PROSITE entry PS60009
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CYCLOTIDE_MOEBIUS |
| Accession [info] | PS60009 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2004 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51052 |
Name and characterization of the entry
| Description [info] | Cyclotides Moebius subfamily signature. |
| Pattern [info] |
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C. |
Numerical results [info]
| Total number of hits | 64 in 58 different sequences |
| Number of true positive hits | 64 in 58 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 16 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 3 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 5 |
| Site [info] | disulfide at position 10 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
58 sequences
CYC18_CLITE (C0HJS5), CYC3_CLITE (C0HKG1), CYCM_CLITE (P86899), CYCN_CLITE (P86900), CYH3_VIOHE (P85232), CYMBA_MELOB (C0HKJ7), CYMC2_MELCT (C0HK36), CYMC3_MELCT (C0HK37), CYMC7_MELCT (C0HK41), CYMEA_MELDN (C0HKI4), CYMEB_MELDN (C0HKI5), CYMNA_MELAG (C0HKI3), CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYPLA_PSYBR (C0HL24), CYPLA_PSYLE (C0HL27), CYPLB_PSYBR (C0HL25), CYPLB_PSYLE (C0HL28), CYPLC_PSYLE (C0HL29), CYPLD_PSYBR (C0HL26), CYPLD_PSYLE (C0HL30), CYPLE_PSYLE (C0HL31), CYVA_VIOBI (P85239), CYVB_VIOBI (P85240), CYVNA_VIOIN (C0HKK1), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF (P56254), KAB2_OLDAF (P58454), KAB3_OLDAF (P58455), KAB4_OLDAF (P83938), KAB7_OLDAF (P58457), KAB9_OLDAF (P85127), KABS_OLDAF (P58458), TRIC_VIOAR (P0C589), VARA_VIOAR (P58446), VARA_VIOBI (P85525), VARA_VIOOD (Q5USN7), VARB_VIOAR (P58447), VARC_VIOAR (P58448), VARD_VIOAR (P58449), VARF_VIOAR (P58451), VARG_VIOAR (P58452), VARH_VIOAR (P58453), VHL2_VIOHE (P85231), VODM_VIOOD (P83839), VODN_VIOOD (P83838)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
16 sequences
CYC15_CLITE (C0HJS2), CYC19_CLITE (C0HJS6), CYC20_CLITE (C0HJS7), CYGPC_GLOPU (C0HL37), CYML1_MELLF (C0HK28), CYML2_MELLF (C0HK29), CYML3_MELLF (C0HK30), CYML4_MELLF (C0HK31), CYML5_MELLF (C0HK32), CYML6_MELLF (C0HK33), CYML7_MELLF (C0HK34), CYO14_VIOOD (P85177), CYVC_VIOBI (P85241), CYVD_VIOBI (P85242), KAB12_OLDAF (P85130), VIOLA_VIOOD (Q2HY54)» more |
| PDB [Detailed view] |
28 PDB
1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JUE; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO; 7LHC; 7RFA; 8TYI » more |