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PRU00502


General rule information [?]

Accession PRU00502
Dates 23-NOV-2005 (Created)
19-NOV-2022 (Last updated, Version 6)
Data class Domain
Predictors PROSITE; PS50271; ZF_UBP
Name UBP-type zinc finger
Function ubiquitin binding domain

Propagated annotation [?]


Gene Ontology [?]

case (<Feature:PS50271:3=[CH]> and <Feature:PS50271:5=[HC]> and <Feature:PS50271:76=[CH]> and <Feature:PS50271:79=[CH]>) or (<Feature:PS50271:25=[CH]> and <Feature:PS50271:28=[CH]> and <Feature:PS50271:46=[CH]> and <Feature:PS50271:53=[HC]>) or (<Feature:PS50271:38=[CH]> and <Feature:PS50271:41=[CH]> and <Feature:PS50271:57=[HC]> and <Feature:PS50271:63=[HC]>)
GO:0046872; Molecular function: metal ion binding.

Keywords [?]

Metal-binding
Zinc
end case

Zinc-finger

Features [?]

case (<Feature:PS50271:3=C> and <Feature:PS50271:5=H> and <Feature:PS50271:76=C> and <Feature:PS50271:79=C>) and (<Feature:PS50271:25=C> and <Feature:PS50271:28=C> and <Feature:PS50271:46=C> and <Feature:PS50271:53=H>) and (<Feature:PS50271:38=C> and <Feature:PS50271:41=C> and <Feature:PS50271:57=H> and <Feature:PS50271:63=H>)
From: PS50271
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       UBP-type #        
else case (<Feature:PS50271:3=[CH]> and <Feature:PS50271:5=[HC]> and <Feature:PS50271:76=[CH]> and <Feature:PS50271:79=[CH]>) and (<Feature:PS50271:25=[CH]> and <Feature:PS50271:28=[CH]> and <Feature:PS50271:46=[CH]> and <Feature:PS50271:53=[HC]>) and (<Feature:PS50271:38=[CH]> and <Feature:PS50271:41=[CH]> and <Feature:PS50271:57=[HC]> and <Feature:PS50271:63=[HC]>)
ZN_FING     from     to       UBP-type #; atypical        
else
ZN_FING     from     to       UBP-type #; degenerate        
end case

BINDING     3     3       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     5     5       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     25     25       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     28     28       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     38     38       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     41     41       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     46     46       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     53     53       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     57     57       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     63     63       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     76     76       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     79     79       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1

Additional information [?]

Size range 59-76 amino acids
Related rules None
Repeats 1-2
Topology Undefined
Example Q5DU02 (UBP22_MOUSE)
Scope
Eukaryota

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


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UniProtKB rule member sequences [?]