We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU00538
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00538
General rule information
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| Accession | PRU00538 |
| Dates | 16-MAR-2006 (Created)
19-NOV-2022 (Last updated, Version 8) |
| Data class | Domain; |
| Predictors |
PROSITE; PS51184; JMJC |
Name | JmjC domain |
| Function | the JmjC domain is found in organisms from bacteria to human and has been shown to function in a histone demethylation mechanism that is conserved from yeast to human. |
| Scope(s) |
Eukaryota Bacteria Viruses |
| Example(s) | Q9Y4C1; |
Propagated annotation
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Keywords
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| case <FTGroup:1> | |
| Iron | |
| Metal-binding | |
| end case | |
Gene Ontology
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| case <FTGroup:1> | |
| GO:0046872; Molecular function:metal ion binding | |
| end case | |
Features
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| From: PS51184 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="JmjC #" | |||||||||
| BINDING | 47 | 47 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" /ligand_note="catalytic" |
H | 1 | |||||||
| BINDING | 49 | 49 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" /ligand_note="catalytic" |
[DE] | 1 | |||||||
| BINDING | 129 | 129 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" /ligand_note="catalytic" |
[HY] | 1 | |||||||
Additional information
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| Size range | 120-230 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Bacteria [3] Eukaryota [216] Viruses [1] All [ 220 ]
- Retrieve set of proteins with 3D structure for this domain