General rule information
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Accession |
PRU01146 |
Dates |
6-JUL-2016 (Created) 22-NOV-2019 (Last updated, Version 3) |
Name |
Extended PHD (ePHD) domain |
Function |
The extended plant homeodomain (ePHD) domain contains an N-terminal pre-PHD (C2HC zinc finger), a long linker, and a noncanonical PHD finger (C4HC3 zinc finger). The ePHD domain can bind dsDNA but not histones. |
Propagated annotation
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case (<Feature:PS51805:4=[CH]> and <Feature:PS51805:7=[CH]> and <Feature:PS51805:27=[CH]> and <Feature:PS51805:30=[CH]>) or (<Feature:PS51805:63=[CH]> and <Feature:PS51805:66=[CH]> and <Feature:PS51805:85=[CH]> and <Feature:PS51805:88=[CH]>) or (<Feature:PS51805:75=[CH]> and <Feature:PS51805:80=[CH]> and <Feature:PS51805:109=[CH]> and <Feature:PS51805:112=[CH]>)
GO:0008270; Molecular function: zinc ion binding.
GO:0046872; Molecular function: metal ion binding.
end case
case <Feature:PS51805:4=C> and <Feature:PS51805:7=C> and <Feature:PS51805:27=H> and <Feature:PS51805:30=C>
From: PS51805 |
Key
|
|
From
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|
To
|
|
Description
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|
Tag
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|
Condition
|
|
FTGroup
|
ZN_FING
|
|
from
|
|
37
|
|
C2HC pre-PHD-type #
|
|
|
|
|
|
|
else case <Feature:PS51805:4=[CH]> and <Feature:PS51805:7=[CH]> and <Feature:PS51805:27=[CH]> and <Feature:PS51805:30=[CH]>
ZN_FING
|
|
from
|
|
37
|
|
C2HC pre-PHD-type #; atypical
|
|
|
|
|
|
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else
ZN_FING
|
|
from
|
|
37
|
|
C2HC pre-PHD-type #; degenerate
|
|
|
|
|
|
|
end case
case (<Feature:PS51805:63=[C]> and <Feature:PS51805:66=[C]> and <Feature:PS51805:85=[H]> and <Feature:PS51805:88=[C]>) and (<Feature:PS51805:75=[C]> and <Feature:PS51805:80=[C]> and <Feature:PS51805:109=[C]> and <Feature:PS51805:112=[H]>)
else case (<Feature:PS51805:63=[CH]> and <Feature:PS51805:66=[CH]> and <Feature:PS51805:85=[CH]> and <Feature:PS51805:88=[CH]>) and (<Feature:PS51805:75=[CH]> and <Feature:PS51805:80=[CH]> and <Feature:PS51805:109=[CH]> and <Feature:PS51805:112=[CH]>)
ZN_FING
|
|
61
|
|
to
|
|
PHD-type #; atypical
|
|
|
|
|
|
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else
ZN_FING
|
|
61
|
|
to
|
|
PHD-type #; degenerate
|
|
|
|
|
|
|
end case
case not <AnyFeature:PS50016~1,10~PS51805>
REGION
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from
|
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to
|
|
Extended PHD# domain (ePHD#)
|
|
|
|
|
|
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end case
Additional information
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Size range |
95-155 amino acids |
Related rules |
None |
Repeats |
1-2 |
Topology |
Undefined |
Example |
P20659 (TRX_DROME) |
Scope |
Eukaryota |
Comments |
None |
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distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives
(CC BY-NC-ND 4.0) License, see
prosite_license.html.
UniProtKB rule member sequences
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