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Entry: PS00989

General information about the entry

Entry name [info] CLAT_ADAPTOR_S
Accession [info] PS00989
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-DEC-2001 DATA UPDATE; 20-DEC-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00760

Name and characterization of the entry

Description [info] Clathrin adaptor complexes small chain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_12 which contains 556'388 sequence entries.

Total number of hits 38 in 38 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 92.11 %
Recall (true positives / (true positives + false negatives)) 61.40 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
35 sequences

AP1S1_ARATH (Q8LEZ8    ), AP1S1_BOVIN (Q1JQ98    ), AP1S1_HUMAN (P61966    ), 
AP1S1_MOUSE (P61967    ), AP1S1_YEAST (P35181    ), AP1S2_ARATH (O23685    ), 
AP1S2_BOVIN (Q3ZBS3    ), AP1S2_HUMAN (P56377    ), AP1S2_MOUSE (Q9DB50    ), 
AP1S3_HUMAN (Q96PC3    ), AP1S3_MOUSE (Q7TN05    ), AP2S1_BOVIN (Q17QC5    ), 
AP2S1_HUMAN (P53680    ), AP2S1_MOUSE (P62743    ), AP2S1_PONAB (Q5R940    ), 
AP2S1_RAT   (P62744    ), AP2S_SCHPO  (Q9Y7L6    ), AP2S_YEAST  (Q00381    ), 
AP3S1_BOVIN (Q2YDH6    ), AP3S1_HUMAN (Q92572    ), AP3S1_MOUSE (Q9DCR2    ), 
AP3S2_BOVIN (Q1JQA3    ), AP3S2_HUMAN (P59780    ), AP3S2_MOUSE (Q8BSZ2    ), 
AP3S2_PONAB (Q5RDP9    ), AP3S_ARATH  (Q8VZ37    ), AP3S_ASHGO  (Q75F71    ), 
AP3S_SCHPO  (Q09905    ), AP3S_YEAST  (P47064    ), APS3_CANAL  (Q59QC5    ), 
COPZ1_BOVIN (P35604    ), COPZ1_HUMAN (P61923    ), COPZ1_MOUSE (P61924    ), 
COPZ1_PONAB (Q5R5F2    ), COPZ_CAEEL  (O17901    )
» more

False negative sequences
22 sequences

AP1S1_SCHPO (Q9P7N2    ), AP2S_ASPFU  (Q4WS49    ), AP2S_EMENI  (Q5BFF8    ), 
AP2S_GIBZE  (Q4ICG5    ), AP2S_NEUCR  (Q7SAQ1    ), AP4S1_BOVIN (Q3ZBB6    ), 
AP4S1_HUMAN (Q9Y587    ), AP4S1_MOUSE (Q9WVL1    ), AP4S_ARATH  (O82201    ), 
COPZ1_ARATH (Q940S5    ), COPZ1_ORYSJ (Q9MAX5    ), COPZ2_ARATH (Q84LG4    ), 
COPZ2_HUMAN (Q9P299    ), COPZ2_MOUSE (Q9JHH9    ), COPZ2_ORYSJ (Q6Z844    ), 
COPZ3_ARATH (Q8H1F4    ), COPZ3_ORYSJ (Q5NA06    ), COPZA_DICDI (Q54HD4    ), 
COPZB_DICDI (Q54CA7    ), COPZ_ENCCU  (Q8SRD1    ), COPZ_SCHPO  (O74891    ), 
COPZ_YEAST  (P53600    )
» more

False positive sequences
3 sequences

SYC_LEPIN   (Q8F525    ), SYI_BLOFL   (Q7VQL0    ), TSAD_BUCCC  (Q058D1    )

[Detailed view]
22 PDB

1W63; 2HF6; 2JKR; 2JKT; 2VGL; 2XA7; 3TJZ; 4HMY; 4NEE; 4P6Z; 4UQI; 5A1U; 5A1V; 5A1W; 5A1X; 5A1Y; 5MC7; 5NZR; 5NZS; 5NZT; 5NZU; 5NZV
» more

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