PROSITE entry PS00046
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General information about the entry
Entry name [info] | HISTONE_H2A |
Accession [info] | PS00046 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00045 |
Name and characterization of the entry
Description [info] | Histone H2A signature. |
Pattern [info] |
[AC]-G-L-x-F-P-V. |
Numerical results [info]
Total number of hits | 233 in 233 different sequences |
Number of true positive hits | 227 in 227 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 6 in 6 different sequences |
Number of false negative sequences | 18 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 97.42 % |
Recall (true positives / (true positives + false negatives)) | 92.65 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
227 sequences
H2A1A_HUMAN (Q96QV6), H2A1B_HUMAN (P04908), H2A1B_MOUSE (C0HKE1), H2A1C_HUMAN (Q93077), H2A1C_MOUSE (C0HKE2), H2A1C_RAT (P0C169), H2A1D_HUMAN (P20671), H2A1D_MOUSE (C0HKE3), H2A1E_MOUSE (C0HKE4), H2A1E_RAT (P0C170), H2A1F_MOUSE (Q8CGP5), H2A1F_RAT (Q64598), H2A1G_MOUSE (C0HKE5), H2A1H_HUMAN (Q96KK5), H2A1H_MOUSE (Q8CGP6), H2A1I_MOUSE (C0HKE6), H2A1J_HUMAN (Q99878), H2A1K_MOUSE (Q8CGP7), H2A1N_MOUSE (C0HKE7), H2A1O_MOUSE (C0HKE8), H2A1P_MOUSE (C0HKE9), H2A1_ARATH (Q9C681), H2A1_BOVIN (P0C0S9), H2A1_CANAL (Q59SU5), H2A1_CANGA (Q6FWM7), H2A1_DEBHA (Q6BKW8), H2A1_EREGS (Q74ZL4), H2A1_HUMAN (P0C0S8), H2A1_LEIIN (P27891), H2A1_LODEL (A5DWF1), H2A1_MEDTR (Q2HU68), H2A1_ORYSI (A2YMC5), H2A1_ORYSJ (Q6ZL43), H2A1_PEA(P25470), H2A1_PICGU (A5DBG4), H2A1_PICST (A3LZZ0), H2A1_PSAMI (P04735), H2A1_RAT(P02262), H2A1_SCHPO (P04909), H2A1_SOLLC (P25469), H2A1_TETPY (P02274), H2A1_TETTS (P35065), H2A1_WHEAT (P02275), H2A1_XENLA (P06897), H2A1_YEAST (P04911), H2A2A_HUMAN (Q6FI13), H2A2A_MOUSE (Q6GSS7), H2A2A_RAT (P0CC09), H2A2B_HUMAN (Q8IUE6), H2A2B_MOUSE (Q64522), H2A2C_BOVIN (A1A4R1), H2A2C_HUMAN (Q16777), H2A2C_MOUSE (Q64523), H2A2_ARATH (Q9LHQ5), H2A2_CANAL (Q59VP2), H2A2_CANGA (Q6FM31), H2A2_DEBHA (Q6BRG3), H2A2_EREGS (Q757L4), H2A2_LEIIN (P27892), H2A2_LODEL (A5DXS8), H2A2_MEDTR (Q2HU65), H2A2_ORYSI (A2YMC6), H2A2_ORYSJ (Q6ZL42), H2A2_PEA(P40281), H2A2_PICGU (A5DJJ2), H2A2_PICST (A3LXE7), H2A2_PSAMI (P04736), H2A2_SCHPO (P04910), H2A2_WHEAT (P02276), H2A2_XENLA (P06898), H2A2_YEAST (P04912), H2A3_ARATH (O81826), H2A3_CHICK (P35062), H2A3_HUMAN (Q7L7L0), H2A3_LYTPI (P09589), H2A3_MEDTR (Q1S053), H2A3_MOUSE (Q8BFU2), H2A3_ORYSI (A2YVE5), H2A3_ORYSJ (Q84NJ4), H2A3_PSAMI (P69139), H2A3_RAT(Q4FZT6), H2A3_STRPU (P09590), H2A3_VOLCA (P16865), H2A3_WHEAT (P02277), H2A4_CHICK (P02263), H2A4_ORYSI (A2Y5G8), H2A4_ORYSJ (Q6L500), H2A4_PSAMI (P07793), H2A4_RAT(Q00728), H2A4_VOLCA (P16866), H2A4_WHEAT (Q43208), H2A5_ARATH (Q94F49), H2A5_ORYSI (A2WQG7), H2A5_ORYSJ (Q94E96), H2A5_WHEAT (Q43213), H2A6_ARATH (Q9LD28), H2A6_ORYSI (A2XZN0), H2A6_ORYSJ (Q75L11), H2A6_WHEAT (Q43214), H2A7_ARATH (Q9FJE8), H2A7_ORYSI (A2ZK29), H2A7_ORYSJ (Q2QS71), H2A7_WHEAT (Q43312), H2AE_PSAMI (P69142), H2AJ_BOVIN (Q3ZBX9), H2AJ_CHICK (P70082), H2AJ_HUMAN (Q9BTM1), H2AJ_MACFA (Q4R3X5), H2AJ_MOUSE (Q8R1M2), H2AJ_RAT(A9UMV8), H2AL_STRPU (P16886), H2AO_CHITH (Q07135), H2AV1_ORYSJ (Q8H7Y8), H2AV3_ARATH (Q9C944), H2AV3_ORYSJ (Q84MP7), H2AV_BOVIN (Q32LA7), H2AV_CAEEL (Q27511), H2AV_CHICK (P02272), H2AV_DANRE (Q71PD7), H2AV_DROME (P08985), H2AV_HUMAN (Q71UI9), H2AV_MOUSE (Q3THW5), H2AV_PAGMA (Q6Y237), H2AV_RABIT (O62695), H2AV_STRPU (P08991), H2AV_TETTS (P08992), H2AV_XENLA (Q6GM74), H2AV_XENTR (Q5BJ65), H2AXA_ARATH (O04848), H2AXA_ORYSI (A2XLI0), H2AXA_ORYSJ (Q8LLP5), H2AXB_ARATH (Q9S9K7), H2AXB_ORYSI (A2ZL69), H2AXB_ORYSJ (Q2QPG9), H2AX_CICAR (O65759), H2AX_DANRE (Q7ZUY3), H2AX_HUMAN (P16104), H2AX_MOUSE (P27661), H2AX_PICAB (P35063), H2AX_TETPY (P02273), H2AX_TETTS (P35064), H2AX_XENLA (Q6GM86), H2AY_CAPO3 (A0A0D2UG83), H2AZL_XENLA (P70094), H2AZL_XENTR (Q6DER6), H2AZ_BOVIN (P0C0S4), H2AZ_CANAL (Q5AEE1), H2AZ_CHICK (Q5ZMD6), H2AZ_CRYNB (P0CO01), H2AZ_CRYNJ (P0CO00), H2AZ_DEBHA (Q6BQE9), H2AZ_DICDI (Q54LA5), H2AZ_EREGS (Q75CC6), H2AZ_HUMAN (P0C0S5), H2AZ_KLULA (Q6CUC8), H2AZ_LODEL (A5DXC6), H2AZ_MOUSE (P0C0S6), H2AZ_ONCMY (P22647), H2AZ_PICGU (A5DQL2), H2AZ_PICST (A3GHC1), H2AZ_PONAB (Q5RC42), H2AZ_RAT(P0C0S7), H2AZ_SCHPO (P48003), H2AZ_SHEEP (Q6YNC8), H2AZ_USTMA (Q4PHE4), H2AZ_YARLI (Q6C341), H2AZ_YEAST (Q12692), H2A_ACIGU (C0HJQ3), H2A_ACRFO (P35061), H2A_AGABI (Q9HGX4), H2A_ASPCL (A1CJ10), H2A_ASPFU (Q4WWC6), H2A_ASPNC (P0C953), H2A_ASPNG (P0C952), H2A_ASPOR (Q2U5A8), H2A_ASPTN (Q0CBD2), H2A_ASTRU (P02269), H2A_BOTFB (O74268), H2A_BUFGR (P55897), H2A_CAEEL (P09588), H2A_CAIMO (P13912), H2A_CHAGB (Q2HH37), H2A_CHITH (P21896), H2A_CHLRE (P50567), H2A_COCIM (Q1E5N1), H2A_CRYNB (P0CN99), H2A_CRYNJ (P0CN98), H2A_DROER (P84052), H2A_DROHY (P84053), H2A_DROME (P84051), H2A_DROSI (P84054), H2A_DROYA (P84055), H2A_EMENI (P08844), H2A_EUGGR (P40279), H2A_EUPCP (C0HJB7), H2A_EUPES (Q9M531), H2A_GIBZE (Q4HTT1), H2A_HIPHI (P59890), H2A_KLULA (Q6CK59), H2A_MAIZE (P40280), H2A_MYTCA (Q6WV66), H2A_MYTCH (Q6WV69), H2A_MYTED (Q8I0T3), H2A_MYTGA (Q6WV88), H2A_MYTTR (Q6WV67), H2A_NEOFI (A1D8G8), H2A_NEUCR (Q8X132), H2A_ONCMY (P02264), H2A_PARAN (P69140), H2A_PARLI (P13630), H2A_PENVA (Q6PV61), H2A_PETCR (P19177), H2A_PHANO (Q0U1A1), H2A_PLADU (P19178), H2A_PLAFA (P40282), H2A_PODAS (Q875B8), H2A_PYRO3 (L7HZV6), H2A_PYRO7 (P0CT12), H2A_RHYAM (P84056), H2A_SEPOF (P02268), H2A_SIPNU (P02270), H2A_SPHLA (P0DQL2), H2A_STRPU (P69141), H2A_TIGCA (P84057), H2A_TRYCR (P35066), H2A_URECA (P27325), H2A_USTMA (Q4PEF9)» more
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UniProtKB/Swiss-Prot False negative sequences |
18 sequences
H2A4_ARATH (Q9LZ46), H2A8_ORYSI (A2ZK26), H2AB1_HUMAN (P0C5Y9), H2AB2_HUMAN (P0C5Z0), H2AL3_HUMAN (A0A3B3IU63), H2AV1_ARATH (O23628), H2AV1_DICDI (Q54HW2), H2AV2_ARATH (Q9SII0), H2AV2_DICDI (Q54HV9), H2AV2_ORYSJ (Q8S857), H2AV3_DICDI (Q54HV7), H2AX_DICDI (Q54WG6), H2AZ_ASPFU (Q4WE68), H2AZ_EMENI (Q5AUJ1), H2AZ_GIBZE (Q4IMD1), H2AZ_NEUCR (Q873G4), H2A_ENCCU (Q8SSG3), H2A_YARLI (Q6C4I6)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
H2A_OLILU (P82897) |
UniProtKB/Swiss-Prot False positive sequences |
6 sequences
CBH_CLOPE (P54965), COXX_HYPNA (Q0C3D1), MCD4_ASPFU (Q4W9R7), NGCG_STRCO (O50501), NU6M_ALBCA (P48922), Y070_ANAMM (Q5PBU4)» more |
