PROSITE entry PS51123
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS51123 |
| Entry name [info] | OMPA_2 |
| Accession [info] | PS51123 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JUN-2005 CREATED;
01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00819 |
| Associated ProRule [info] | PRU00473 |
Name and characterization of the entry
| Description [info] | OmpA-like domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=119; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=114; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0320632; R2=0.0284236; TEXT='NScore'; /CUT_OFF: LEVEL=0; SCORE=193; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=123; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: B1=*; E1=*; MM=*; II=*; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=-85; E0=*; BD=-80; /M: SY='Y'; M= -4, -21, -12, 11, -23, 1, -9, -19, -6, -20, 14, -9, -23, 13, 7, -11, -11, 15, -24, 15; M0=-6; /I: MM=0; MI=-85; MD=-95; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= 13, -24, 15, -10, -30, 11, -13, -27, -10, -28, 12, -13, -25, -9, -14, 7, 15, -23, -30, -24; M0=-9; /I: MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='W'; M= 1, -25, 3, 12, 10, -22, -8, -25, 10, 5, -16, -8, -23, 8, -9, -11, 4, -21, 22, -21; M0=-5; /I: MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -12, -26, -10, 9, -29, -22, 14, -26, 7, 3, -17, -8, -22, 16, 2, 3, 5, 9, -28, -21; M0=-6; /I: MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= 2, -12, 7, -29, 13, -29, -18, 20, -25, 7, -4, -25, -29, 4, -24, -20, -13, 12, -17, -13; M0=-9; /I: MM=0; MI=-86; MD=-96; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -5, -12, -17, -5, 2, -12, -15, 18, -12, 8, -10, -11, -4, 0, -5, -6, -4, 13, -14, -14; M0=-4; /I: MM=-84; MI=0; MD=-143; IM=0; II=-110; DM=-7; DD=-14; /M: SY='L'; M= -1, -65, -3, -2, 6, -12, -24, 11, -10, 15, 13, -11, -13, -4, -2, -9, -16, 1, -67, -5; M0=-5; /I: MM=-84; MI=0; MD=-143; IM=0; II=-110; DM=-7; DD=-14; /M: SY='S'; M= 5, -66, 9, -1, -4, 3, 1, -18, -3, -7, -6, 8, -19, -2, 0, 11, -2, -5, -68, -7; M0=-4; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 1, -66, 19, 1, -34, -1, -48, -13, 3, -17, -5, 10, -9, -5, 2, 3, 5, -1, -68, -14; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= -11, -20, -21, -18, -4, -9, -56, 21, -15, 4, -47, -12, -14, -22, -34, -9, -3, 22, -59, -6; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Y'; M= -14, -65, -24, -7, 17, -26, 14, -28, -14, 16, 11, -5, -16, 2, -5, -7, -1, -29, -19, 20; M0=-9; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='F'; M= -38, -58, -83, -77, 45, -75, -62, -32, -36, -23, -49, -71, -75, -22, -70, -66, -36, -13, -59, -7; M0=-45; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 12, -67, 25, 9, -70, -4, -22, -35, -4, -21, -16, 2, 7, -2, -5, -16, -22, -20, -68, -4; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='F'; M= -16, -62, -34, -16, 27, -29, -14, -6, -14, -6, -15, -3, 8, -12, -13, 9, 12, -2, -18, 6; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= -11, -67, 27, -20, -23, 24, -48, -67, -21, -42, -24, 