Entry: PS01144

General information about the entry

Entry name [info] RIBOSOMAL_L31E
Accession [info] PS01144
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00881

Name and characterization of the entry

Description [info] Ribosomal protein L31e signature.
Pattern [info]
[VI]-[KRWVI]-[LIV]-[DSAG]-x(2)-[LIV]-[NS]-x-[AKQEHFYLCT]-x-W-x-[KRQE]-
[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 66 in 66 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 19
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 77.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
66 sequences

RL311_ARATH (Q9SLL7    ), RL312_ARATH (Q9STR1    ), RL313_ARATH (P51420    ), 
RL31A_YEAST (P0C2H8    ), RL31B_YEAST (P0C2H9    ), RL31_AEDAE  (Q9GN74    ), 
RL31_AERPE  (Q9YD25    ), RL31_ARCFU  (O28213    ), RL31_ASHGO  (Q757D7    ), 
RL31_BOVIN  (Q56JX3    ), RL31_CAEEL  (Q9U332    ), RL31_CANGA  (Q6FWF4    ), 
RL31_CHLRE  (P45841    ), RL31_CYAPA  (Q9XGL4    ), RL31_DICDI  (Q54XB5    ), 
RL31_DROME  (Q9V597    ), RL31_DROVI  (O18602    ), RL31_HALMA  (P18138    ), 
RL31_HALS3  (B0R7X8    ), RL31_HALSA  (Q9HMN0    ), RL31_HALWD  (Q18EU7    ), 
RL31_HELVI  (Q9GP16    ), RL31_HUMAN  (P62899    ), RL31_ICTPU  (Q90YT7    ), 
RL31_MARMO  (Q1KSC7    ), RL31_META3  (A6UT96    ), RL31_METAC  (Q8TIN3    ), 
RL31_METB6  (A7I9I7    ), RL31_METHJ  (Q2FS98    ), RL31_METJA  (P54009    ), 
RL31_METKA  (Q8TUY4    ), RL31_METLZ  (A2STI8    ), RL31_METM5  (A4G0C8    ), 
RL31_METM6  (A9A8N0    ), RL31_METM7  (A6VI49    ), RL31_METMA  (Q8PYQ4    ), 
RL31_METMP  (Q6M155    ), RL31_METPE  (B8GEU5    ), RL31_METTH  (O27649    ), 
RL31_METVS  (A6UR55    ), RL31_MOUSE  (P62900    ), RL31_NATPD  (Q3ITD6    ), 
RL31_NICGU  (P46290    ), RL31_PANGI  (Q9MAV7    ), RL31_PAROL  (Q9IA76    ), 
RL31_PERFR  (Q9M573    ), RL31_PICMA  (O65071    ), RL31_PICTO  (Q6L2L1    ), 
RL31_PIG    (P62901    ), RL31_PONAB  (Q5RBR9    ), RL31_PYRAB  (Q9UYI7    ), 
RL31_PYRAE  (Q8ZTU2    ), RL31_PYRCJ  (A3MX75    ), RL31_PYRFU  (Q8U3S7    ), 
RL31_PYRHO  (P58189    ), RL31_PYRIL  (A1RRQ3    ), RL31_PYRNV  (B1YAD6    ), 
RL31_RAT    (P62902    ), RL31_SCHPO  (Q9URX6    ), RL31_SPOFR  (Q7KF90    ), 
RL31_STAMF  (A3DNH4    ), RL31_THEAC  (Q9HM17    ), RL31_THEKO  (Q5JGT5    ), 
RL31_THEON  (B6YWY3    ), RL31_THEVO  (Q97CU1    ), RL31_XENLA  (Q6NUH0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
19 sequences

RL31_DESK1  (B8D5Q6    ), RL31_ENCCU  (Q8SSC8    ), RL31_HALLT  (B9LUU9    ), 
RL31_HYPBU  (A2BN56    ), RL31_IGNH4  (A8A968    ), RL31_METAR  (Q0W5H1    ), 
RL31_METMJ  (A3CWZ5    ), RL31_PYRAR  (A4WL96    ), RL31_SULAC  (P38618    ), 
RL31_SULIA  (C3MZB2    ), RL31_SULIK  (C4KIJ0    ), RL31_SULIL  (C3MR77    ), 
RL31_SULIM  (C3MXG6    ), RL31_SULIN  (C3NGA2    ), RL31_SULIY  (C3N7D2    ), 
RL31_SULSO  (P58190    ), RL31_SULTO  (Q971I2    ), RL31_TETTS  (Q22DH9    ), 
RL31_THEGJ  (C5A7H3    )
» more

PDB
[Detailed view]
70 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2WW9; 2WWA; 2WWB; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3OW2; 4ADX
» more

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