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PROSITE entry PS50318

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General information about the entry

Entry name [info]	LYS_RICH
Accession [info]	PS50318
Entry type [info]	MATRIX
Date [info]	01-APR-2002 CREATED; 01-APR-2002 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC50099

Name and characterization of the entry

Description [info]

Lysine-rich region profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=2;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=2;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1803; R2=0.14343843; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=52; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=38; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: SY_I='K'; I0=-1; M0=-1;

...

                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/M: SY='K';  M= -1, -1, -1, -1, -1, -1, -1, -1, -1,  5, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
/I:         MI=0; IM=0; I=-1,-1,-1,-1,-1,-1,-1,-1,-1,5,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1;
/M: SY='K';  M= -1, -1, -1, -1, -1, -1, -1, -1, -1,  5, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;

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Comments [info]

Matrix type [info]	composition
Scaling database [info]	db_global
Author [info]	P_Bucher
Skip flag [info]	TRUE
Version [info]	3