16, -15, -20, -19, -18, -20, -63, -68, -18; M0=-22; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='S'; M= -16, -19, -6, -7, -33, -13, -24, -37, 18, -34, -15, -14, -24, 11, -3, 27, -16, -30, -68, -62; M0=-15; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 23, -66, 5, -34, -6, -20, -4, -23, -12, -66, -23, -24, -10, -16, -32, 13, 3, -14, -7, 19; M0=-15; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= -3, -66, 11, 13, -18, -18, -7, -13, 6, -22, -17, 6, -62, 6, 4, 0, 11, 3, -68, -19; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -25, -53, -78, -38, -7, -39, -59, 22, -36, 24, -14, -32, -11, -64, -66, -22, -35, 12, -58, -54; M0=-26; /I: MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M= -7, -66, 7, -11, -21, -21, -15, -28, 17, -9, -25, 13, -10, 4, 10, 10, 7, -14, -68, -61; M0=-9; /I: MM=-2; MI=-32; MD=-142; IM=-10; II=-10; DM=-4; DD=-22; /M: SY='P'; M= 11, -67, 6, 5, -24, -12, -48, -67, 4, -19, -26, -9, 27, -2, -19, 1, -15, -24, -15, -62; M0=-13; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 6, -67, 12, 21, -24, -8, -14, -22, 5, -17, -25, -1, -21, 6, 0, 5, -14, -25, -15, -14; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 15, -20, 1, -9, 11, 11, -14, -8, -25, -17, -7, -5, -21, 2, -24, 12, -9, -20, -14, 7; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -2, -66, -15, 2, -3, -38, -6, -6, 15, -5, 5, -14, -35, 18, 13, -15, -6, -6, 0, 13; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 6, -67, 2, 7, -70, -10, -9, -15, 6, -17, -10, -8, 17, 14, 5, 0, -2, -15, -68, -10; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= 2, -21, -6, 1, -24, -38, -13, 7, 2, 7, -4, 7, -17, 4, -4, -4, 8, 7, -1, -20; M0=-4; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -11, -18, -37, -37, -22, -38, -23, 14, -38, 28, -10, -19, -33, -12, -66, -37, -54, 5, -58, -54; M0=-23; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 3, -9, 22, 4, -13, -10, -16, -19, 7, -16, -16, 10, -24, 12, -3, 0, -13, -20, -68, -14; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -1, -23, 4, 12, -33, -10, -15, -18, 14, -11, -24, 3, -9, 12, 15, -9, -3, -14, -6, -20; M0=-5; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -6, -53, -39, -39, 5, -70, 1, 22, -37, 15, 8, -10, -71, -11, -66, -30, -5, 16, -58, -27; M0=-21; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 30, -12, -27, -19, -16, -5, -24, -2, -15, -8, -23, -20, -67, -32, -19, -12, -18, 2, -61, -15; M0=-14; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= 5, -23, 10, 14, -70, -12, -15, -19, 7, -16, -57, 5, -16, 16, 7, 3, -6, -17, -68, -30; M0=-9; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Y'; M= 6, -21, -17, -6, 14, -21, -26, 9, 1, 5, -3, -19, -20, 1, -10, -13, -5, 6, 8, 15; M0=-4; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -11, -53, -35, -72, -4, -40, -59, 14, -27, 27, 18, -67, -71, -64, -66, -40, -20, 0, -58, -19; M0=-28; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M= 2, -22, -9, -2, -22, -7, -9, -6, 23, -10, -57, 8, -35, 8, 11, -3, -9, -12, -68, -62; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= 9, -67, 2, 10, -14, -6, -9, -23, 10, -17, -57, 10, -17, 11, 3, 