PDB [Detailed view] |
683 PDB
1AOI; 1EQZ; 1F66; 1HIO; 1HQ3; 1ID3; 1KX3; 1KX4; 1KX5; 1M18; 1M19; 1M1A; 1P34; 1P3A; 1P3B; 1P3F; 1P3G; 1P3I; 1P3K; 1P3L; 1P3M; 1P3O; 1P3P; 1S32; 1TZY; 1ZBB; 1ZLA; 2ARO; 2CV5; 2F8N; 2FJ7; 2HIO; 2JSS; 2NQB; 2NZD; 2PYO; 2RVQ; 2XQL; 3A6N; 3AFA; 3AN2; 3AV1; 3AV2; 3AYW; 3AZE; 3AZF; 3AZG; 3AZH; 3AZI; 3AZJ; 3AZK; 3AZL; 3AZM; 3AZN; 3B6F; 3B6G; 3C1B; 3C1C; 3C9K; 3KUY; 3KWQ; 3LJA; 3MNN; 3O62; 3REH; 3REI; 3REJ; 3REK; 3REL; 3TU4; 3UT9; 3UTA; 3UTB; 3W96; 3W97; 3W98; 3W99; 3WA9; 3WAA; 3WKJ; 3WTP; 3X1S; 3X1V; 4CAY; 4J8U; 4J8V; 4J8W; 4J8X; 4JJN; 4KUD; 4LD9; 4M6B; 4NFT; 4QLC; 4R8P; 4WNN; 4WU8; 4WU9; 4X23; 4XUJ; 4XZQ; 4YM5; 4YM6; 4YS3; 4Z5T; 4Z66; 4ZUX; 5AV5; 5AV6; 5AV8; 5AV9; 5AVB; 5AVC; 5AY8; 5B0Y; 5B0Z; 5B1L; 5B1M; 5B24; 5B2I; 5B2J; 5B31; 5B32; 5B33; 5B40; 5BT1; 5CHL; 5CP6; 5CPI; 5CPJ; 5CPK; 5DNM; 5DNN; 5E5A; 5F99; 5FUG; 5G2E; 5GSE; 5GSU; 5GT0; 5GT3; 5GTC; 5GXQ; 5HQ2; 5JRG; 5KGF; 5MLU; 5NL0; 5O9G; 5OMX; 5ONG; 5ONW; 5OXV; 5OY7; 5WCU; 5X0X; 5X0Y; 5X7X; 5XF3; 5XF4; 5XF5; 5XF6; 5XM0; 5XM1; 5Y0C; 5Y0D; 5Z23; 5Z30; 5Z3L; 5Z3O; 5ZBX; 6A5L; 6A5O; 6A5P; 6A5R; 6A5T; 6A5U; 6AE8; 6BUZ; 6C0W; 6DZT; 6E0C; 6E0P; 6FML; 6FQ5; 6FQ6; 6FQ8; 6FTX; 6G0L; 6GEJ; 6GEN; 6HKT; 6HTS; 6I84; 6INQ; 6IPU; 6IQ4; 6IR9; 6IRO; 6IY2; 6IY3; 6J4W; 6J4X; 6J4Y; 6J4Z; 6J50; 6J51; 6JOU; 6JR0; 6JR1; 6JXD; 6K00; 6K03; 6K09; 6K0C; 6K1I; 6K1J; 6K1K; 6KBB; 6KE9; 6KIU; 6KIV; 6KIW; 6KIX; 6KIZ; 6KVD; 6KW3; 6KW4; 6KW5; 6KXV; 6L49; 6L4A; 6L9H; 6L9Z; 6LA2; 6LA8; 6LA9; 6LAB; 6LE9; 6LER; 6LTJ; 6M2M; 6M3V; 6M44; 6M4D; 6MUO; 6MUP; 6N1Z; 6NE3; 6NJ9; 6NN6; 6NOG; 6NQA; 6NZO; 6O1D; 6O96; 6OM3; 6PA7; 6PWE; 6PWF; 6PWV; 6PWW; 6PWX; 6PX1; 6PX3; 6QLD; 6R0C; 6R1T; 6R1U; 6R25; 6R8Y; 6R8Z; 6R90; 6R91; 6R92; 6R93; 6R94; 6RNY; 6RYR; 6RYU; 6S01; 6SE6; 6SEE; 6SEF; 6SEG; 6T79; 6T7A; 6T7B; 6T7C; 6T7D; 6T90; 6T93; 6T9L; 6TDA; 6TEM; 6UPH; 6UPK; 6UPL; 6USJ; 6UXW; 6V2K; 6V92; 6VEN; 6VYP; 6VZ4; 6W4L; 6W5I; 6W5M; 6W5N; 6WKR; 6WZ5; 6WZ9; 6X0N; 6X59; 6X5A; 6XJD; 6Y5D; 6Y5E; 6YOV; 6Z6P; 6ZHX; 6ZHY; 7A08; 7AT8; 7BG9; 7BP2; 7BP4; 7BP5; 7BP6; 7BWD; 7BXT; 7BY0; 7C0M; 7C7X; 7CCQ; 7CCR; 