ProRule PRU00309
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00309
General rule information
[?]
| Accession | PRU00309 |
| Dates | 14-JAN-2004 (Created)
21-NOV-2019 (Last updated, Version ) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50950; THAP |
Name | Zinc finger THAP-type |
| Function | The THAP-type zinc finger is supposed to be a DNA-binding domain. |
| Scope(s) |
Eukaryota Metazoa |
| Example(s) | Q9NVV9; |
Propagated annotation
[?]
Keywords
[?]
| Zinc-finger | |
| DNA-binding | |
| case <Feature:PS50950:5=[CH]> and <Feature:PS50950:10=[CH]> and <Feature:PS50950:55=[CH]> and <Feature:PS50950:58=[CH]> | |
| Zinc | |
| Metal-binding | |
| end case | |
Gene Ontology
[?]
| GO:0003677; Molecular function:DNA binding | |
| case <Feature:PS50950:5=[CH]> and <Feature:PS50950:10=[CH]> and <Feature:PS50950:55=[CH]> and <Feature:PS50950:58=[CH]> | |
| GO:0046872; Molecular function:metal ion binding | |
| GO:0008270; Molecular function:zinc ion binding | |
| end case | |
Features
[?]
| From: PS50950 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case <Feature:PS50950:5=C> and <Feature:PS50950:10=C> and <Feature:PS50950:55=C> and <Feature:PS50950:58=H> | ||||||||||||
| ZN_FING | 5 | 58 | /note="THAP-type #" | |||||||||
| else case <Feature:PS50950:5=[CH]> and <Feature:PS50950:10=[CH]> and <Feature:PS50950:55=[CH]> and <Feature:PS50950:58=[CH]> | ||||||||||||
| ZN_FING | 5 | 58 | /note="THAP-type #; atypical" | |||||||||
| else | ||||||||||||
| ZN_FING | 5 | 58 | /note="THAP-type #; degenerate" | |||||||||
| end case | ||||||||||||
Additional information
[?]
| Size range | 70-100 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1-27 |
| Topology | Cytoplasmic |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
[?]
- UniProtKB/Swiss-Prot sets
Eukaryota [47] All [ 47 ]
- Retrieve set of proteins with 3D structure for this domain