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PRU00470


General rule information [?]

Accession PRU00470
Dates 10-AUG-2005 (Created)
19-NOV-2022 (Last updated, Version 9)
Data class Domain
Predictors PROSITE; PS51141; ZF_SBP
Name Zinc finger SBP-type
Function DNA-binding

Propagated annotation [?]


Keywords [?]

Zinc-finger
case (<Feature:PS51141:4=[CH]> and <Feature:PS51141:9=[CH]> and <Feature:PS51141:26=[CH]> and <Feature:PS51141:29=[CH]>) or (<Feature:PS51141:45=[CH]> and <Feature:PS51141:48=[CH]> and <Feature:PS51141:52=[CH]> and <Feature:PS51141:64=[CH]>)
Zinc
Metal-binding
end case


Features [?]

case (<Feature:PS51141:4=[C]> and <Feature:PS51141:9=[C]> and <Feature:PS51141:26=[C]> and <Feature:PS51141:29=[H]>) and (<Feature:PS51141:45=[C]> and <Feature:PS51141:48=[C]> and <Feature:PS51141:52=[H]> and <Feature:PS51141:64=[C]>)
From: PS51141
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       SBP-type #        
else case (<Feature:PS51141:4=[CH]> and <Feature:PS51141:9=[CH]> and <Feature:PS51141:26=[CH]> and <Feature:PS51141:29=[CH]>) and (<Feature:PS51141:45=[CH]> and <Feature:PS51141:48=[CH]> and <Feature:PS51141:52=[CH]> and <Feature:PS51141:64=[CH]>)
ZN_FING     from     to       SBP-type #; atypical        
else
ZN_FING     from     to       SBP-type #; degenerate        
end case

BINDING     4     4       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     9     9       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     26     26       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     29     29       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     45     45       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     48     48       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     52     52       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     64     64       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2

Additional information [?]

Size range 76-77 amino acids
Related rules None
Repeats 1
Topology Undefined
Example Q8LFW6 (SPL13_ARATH)
Scope
Eukaryota; Embryophyta

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


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UniProtKB rule member sequences [?]