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PROSITE documentation PDOC50842

Expansin family profiles





Description

Expansins are secreted proteins of 25 to 27 Kd that were isolated first from young cucumber seedling and subsequently from other plant tissues. Expression of expansin genes correlates with growth of cells. Increase in expansin content also occurs during fruit ripening. Expansins act on the cell wall to promote its extensibility. The model for its mechanism of action postulates that expansins break non-covalent bonds between cell-wall polysaccharides, thereby permitting pressure dependent expansion of the cell [1,2].

Group-I pollen allergens of grasses have limited but significant sequence homology to expansin. These proteins are the main causative agent of hay fever and seasonal asthma induced by grass pollen. Extracts containing group-I allergens are also active in loosening cell-walls. Group-I pollen allergens and related proteins in vegetative tissues have been classified as β-expansins, whereas the earlier discovered expansins are now referred to as α-expansins [3].

Expansin-like proteins are also found in some fungi. In Trichoderma reesei an expansin-like protein (Cel12A) acts as a glycoside hydrolase on xyloglucan and 1-4 β-glucan. These hydrolytic actions differ from the action by expansins, which induce wall extension by a non-hydrolytic mechanism [4].

Expansins consist of two domains closely packed and aligned so as to form a long, shallow groove with potential to bind a glycan backbone of ~10 sugar residues (see <PDB:2HCZ>). The N-terminal cysteine-rich domain has distant sequence similarity to family-45 endoglucanases (EG45-like domain). It has noteworthy, but incomplete, conservation of the catalytic site identified in EG45 enzymes. The ~120-residue EG45-like domain has three disulfide bonds and the six participating cysteines are highly conserved. Its fold is dominated by a six-stranded β-barrel flanked by short loops and α-helices. The ~90-residue C-terminal domain may function as a cellulose-binding domain (CBD). It is composed of eight β-strands assembled into two antiparallel β-sheets. The two β-sheets are at slight angles to each other and form a β-sandwich similar to the Ig fold [5,E1].

Two profiles were developed for this family, the first one picks up the EG45-like domain while the second profile detects the cellulose-binding domain.

Last update:

January 2007 / Text revised.

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Technical section

PROSITE methods (with tools and information) covered by this documentation:

EXPANSIN_CBD, PS50843; Expansin, Cellulose-binding-like domain profile  (MATRIX)

EXPANSIN_EG45, PS50842; Expansin, family-45 endoglucanase-like domain profile  (MATRIX)


References

1AuthorsCosgrove D.J.
TitleLoosening of plant cell walls by expansins.
SourceNature 407:321-326(2000).
PubMed ID11014181
DOI10.1038/35030000

2AuthorsLee Y. Choi D. Kende H.
TitleExpansins: ever-expanding numbers and functions.
SourceCurr. Opin. Plant Biol. 4:527-532(2001).
PubMed ID11641069

3AuthorsCosgrove D.J. Bedinger P. Durachko D.M.
TitleGroup I allergens of grass pollen as cell wall-loosening agents.
SourceProc. Natl. Acad. Sci. U.S.A. 94:6559-6564(1997).
PubMed ID9177257

4AuthorsYuan S. Wu Y. Cosgrove D.J.
TitleA fungal endoglucanase with plant cell wall extension activity.
SourcePlant Physiol. 127:324-333(2001).
PubMed ID11553760

5AuthorsYennawar N.H. Li L.-C. Dudzinski D.M. Tabuchi A. Cosgrove D.J.
TitleCrystal structure and activities of EXPB1 (Zea m 1), a beta-expansin and group-1 pollen allergen from maize.
SourceProc. Natl. Acad. Sci. U.S.A. 103:14664-14671(2006).
PubMed ID16984999
DOI10.1073/pnas.0605979103

E1Sourcehttp://www.personal.psu.edu/fsl/ExpCentral/



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