Entry: PS00989

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General information about the entry

Entry name [info] CLAT_ADAPTOR_S
Accession [info] PS00989
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2001 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00760

Name and characterization of the entry

Description [info] Clathrin adaptor complexes small chain signature.
Pattern [info]
[LIVMC]-[LIVM]-Y-[KR]-x(4)-L-Y-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 92.11 %
Recall (true positives / (true positives + false negatives)) 61.40 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

AP1S1_ARATH (Q8LEZ8), AP1S1_BOVIN (Q1JQ98), AP1S1_HUMAN (P61966), 
AP1S1_MOUSE (P61967), AP1S1_YEAST (P35181), AP1S2_ARATH (O23685), 
AP1S2_BOVIN (Q3ZBS3), AP1S2_HUMAN (P56377), AP1S2_MOUSE (Q9DB50), 
AP1S3_HUMAN (Q96PC3), AP1S3_MOUSE (Q7TN05), AP2S1_BOVIN (Q17QC5), 
AP2S1_HUMAN (P53680), AP2S1_MOUSE (P62743), AP2S1_PONAB (Q5R940), 
AP2S1_RAT   (P62744), AP2S_SCHPO  (Q9Y7L6), AP2S_YEAST  (Q00381), 
AP3S1_BOVIN (Q2YDH6), AP3S1_HUMAN (Q92572), AP3S1_MOUSE (Q9DCR2), 
AP3S2_BOVIN (Q1JQA3), AP3S2_HUMAN (P59780), AP3S2_MOUSE (Q8BSZ2), 
AP3S2_PONAB (Q5RDP9), AP3S_ARATH  (Q8VZ37), AP3S_ASHGO  (Q75F71), 
AP3S_SCHPO  (Q09905), AP3S_YEAST  (P47064), APS3_CANAL  (Q59QC5), 
COPZ1_BOVIN (P35604), COPZ1_HUMAN (P61923), COPZ1_MOUSE (P61924), 
COPZ1_PONAB (Q5R5F2), COPZ_CAEEL  (O17901)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

AP1S1_SCHPO (Q9P7N2), AP2S_ASPFU  (Q4WS49), AP2S_EMENI  (Q5BFF8), 
AP2S_GIBZE  (Q4ICG5), AP2S_NEUCR  (Q7SAQ1), AP4S1_BOVIN (Q3ZBB6), 
AP4S1_HUMAN (Q9Y587), AP4S1_MOUSE (Q9WVL1), AP4S_ARATH  (O82201), 
COPZ1_ARATH (Q940S5), COPZ1_ORYSJ (Q9MAX5), COPZ2_ARATH (Q84LG4), 
COPZ2_HUMAN (Q9P299), COPZ2_MOUSE (Q9JHH9), COPZ2_ORYSJ (Q6Z844), 
COPZ3_ARATH (Q8H1F4), COPZ3_ORYSJ (Q5NA06), COPZA_DICDI (Q54HD4), 
COPZB_DICDI (Q54CA7), COPZ_ENCCU  (Q8SRD1), COPZ_SCHPO  (O74891), 
COPZ_YEAST  (P53600)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

SYC_LEPIN   (Q8F525), SYI_BLOFL   (Q7VQL0), TSAD_BUCCC  (Q058D1)

		
PDB
[Detailed view]
9 PDB

1W63; 2HF6; 2JKR; 2JKT; 2VGL; 2XA7; 3TJZ; 4HMY; 4NEE

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