5, -1, -20, -17, -13; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Y'; M= -7, 0, -1, -11, 3, -8, 20, -11, -5, 0, -11, 17, -17, 0, -12, -9, -4, 2, -17, 20; M0=-3; /I: MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= -4, -66, 7, -11, -32, -7, -15, -28, 5, -25, -25, 5, 31, -3, -13, -1, -7, -21, -68, -15; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-15; DD=-6; /M: SY='N'; M= -4, -66, 12, 11, -11, 6, -13, -8, -2, -7, -26, 14, 0, 5, -7, -8, -1, -5, -17, -15; M0=-4; /I: MM=-1; MI=-132; MD=-41; IM=-9; II=-11; DM=-15; DD=-6; /M: SY='T'; M= 6, -65, -10, -4, -32, -17, -9, 2, 9, -3, -10, 0, -2, 1, 1, 0, 11, 0, 4, 6; M0=-3; /I: MM=-7; MI=-19; MD=-32; IM=-11; II=-9; DM=0; DD=-50; /M: SY='R'; M= -9, -65, 2, -3, -22, -17, 12, -14, 16, -17, -8, 7, -15, -3, 17, 2, 6, -6, -67, -3; M0=-6; /I: MM=0; MI=-131; MD=-141; IM=-9; II=-11; DM=0; DD=-56; /M: SY='I'; M= -10, -53, -78, -72, 8, -25, -59, 26, -37, 5, -11, -67, -71, -64, -66, -61, -28, 24, -16, -10; M0=-31; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -14, -21, -13, 12, -6, -38, -5, 7, 3, 2, 1, -4, -63, 2, 12, -13, 10, 7, -17, -15; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -27, -70,-102, -98, -17, -39, -99, 29, -98, 5, -26, -97, -97, -96, -99, -94, -75, 27, -92, -88; M0=-56; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 3, -67, 2, 20, -24, -18, -13, 3, -8, -25, -57, -10, -63, -6, -6, 3, 8, 10, -68, -2; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M= -13, -68, -96, -99, -96, 38, -89, -94, -96, -97, -87, -79, -35, -90, -92, -24, -36, -80, -98, -30; M0=-64; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='H'; M= -38, -56, -25, -36, 5, -70, 48, -51, -62, -32, -23, -5, -34, -60, -10, -60, -55, -34, -59, 28; M0=-36; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= 12, 3, -36, -74, -77, -39, -24, -73, -73, -76, -68, -36, -76, -71, -26, -2, 36, -28, -80, -28; M0=-41; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= -19, -11, 40, -18, -98, -17, -69, -98, -73, -96, -90, -23, -80, -30, -83, -1, -38, -92, -98, -33; M0=-49; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M= 4, -67, 3, 0, -14, -13, -7, -37, -2, -35, -57, 21, -1, -9, 1, 18, 2, -20, -68, -21; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -9, -64, -5, -12, -23, -21, -49, 5, 1, -4, -4, -5, -63, 3, 16, -1, 15, 12, -19, -14; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M= -12, -21, -16, -13, -70, 33, -23, -35, -32, -44, -57, -31, 16, -16, -10, -29, -10, -37, -68, -62; M0=-23; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='S'; M= -6, -64, -4, -14, -9, -3, -23, 6, -9, -16, -24, 2, 7, -45, -9, 21, 12, -14, -18, -15; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 7, -67, 18, 8, -24, -8, 1, -18, 4, -22, -25, 0, 5, -7, 7, 3, -9, -25, -17, 5; M0=-6; /I: MM=-19; MI=-132; MD=-5; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= -1, -49, -16, -4, -14, 2, -30, -5, 3, -49, -40, 11, 8, -9, -6, 14, 17, -12, -51, -44; M0=-9; /I: MM=-65; MI=-2; MD=-31; IM=-14; II=-7; DM=-77; /M: SY='F'; M= -11, -41, -6, -8, 30, -11, -31, -15, -13, -14, -33, -12, -16, -28, -1, -18, 5, -17, 13, 26; M0=-10; /I: MM=0; MI=-112; MD=-122; IM=-9; II=-11; DM=0; DD=-85; /M: