPG7), MOAA_CLOBK (B1IN35), MOAA_CLOBL (A7GEQ5), MOAA_CLOBM (B1KU20), MOAA_CLOP1 (Q0TPG6), MOAA_CLOPE (Q9WX96), MOAA_CLOPS (Q0SS32), MOAA_CORGB (A4QDF8), MOAA_CORGL (Q8NR60), MOAA_CROS5 (B1X0G3), MOAA_CROS8 (A7MJ10), MOAA_CYAP4 (B8HWW4), MOAA_DESRM (A4J6S5), MOAA_DINSH (A8LIR8), MOAA_ECO24 (A7ZJJ0), MOAA_ECO27 (B7ULX8), MOAA_ECO45 (B7MGN9), MOAA_ECO55 (B7LC63), MOAA_ECO57 (P65383), MOAA_ECO5E (B5YRM0), MOAA_ECO7I (B7NNL1), MOAA_ECO81 (B7MQN5), MOAA_ECO8A (B7M753), MOAA_ECOBW (C4ZXV3), MOAA_ECODH (B1X7B1), MOAA_ECOHS (A7ZY37), MOAA_ECOL6 (P65382), MOAA_ECOLI (P30745), MOAA_ECOLU (B7NA81), MOAA_ECOSE (B6I7T6), MOAA_ECOSM (B1LM72), MOAA_ECTM1 (A4XW05), MOAA_EDWI9 (C5B7H2), MOAA_ERYLH (Q2NCE3), MOAA_ESCF3 (B7LJY1), MOAA_GEOSL (Q747W9), MOAA_GLOVI (Q7NCF5), MOAA_HAEDU (Q7VLN1), MOAA_HAEI8 (Q4QJR9), MOAA_HAEIE (A5UBK4), MOAA_HAEIG (A5UFB4), MOAA_HAEIN (P45311), MOAA_HALH5 (Q9K9W9), MOAA_HALS3 (B0R2L5), MOAA_HALSA (Q9HST4), MOAA_HALWD (Q18G49), MOAA_HELMI (B0TI16), MOAA_HELP2 (B6JM01), MOAA_HELPH (Q1CTA2), MOAA_HELPJ (Q9ZL75), MOAA_HELPY (P56414), MOAA_KLEP3 (B5XYW6), MOAA_KLEP7 (A6T6M5), MOAA_LACPL (Q88WY1), MOAA_LIMF3 (B2GCN4), MOAA_LISIN (Q92CY2), MOAA_LISMC (C1L1W8), MOAA_LISMF (Q721B9), MOAA_LISMO (Q8Y870), MOAA_LISW6 (A0AHG0), MOAA_MAGMM (A0L7R4), MOAA_MARN8 (A1U578), MOAA_MARSD (C6C060), MOAA_META3 (A6UX30), MOAA_METAC (Q8TUG2), MOAA_METJA (Q58234), MOAA_METMA (Q8PX29), MOAA_METS5 (A4YH62), MOAA_METTH (O27593), MOAA_METTM (Q50746), MOAA_MICAN (B0JNC2), MOAA_MOOTA (Q2RGL2), MOAA_MYCMM (B2HFA4), MOAA_MYCS2 (A0R443), MOAA_MYCSJ (A3Q648), MOAA_MYCSK (A1ULP7), MOAA_MYCSS (Q1B3F3), MOAA_MYCUA (A0PKZ7), MOAA_NAUPA (B9L851), MOAA_NITHX (Q1QN98), MOAA_NITSB (A6Q5D0), MOAA_NITWN (Q3STB0), MOAA_NOSP7 (B2J1M7), MOAA_NOSS1 (Q8YQG6), MOAA_PAENI (Q44118), MOAA_PARDP (A1B4A2), MOAA_PASMU (Q9CN21), MOAA_PECAS (Q6D3C7), MOAA_PELTS (A5CYZ0), MOAA_PEPAC (Q93KD1), MOAA_PETMO (A9BF51), MOAA_PHOLL (Q7N6P6), MOAA_PICP2 (B1XLR4), MOAA_PSE14 (Q48HV8), MOAA_PSEE4 (Q1I6J5), MOAA_PSEP1 (A5VZZ2), MOAA_PSEPF (Q3KAS8), MOAA_PSEPG (B0KST1), MOAA_PSEPK (Q88E69), MOAA_PSEPW (B1JCW0), MOAA_PSESM (Q882V6), MOAA_PSEU2 (Q4ZU05), MOAA_PYRAB (Q9V2G2), MOAA_PYRFU (Q8U4J5), MOAA_PYRHO (O57854), MOAA_RALN1 (Q8Y0K4), MOAA_RHIE6 (B3PQ08), MOAA_RHIEC (Q2K7L4), MOAA_RHILO (Q98MK6), MOAA_RHILW (B5ZRM8), MOAA_RHIME (Q92PB4), MOAA_RHOBA (Q7UT69), MOAA_RHOCA (Q9X5W3), MOAA_RHOPA (Q3V7S1), MOAA_RHOPS (Q139F2), MOAA_RHOPT (B3QCQ7), MOAA_RIPO1 (B7JWW6), MOAA_SACD2 (Q21I62), MOAA_SALA4 (B5F079), MOAA_SALDC (B5FP68), MOAA_SALEP (B5QX73), MOAA_SALG2 (B5R769), MOAA_SALHS (B4TC55), MOAA_SALNS (B4SZK4), MOAA_SALPA (Q5PG37), MOAA_SALPB (A9MTH7), MOAA_SALPC (C0PWZ0), MOAA_SALPK (B5BC24), MOAA_SALSV (B4TQU6), MOAA_SALTI (P65387), MOAA_SALTY (P65386), MOAA_SHIB3 (B2TVE9), MOAA_SHIBS (Q324B1), MOAA_SHIDS (Q32I50), MOAA_SHIFL (Q83S40), MOAA_SHISS (Q3Z403), MOAA_SINMW (A6U9U3), MOAA_STAA1 (A7X5J1), MOAA_STAA2 (A6U3Z2), MOAA_STAA3 (Q2FEM4), MOAA_STAA8 (P69848), MOAA_STAA9 (A5IV50), MOAA_STAAB (Q2YYS8), MOAA_STAAC (Q5HDT9), MOAA_STAAE (A6QJA8), MOAA_STAAM (Q931G4), MOAA_STAAN (P65388), MOAA_STAAR (Q6GEG6), MOAA_STAAS (Q6G754), MOAA_STAAT (A8Z366), MOAA_STAAW (P65389), MOAA_STACT (Q9ZIM6), MOAA_STAEQ (Q5HLY1), MOAA_STAES (Q8CNE6), MOAA_STAHJ (Q4L8D2), MOAA_STAS1 (Q49ZI6), MOAA_STRCO (Q9RJ47), MOAA_STRM5 (B4SL67), MOAA_STRMK (B2FUM0), MOAA_SULDN (Q30P92), MOAA_SULNB (A6Q6R2), MOAA_SULTO (Q971H1), MOAA_SYNE7 (Q56211), MOAA_SYNJB (Q2JI46), MOAA_SYNP6 (Q5N5F7), MOAA_SYNWW (Q0AVU6), MOAA_SYNY3 (Q55369), MOAA_THEAC (Q9HKZ7), MOAA_THEVO (Q979T0), MOAA_THEYD (B5YJ09), MOAA_TOLAT (C4LFK3), MOAA_TRIEI (Q119N9), MOAA_TRIV2 (Q3MC34), MOAA_XANAC (Q8PNH1), MOAA_XANC8 (Q4URN0), MOAA_XANCB (B0RTE0), MOAA_XANCP (Q8PBX1), MOAA_YERPE (Q8ZGW5), MOCS1_BOVIN (Q1JQD7), MOCS1_CAEEL (Q20624), MOCS1_DICDI (Q54NM6), MOCS1_DROME (Q8IQF1), MOCS1_HUMAN (Q9NZB8), MOCS1_MOUSE (Q5RKZ7), NEOEP_STRFR (Q53U14), NIFB_AZOVI (P11067), NIFB_BRADU (P06770), NIFB_CHLTE (Q8KC85), NIFB_FRAAL (P46044), NIFB_HERSE (P27714), NIFB_KLEOX (P56265), NIFB_KLEPN (P10390), NIFB_NOSS1 (P20627), NIFB_RHILE (P09825), NIFB_RHILT (P24427), NIFB_RHIME (P09824), NIFB_RHOCA (P17434), NIFB_SINFN (Q53205), NIFB_TRIAZ (Q43883), PQQE_ACIAD (Q6F9I9), PQQE_ACIB3 (B7H2Y0), PQQE_ACIB5 (B7I6M8), PQQE_ACIBC (B2I0I5), PQQE_ACIBY (B0V494), PQQE_ACICA (P07782), PQQE_AZOVD (C1DEW5), PQQE_BRADU (Q89FG1), PQQE_ECTM1 (A4XTR4), PQQE_ERWT9 (B2VL10), PQQE_GLUOX (Q9L3B0), PQQE_GRABC (Q0BQS8), PQQE_KLEP3 (B5XX58), PQQE_KLEP7 (A6T9H2), PQQE_KLEPN (P27507), PQQE_KLUIN (P59748), PQQE_METC4 (B7KXC6), PQQE_METCA (Q608P0), PQQE_METEA (P71517), PQQE_METEP (A9W3R0), PQQE_METNO (B8ITV7), PQQE_METPB (B1ZIB2), PQQE_METRJ (B1LUE7), PQQE_METS4 (B0UE13), PQQE_PSE14 (Q48CT3), PQQE_PSEA8 (B7VAB6), PQQE_PSEAB (Q02LD6), PQQE_PSEAE (Q9I2C0), PQQE_PSEF5 (Q4K4U8), PQQE_PSEP1 (A5VXG4), PQQE_PSEPK (Q88QV8), PQQE_PSESM (Q88A84), PQQE_PSEU2 (Q4ZMC1), PQQE_PSEVU (Q01060), PQQE_RHOPA (Q6N8F3), SKFB_BACSU (O31423)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
56 sequences
AHBC_METBF (Q46BK8), AHBD_METBF (Q46CH7), AHBD_NITV2 (Q72DS4), AHBD_OLEA2 (Q30Y73), MOAA_HYDCU (Q31JB9), MOAA_MANSM (Q65TT2), MOAA_METAR (Q0W3L5), MOAA_METKA (Q8TV60), MOAA_METM5 (A4FYQ8), MOAA_METM6 (A9A661), MOAA_METM7 (A6VJM2), MOAA_METMP (Q6LZQ3), MOAA_METVS (A6US67), MOAA_PARMW (Q7U3H2), MOAA_PSYIN (A1SWQ3), MOAA_PYRAE (Q8ZYE5), MOAA_RHOJR (Q0S2N2), MOAA_RHOOB (C1B1N5), MOAA_SACI1 (C3NGB5), MOAA_SACI2 (C3MR64), MOAA_SACI3 (C3MZ99), MOAA_SACI4 (C3MXF3), MOAA_SACI6 (C4KIH7), MOAA_SACI7 (C3N7B9), MOAA_SACS2 (Q980F0), MOAA_SHEDO (Q12T28), MOAA_SULAC (Q4J8T0), MOAA_SYNPW (Q9EYN8), MOAA_SYNS9 (Q3AVP9), MOAA_SYNSC (Q3AGB7), MOAA_THEKO (Q5JHN5), MOAA_VIBA3 (B7VLU4), MOAA_VIBC3 (A5F2Q5), MOAA_VIBCH (Q9KT81), MOAA_VIBCM (C3LTS1), MOAA_VIBPA (Q87MY0), MOAA_VIBVU (Q8D894), MOAA_VIBVY (Q7MM75), NIFB_METIM (D5VRM1), NIFB_METJA (Q58493), NIRJ_DINSH (A8LLZ7), NIRJ_PARPN (A0A1I5E523), PQQE_ACIBS (B0VQD7), PQQE_METSB (B8ENI9), PQQE_RAHAQ (O33506), PQQE_RHIME (Q9EXU8), PQQE_RUEPO (Q5LTB4), PQQE_STRRO (P59749), PQQE_XANAC (Q8PHY1), PQQE_XANC8 (Q4UXI4), PQQE_XANCB (B0RQ25), PQQE_XANCP (Q8P6M7), PQQE_XANE5 (Q3BQI4), PQQE_XANOM (Q2P4Y9), PQQE_XANOP (B2SSW3), PQQE_XANOR (Q5H234)» more |
| UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
SAND_FLAPC (A0A1S1YUU1) |
| UniProtKB/Swiss-Prot False positive sequences |
13 sequences
BCHQ_CHLTE (Q8KBK9), MIAB_HERA2 (A9AZY8), MIAB_OPITP (B1ZVI7), MIAB_ROSS1 (A5UUG7), RIMO_CHLAA (A9WDA3), RIMO_HERA2 (A9AZS3), RIMO_ROSCS (A7NIS8), RIMO_ROSS1 (A5UQQ2), SAND_LACM4 (P0DW53), Y285_HELPJ (Q9ZMF0), Y285_HELPY (P56130), Y804_METJA (Q58214), Y907_METJA (Q58317)» more |
| PDB [Detailed view] |
6 PDB
pdb_00001tv7; pdb_00001tv8; pdb_00002fb2; pdb_00002fb3; pdb_00006c8v; pdb_00006efn |