7COW; 7CRO; 7CRP; 7CRQ; 7CRR; 7D1Z; 7D20; 7DBH; 7DBP; 7DLX; 7E8D; 7E8I; 7E9C; 7E9F; 7EA8; 7EG6; 7ENN; 7JO9; 7JOA; 7JZV; 7K5X; 7K5Y; 7K60; 7K61; 7K63; 7K6P; 7K6Q; 7K78; 7K7G; 7LYA; 7LYB; 7LYC; 7M1X; 7MBM; 7MBN; 7NKX; 7NKY; 7NL0; 7OH9; 7OHA; 7OHB; 7OHC; 7ON1; 7OTQ; 7PET; 7PEU; 7PEV; 7PEW; 7PEX; 7PEY; 7PEZ; 7PF0; 7PF2; 7PF3; 7PF4; 7PF5; 7PF6; 7PFA; 7PFC; 7PFD; 7PFE; 7PFF; 7PFT; 7PFU; 7PFV; 7PFW; 7PFX; 7PII; 7PJ1; 7R5R; 7SCY; 7SCZ; 7SSA; 7SWY; 7TAN; 7TN2; 7TRF; 7U0G; 7U0I; 7U0J; 7U46; 7U47; 7U4D; 7U50; 7U51; 7U52; 7U53; 7UD5; 7UV9; 7UX9; 7V90; 7V96; 7V99; 7V9C; 7V9J; 7V9K; 7V9S; 7VA4; 7VBM; 7VCL; 7VDT; 7VDV; 7VVU; 7VVZ; 7VZ4; 7W9V; 7WBV; 7WBW; 7WBX; 7WLP; 7X3T; 7X3V; 7X3W; 7X3X; 7XCR; 7XCT; 7XD0; 7XD1; 7XFC; 7XFH; 7XFI; 7XFJ; 7XFL; 7XFM; 7XFN; 7XNP; 7XPX; 7XSE; 7XSX; 7XSZ; 7XT7; 7XTD; 7XTI; 7XVL; 7XVM; 7XX5; 7XX6; 7XYF; 7XYG; 7XZX; 7XZY; 7XZZ; 7Y00; 7Y7I; 7Y8R; 7YBF; 7YI1; 7YI4; 7YI5; 7YQK; 7YRD; 7YRG; 7YWX; 7YYH; 7ZI4; 7ZS9; 7ZSA; 7ZSB; 8AAG; 8ATF; 8AV6; 8B0A; 8BVW; 8BYQ; 8BZ1; 8CBN; 8CBQ; 8CEO; 8CWW; 8CZE; 8DK5; 8DU4; 8ETT; 8EUE; 8EUJ; 8EVG; 8EVH; 8EVI; 8EVJ; 8F0X; 8F1E; 8F86; 8G57; 8G6G; 8G6H; 8G6Q; 8G6S; 8GPN; 8GRM; 8GRQ; 8GUI; 8GUJ; 8GUK; 8H0V; 8H0W; 8H1T; 8HAG; 8HAH; 8HAI; 8HAJ; 8HAK; 8HAL; 8HAM; 8HAN; 8HE5; 8HQY; 8HR1; 8HXY; 8HXZ; 8HY0; 8I17; 8IEG; 8IEJ; 8IHL; 8J90; 8J91; 8J92; 8JBX; 8JCC; 8JCD; 8JH2; 8JH3; 8JH4; 8JHF; 8JHG; 8JHO; 8JL9; 8JLA; 8JLB; 8JLD; 8JND; 8JNE; 8JNF; 8KB5; 8KCB; 8KCC; 8KD2; 8KD4; 8KD5; 8KD6; 8KD7; 8OF4; 8OFF; 8OL1; 8OO7; 8OOA; 8OOP; 8OOS; 8OSJ; 8OSK; 8OSL; 8OTS; 8OTT; 8OW0; 8OW1; 8OX0; 8OX1; 8PC5; 8PC6; 8PEO; 8PEP; 8PKI; 8PKJ; 8PP6; 8PP7; 8Q36; 8Q3E; 8Q3M; 8Q3X; 8RBX; 8SIY; 8SMW; 8SMX; 8SMY; 8SMZ; 8SN0; 8SN1; 8SN2; 8SN3; 8SN4; 8SN5; 8SN6; 8SN7; 8SN8; 8SN9; 8SNA; 8SPS; 8SPU; 8SVF; 8SYP; 8T3T; 8T3W; 8T3Y; 8T9F; 8T9H; 8THU; 8TOF; 8TXV; 8TXW; 8TXX; 8U13; 8U14; 8U5H; 8UPF; 8UQ8; 8UQ9; 8UQA; 8UQB; 8UQC; 8UQD; 8UQE; 8UX1; 8V4Y; 8V6V; 8V7L; 8VFX; 8VFY; 8VFZ; 8VG0; 8VG1; 8VG2; 8W9D; 8W9E; 8W9F; 8WG5; 8WH5; 8WH8; 8WH9; 8WHA; 8WHB; 8X15; 8X19; 8X1C; 8X7I; 8XBT; 8XBU; 8XGC; 8YBJ; 8YBK; 8YJF; 8YJM; 8YTI; 8YV8; 9B3P; 9C62; 9FGQ; 9FH9 » more |