SY='E'; M= 11, -67, 4, 17, -34, -8, -24, -10, 10, -25, -25, -8, 5, 5, -11, 5, -8, -29, -68, -5; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Y'; M= 1, -64, 7, -12, -8, -11, 6, -9, -17, -30, -16, -11, -20, -45, -7, 8, -9, -10, -7, 36; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M= -20, -67, -16, -17, -70, -29, -24, -37, -20, -42, -23, 43, -34, -21, -24, -28, -51, -63, -68, -62; M0=-31; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='W'; M= -10, -60, -6, -6, -4, -64, -13, 2, -3, 7, 14, -13, -65, 23, 1, -54, -21, -20, 38, 3; M0=-15; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 9, -67, 6, 13, -32, -12, -2, -4, 12, -26, -23, -4, -15, 11, 10, -6, -8, -12, -8, -14; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -83, -77,-107, -29, -32, -39, -91, -2, -99, 32, -50,-100, -97, -89, -95, -97, -81, -2, -79, -29; M0=-57; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='S'; M= 3, -68, -94, -42, -96, 6, -89, -94, -96, -97, -87, -79, -79, -90, -92, 34, -10, -80, -98, -98; M0=-60; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 8, -66, -9, 21, -18, -16, -48, -19, 0, 3, 3, -15, -63, 15, 0, -6, -9, -9, -68, -10; M0=-9; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= 13, -67, -13, 2, -70, -21, -14, -30, 12, -14, -27, 2, -62, 14, 26, -18, -32, -38, -68, -29; M0=-17; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -44, -85, -93, -77, -89, -85, -65, -90, -51, -86, -80, -74, -85, -17, 42, -80, -78, -88, -82, -30; M0=-68; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 36, -68, -96,-100, -96, -21, -89, -94, -96, -45, -87, -80, -79, -90, -92, -6, -22, -30, -98, -98; M0=-58; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= 0, -23, 3, 13, -33, -16, -15, -3, 2, -2, -14, 14, -63, 19, 0, -6, -4, -7, -68, -10; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 23, -64, -52, -4, -31, -62, -49, -29, -25, -64, -16, 10, -35, -15, -13, 19, 5, -3, -15, -18; M0=-20; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= -1, -66, -95, -91, -13, -91, -84, 4, -89, -15, -10, -87, -90, -86, -88, -32, -30, 36, -81, -77; M0=-49; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 18, -57, -61, -13, -30, -12, -24, -13, 15, -3, 2, -56, -67, -4, 17, -20, -9, 4, -61, 5; M0=-14; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 7, -20, 19, 7, -70, -12, 3, -37, 2, -35, -12, 16, -62, 8, 13, -2, -12, -63, -68, -11; M0=-15; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Y'; M= 8, -20, -77, -5, 14, -31, 2, -2, -24, -3, 4, -25, -71, -11, -22, -26, -15, -3, 13, 35; M0=-15; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='L'; M= -89, -82,-113,-106, 14, -41, -96, -1,-105, 30, 12,-109,-100, -91, -99,-106, -87, -30, -7, -83; M0=-64; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= 2, -59, -37, 2, -22, -22, -22, 18, -7, -2, -5, -24, -66, -2, 4, -18, 3, 19, 4, -13; M0=-10; /I: MM=0; MI=-132; MD=-79; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M= 6, -66, 2, 8, -35, -2, -9, -28, 13, -25, -11, 10, -33, 8, 1, 12, 1, -40, -68, -62; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-15; DD=-6; /M: SY='R'; M= 2, -1, -10, 4, -3, -7, 5, -37, 13, -8, -5, 10, -26, 14, 14, -7, -8, -11, -68, -11; M0=-5; /I: MM=-16; MI=-132; MD=-6; IM=-9; II=-11; DM=-15; DD=-6; /M: SY='Y'; M= -9, -6, -8, -6, 18, 16, 11, -22, 1, -7, -41, -8, -21, -4, -34, -2, -11, -24, -52, 23; M0=-8; /I: MM=-2; MI=-32; MD=-126; IM=-18; II=-5; DM=0; DD=-69; /M: SY='G'; M= -36, -66, -8, -19, -70, 34, -48, -23, 0, -12, -57, -7, -16, -16, -14, -21, -21, -18, -68, -28; M0=-19; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-4; DD=-21; /M: SY='V'; M= -8, -53, -29, -72, -3, -25, -59, 23, -23, 1, 5, -24, -17, -24, -27, -14, -15, 26, -58, -14; M0=-16; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 7, -67, 19, 2, -32, -22, -13, -29, -2, -11, -57, 6, 21, -10, -19, 8, -6, -29, -68, -62; M0=-11; /I: MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= 15, -66, -8, 7, -17, -1, -14, -40, 0, -25, -26, -7, 19, 4, -2, 6, -7, -18, -68, -20; M0=-8; /I: MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-4; DD=-21; /M: SY='D'; M= -1, -67, 16, 7, -32, 0, -15, -22, 3, -17, -57, 14, -62, 6, 3, 11, -9, -11, -68, -14; M0=-9; /I: MM=0; MI=-132; MD=-80; IM=-9; II=-11; DM=-4; DD=-21; /M: SY='R'; M= -13, -21, -16, -16, -23, -24, -9, -16, 6, -11, -6, 3, -33, 18, 31, -24, -8, -18, -16, -61; M0=-12; /I: MM=0; MI=-132; MD=-81; IM=-9; II=-11; DM=-4; DD=-21; /M: SY='I'; M= -25, -53, -78, -38, 14, -38, -59, 26, -28, 17, 12, -67, -71, -31, -66, -61, -28, 8, -8, -28; M0=-29; /I: MM=0; MI=-132; MD=-65; IM=-9; II=-11; DM=-4; DD=-21; /M: SY='T'; M= -2, -21, -14, 5, -8, -17, 1, -1, 2, -12, 0, -10, -62, 2, 5, 13, 14, -1, -68, 4; M0=-6; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-15; /M: SY='T'; M= 16, -55, -35, -22, -8, -29, -24, 8, -26, -5, -25, -35, -14, -17, -33, -1, 17, 17, -6, -10; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-4; DD=-22; /M: SY='V'; M= 2, -66, -1, 5, -10, -39, -9, 8, 8, -14, -23, -6, -63, 9, 11, -8, -12, 17, -68, -15; M0=-9; /I: MM=0; MI=-132; MD=-70; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M= 5, -61, -55, -21, -17, 31, -24, -34, -25, -60, -52, -52, -34, -28, -33, 12, -27, -24, 7, -4; M0=-23; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-3; DD=-26; /M: SY='Y'; M= -1, -21, -24, -16, 15, -15, 5, -66, 9, 0, 11, -18, -25, -20, 4, -35, -17, -7, -68, 33; M0=-12; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M= -5, -19, -78, -29, -31, 36, -59, -24, -68, -52, -45, -34, -36, -64, -66, -10, -25, -26, -6, -20; M0=-32; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 3, -23, 14, 25, -35, -9, -48, -18, 8, -26, -24, -29, -21, -7, -19, 4, -20, -24, -68, 3; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='S'; M= 1, -19, 4, 5, 0, -15, -14, -37, -8, -7, -25, -1, -33, 2, 0, 16, 14, -12, -68, 1; M0=-6; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -11, -19, 9, 8, -32, -24, 8, -27, 9, -13, 4, 5, -33, 20, 15, -13, -9, -15, -14, 4; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= -11, -66, -51, -32, -17, -24, -48, -66, -16, -11, -23, -14, 39, -9, -9, -11, -21, -62, -68, -14; M0=-23; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= 0, -54, -21, -29, -7, -24, -57, 22, -7, 10, -3, -23, -16, -23, -4, -30, -17, 19, -59, -18; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 22, 11, 3, -10, 0, -11, -9, -17, -8, -17, -11, -3, -25, -16, -19, -4, 0, 11, -68, -6; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= -5, -11, 19, -10, -70, -9, -15, -27, -15, -9, -27, 3, 17, -8, -8, 12, 7, -10, -68, -5; M0=-8; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='N'; M= -1, 1, -4, 1, -22, 3, -13, -35, -11, -29, -26, 35, -6, -3, -23, -18, -4, -29, -15, -19; M0=-11; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='D'; M= 7, -12, 17, 1, -32, -8, 11, -28, 6, -17, -25, 11, -6, -1, -11, 1, 6, -12, -15, -10; M0=-5; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='T'; M= -10, 1, 6, -4, -13, -15, -24, -23, -10, -20, -25, 0, -10, -6, -18, 14, 27, -29, -6, -29; M0=-9; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 13, -67, 7, 17, -23, -11, -22, -4, 1, -20, -23, -5, 14, -10, 2, -3, -25, -15, -6, -18; M0=-7; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= 13, -67, 5, 21, -70, -25, -14, -15, -21, -16, -57, 4, -3, 8, -6, -1, -1, -10, -7, -14; M0=-10; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='G'; M= 5, 3, -7, -4, -32, 27, -6, -67, -8, -28, -24, 7, -12, -4, 3, -7, -27, -8, -68, -20; M0=-12; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -8, -23, -9, -5, -15, -37, -5, -14, 2, -33, -6, 5, -16, -7, 32, -11, -51, -5, 18, -4; M0=-12; /I: MM=0; MI=-132; MD=-143; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='A'; M= 22, -67, -14, 3, -10, -17, -9, -18, -1, -18, -15, 3, -12, 9, 6, 5, -22, -6, -16, -19; M0=-7; /I: MM=0; MI=-132; MD=-57; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='Q'; M= -3, 7, -8, 0, -7, -36, -23, -4, 18, -1, 6, -11, -36, 19, 14, -20, -17, -10, -15, -11; M0=-7; /I: MM=-4; MI=-21; MD=-142; IM=-23; II=-3; DM=-1; DD=-35; /M: SY='N'; M= -20, -65, 7, -10, -68, -38, -49, -22, -45, -33, -15, 41, -63, -27, -24, -17, -33, -19, -68, -61; M0=-28; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -24, -59, -57, -27, -31, -65, -52, -25, -16, -39, -14, -23, -35, -7, 40, -36, -21, -15, -63, -28; M0=-28; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -21, -77, -65, -21, -82, -37, -56, -27, -16, -76, -68, -33, -73, -8, 41, -29, -63, -28, -76, -28; M0=-39; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= -6, -21, -39, -74, -15, -18, -61, 13, -37, -53, -47, -68, -72, -66, -68, -25, -9, 34, -60, -56; M0=-34; /I: MM=0; MI=-132; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= -21, -66, 14, 32, -33, -38, -24, -21, -15, -23, -24, -14, -62, -27, -24, -7, -5, 3, -68, -29; M0=-18; /I: MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -4, -52, -78, -71, 17, -38, -58, 30, -35, 2, -9, -66, -35, -31, -65, -29, -11, 14, -57, -17; M0=-26; /I: MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='V'; M= -15, -20, -11, 4, 4, -63, -4, 8, 2, 0, 2, -14, -32, 1, 3, -5, 9, 13, 0, 3; M0=-6; /I: MM=0; MI=-131; MD=-142; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='I'; M= -10, -5, -35, -71, 12, -29, -58, 23, -18, 11, -2, -32, -26, -29, -21, -17, -21, 17, 7, 1; M0=-15; /I: MM=0; MI=-131; MD=-141; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='K'; M= -4, -22, -15, -6, -7, -15, -9, 7, 10, 2, 2, 1, 3, 2, 4, -5, 5, 4, -67, 3; M0=-2; /I: MM=0; MI=-130; MD=-140; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='P'; M= -1, -10, -6, 2, -11, 5, -46, -10, 6, -13, -6, 5, 15, 3, 7, 1, 2, -7, -66, -18; M0=-3; /I: MM=0; MI=-128; MD=-139; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='R'; M= -2, -63, 7, 4, -3, -2, -18, -3, 7, -10, -11, 6, 2, 7, 12, -5, 2, -10, -65, -9; M0=-3; /I: MM=0; MI=-126; MD=-136; IM=-9; II=-11; DM=-7; DD=-14; /M: SY='E'; M= -3, -14, -2, 12, -29, -7, -1, -16, 6, -14, -20, 7, 7, 10, -1, 6, 0, -1, -62, -15; M0=-4; /I: B0=*; E1=-10;» more |
Numerical results [info]
| Total number of hits | 82 in 82 different sequences |
| Number of true positive hits | 82 in 82 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | OmpA-like |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
82 sequences
ARFA_MYCBO (P65594), ARFA_MYCBP (A1KH31), ARFA_MYCTO (P9WIU4), ARFA_MYCTU (P9WIU5), LAFU_ECO44 (D3GSC3), LAFU_ECOLI (Q47154), LAFU_VIBPA (Q03478), MOTB_BACSU (P28612), MOTB_ECO57 (P0AF07), MOTB_ECOLI (P0AF06), MOTB_HELPJ (Q9ZL29), MOTB_HELPY (P56427), MOTB_SALTY (P55892), MOTB_TREPA (O07887), MOTY_VIBAN (Q9S3P9), MOTY_VIBPA (P46233), OMP38_ACIB2 (Q6RYW5), OMP38_ACIBT (A3M8K2), OMP38_ACIS5 (A0A160PAH3), OMP3_NEIGO (P07050), OMP40_PORGI (Q9S3R8), OMP41_PORGI (Q9S3R9), OMP4_NEIMA (P0A0V2), OMP4_NEIMB (P0A0V3), OMP52_HAEIF (P38368), OMP53_HAEIF (P45996), OMP5_HAEIN (P43840), OMPA_ATLHE (P24754), OMPA_BORAV (Q05146), OMPA_BUCAI (P57414), OMPA_BUCAP (Q8K9L4), OMPA_CITFR (P24016), OMPA_ECO57 (P0A911), OMPA_ECOLI (P0A910), OMPA_ESCF3 (B7LNW7), OMPA_ESCFE (P0C8Z2), OMPA_KLEAE (P09146), OMPA_KLEPN (P24017), OMPA_SALTI (Q8Z7S0), OMPA_SALTY (P02936), OMPA_SERMA (P04845), OMPA_SEROD (P24755), OMPA_SHIBC (I2BAK7), OMPA_SHIBL (P0DJO6), OMPA_SHIDY (P02935), OMPA_SHIFL (A0A2S4N3N0), OMPA_YERPE (Q8ZG77), OMPA_YERPS (P38399), OMPC_GLUDA (P84838), PAL_AGRFC (Q8U9L5), PAL_BRUAB (P0A3S9), PAL_BRUME (P0A3S7), PAL_BRUSU (P0A3S8), PAL_BUCBP (Q89AJ5), PAL_ECO57 (P0A913), PAL_ECOLI (P0A912), PAL_HAEIN (P10324), PAL_LEGPN (P26493), PAL_PASMU (Q51886), PAL_PSEAE (Q9I4Z4), PAL_PSEPK (P0A138), PAL_PSEPU (P0A139), PAL_RHILO (Q98F85), PAL_RHIME (Q926C3), PAL_SHIFL (P0A914), PORF_PSEAE (P13794), PORF_PSEFL (P37726), PORF_PSESY (P22263), PSAB_GLOVI (Q7NFT5), TPGA_ACIS5 (A0A160PB22), TPN50_TREPA (P38369), YFIB_ECOLI (P07021), YFIB_PSEAE (Q9I4L6), YIAD_ECOLI (P37665), YN58_BRUAB (P0C536), YP57_BRUA2 (Q2YJ83), YTXE_BACSU (P39064), YTXE_PRIMG (P46827), YU36_BRUME (Q8YDY8), YU58_BRUSU (Q9RPX3), ZORB_ECO24 (A7ZI09), ZORB_ECOLC (P0DW02)» more
|
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
OMP5_GLAPU (P85410), OMPA_ACTLI (P80444) |
| PDB [Detailed view] |
51 PDB
1OAP; 1R1M; 2AIZ; 2HQS; 2K1S; 2KGW; 2L26; 2LBT; 2LCA; 2MQE; 2N48; 2W8B; 2ZOV; 2ZVY; 2ZVZ; 3CYP; 3CYQ; 3IMP; 3NB3; 3S02; 3S03; 3S06; 3S0H; 3S0W; 3S0Y; 3TD3; 3TD4; 3TD5; 4G4Y; 4G4Z; 4G88; 4ZHV; 4ZHW; 4ZHY; 5EAZ; 5EB0; 5EB1; 5NHX; 5U1H; 5Y3Z; 5Y40; 5Y61; 6IKI; 6IKJ; 6IKK; 6YSL; 7F4V; 8QYD; 8QYH; 8QYK; 8QYY » more |