PROSITE entry PS00058
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General information about the entry
Entry name [info] | DNA_MISMATCH_REPAIR_1 |
Accession [info] | PS00058 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00057 |
Name and characterization of the entry
Description [info] | DNA mismatch repair proteins mutL / hexB / PMS1 signature. |
Pattern [info] |
G-F-R-G-E-[AG]-L. |
Numerical results [info]
Total number of hits | 461 in 461 different sequences |
Number of true positive hits | 458 in 458 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 10 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.35 % |
Recall (true positives / (true positives + false negatives)) | 97.86 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
458 sequences
HEXB_STRPN (P0A3R1 ), HEXB_STRR6 (P0A3R2 ), MLH1_ARATH (Q9ZRV4 ), MLH1_DICDI (Q54KD8 ), MLH1_HUMAN (P40692 ), MLH1_MOUSE (Q9JK91 ), MLH1_RAT (P97679 ), MLH1_SCHPO (Q9P7W6 ), MLH1_YEAST (P38920 ), MLH2_YEAST (Q07980 ), MLH3_ARATH (F4JN26 ), MLH3_HUMAN (Q9UHC1 ), MUTL_ACIC5 (C1F876 ), MUTL_ACICJ (A5FW68 ), MUTL_ACTPJ (B0BTY3 ), MUTL_ACTSZ (A6VN10 ), MUTL_AERHH (A0KGR9 ), MUTL_AERS4 (A4SR27 ), MUTL_AFIC5 (B6JIV1 ), MUTL_AGARV (C4ZA52 ), MUTL_AGRFC (Q8UHI3 ), MUTL_AGRRK (B9JA11 ), MUTL_AGRVS (B9JSD6 ), MUTL_AKKM8 (B2ULE2 ), MUTL_ALIF1 (Q5E2C6 ), MUTL_ALIFM (B5FBR6 ), MUTL_ALISL (B6EMQ9 ), MUTL_ALKCK (Q5WFY4 ), MUTL_ALKMQ (A6TR78 ), MUTL_ANADF (A7HC45 ), MUTL_ANAPZ (Q2GJE2 ), MUTL_ANOFW (B7GIA3 ), MUTL_AQUAE (O67518 ), MUTL_AQUPY (P70754 ), MUTL_AZOC5 (A8I6D2 ), MUTL_AZOVD (C1DLQ0 ), MUTL_BACAA (C3P5H4 ), MUTL_BACAC (C3L823 ), MUTL_BACAH (A0RHE0 ), MUTL_BACAN (Q81WR4 ), MUTL_BACC0 (B7JJ46 ), MUTL_BACC1 (Q732V8 ), MUTL_BACC2 (B7ITM0 ), MUTL_BACC3 (C1ENZ2 ), MUTL_BACC4 (B7HDP3 ), MUTL_BACC7 (B7HLA2 ), MUTL_BACCN (A7GR98 ), MUTL_BACCQ (B9IV58 ), MUTL_BACCR (Q81A26 ), MUTL_BACCZ (Q636Q8 ), MUTL_BACFN (Q5L8M5 ), MUTL_BACFR (Q64NX1 ), MUTL_BACHK (Q6HF47 ), MUTL_BACLD (Q65JE1 ), MUTL_BACMK (A9VS12 ), MUTL_BACP2 (A8FDH4 ), MUTL_BACSU (P49850 ), MUTL_BACTN (Q8A120 ), MUTL_BACVZ (A7Z4X6 ), MUTL_BARBK (A1UU01 ), MUTL_BARHE (Q6G4R4 ), MUTL_BARQU (Q6G0J4 ), MUTL_BART1 (A9IN82 ), MUTL_BAUCH (Q1LSQ2 ), MUTL_BEII9 (B2II71 ), MUTL_BORA1 (Q2KX20 ), MUTL_BORAP (Q0SNV1 ), MUTL_BORBR (Q7WG61 ), MUTL_BORBU (O51229 ), MUTL_BORDL (B5RL36 ), MUTL_BORGP (Q662F3 ), MUTL_BORPA (Q7W4N5 ), MUTL_BORPE (Q7W0A6 ), MUTL_BORRA (B5RR29 ), MUTL_BORT9 (A1QZ05 ), MUTL_BRADU (Q89DE6 ), MUTL_BRASB (A5ECL8 ), MUTL_BRASO (A4Z0Q5 ), MUTL_BRUA1 (B2SD15 ), MUTL_BRUA2 (Q2YIH2 ), MUTL_BRUA4 (A6X3F3 ), MUTL_BRUAB (Q579M7 ), MUTL_BRUC2 (A9MDX3 ), MUTL_BRUMB (C0RKF6 ), MUTL_BRUME (P65489 ), MUTL_BRUO2 (A5VTW1 ), MUTL_BRUSI (A9WXS2 ), MUTL_BRUSU (P65490 ), MUTL_BUCA5 (B8D8D4 ), MUTL_BUCAI (P57633 ), MUTL_BUCAP (Q8K913 ), MUTL_BUCAT (B8D891 ), MUTL_BUCBP (Q89A38 ), MUTL_CALS4 (Q8RA70 ), MUTL_CARHZ (Q3ACA6 ), MUTL_CAUSK (B0SWX9 ), MUTL_CAUVC (P0CAV5 ), MUTL_CAUVN (B8H173 ), MUTL_CELJU (B3PDC3 ), MUTL_CHESB (Q11L80 ), MUTL_CHLAB (Q5L4T7 ), MUTL_CHLCH (Q3AUA2 ), MUTL_CHLCV (Q821I9 ), MUTL_CHLFF (Q256F3 ), MUTL_CHLL2 (B3EHI9 ), MUTL_CHLL3 (Q3B1F8 ), MUTL_CHLMU (Q9PJG5 ), MUTL_CHLP8 (B3QL59 ), MUTL_CHLPB (B3EL44 ), MUTL_CHLPD (A1BCW2 ), MUTL_CHLPM (A4SGM5 ), MUTL_CHLPN (Q9Z794 ), MUTL_CHLT2 (B0B8E9 ), MUTL_CHLT3 (B3QW86 ), MUTL_CHLTA (Q3KLC2 ), MUTL_CHLTB (B0BA28 ), MUTL_CHLTE (Q8KAX3 ), MUTL_CHLTR (O84579 ), MUTL_CHRSD (Q1QY28 ), MUTL_CITBB (B5EGD4 ), MUTL_CITK8 (A8AMN1 ), MUTL_CLOAB (Q97I20 ), MUTL_CLOB1 (A7FUK9 ), MUTL_CLOB6 (C3KX34 ), MUTL_CLOB8 (A6LWJ1 ), MUTL_CLOBB (B2TIB8 ), MUTL_CLOBJ (C1FNT8 ), MUTL_CLOBK (B1IM67 ), MUTL_CLOBL (A7GE44 ), MUTL_CLOBM (B1KSA2 ), MUTL_CLONN (A0Q0M7 ), MUTL_CLOP1 (Q0TRD5 ), MUTL_CLOPE (Q8XL86 ), MUTL_CLOPS (Q0STR3 ), MUTL_CLOTE (Q895H3 ), MUTL_COLP3 (Q48A24 ), MUTL_COXB2 (B6J016 ), MUTL_COXBN (A9KE32 ), MUTL_COXBR (A9NCK3 ), MUTL_COXBU (Q83CM9 ), MUTL_CROS5 (B1X109 ), MUTL_CROS8 (A7MMA2 ), MUTL_DEIRA (Q9RTR0 ), MUTL_DESAP (B1I293 ), MUTL_DESRM (A4J5Q3 ), MUTL_DICNV (A5EXM6 ), MUTL_DICT6 (B5YE42 ), MUTL_DICTD (B8E280 ), MUTL_ECO24 (A7ZV39 ), MUTL_ECO27 (B7UQH9 ), MUTL_ECO45 (B7MKX4 ), MUTL_ECO55 (B7LC24 ), MUTL_ECO57 (Q8XDN4 ), MUTL_ECO5E (B5Z2H6 ), MUTL_ECO81 (B7MSY3 ), MUTL_ECO8A (B7M8T0 ), MUTL_ECOBW (C5A1G1 ), MUTL_ECODH (B1XDS1 ), MUTL_ECOHS (A8A7R4 ), MUTL_ECOK1 (A1AJ76 ), MUTL_ECOL5 (Q0T9M3 ), MUTL_ECOL6 (Q8FAK9 ), MUTL_ECOLC (B1IT36 ), MUTL_ECOLI (P23367 ), MUTL_ECOLU (B7NGA4 ), MUTL_ECOSE (B6I274 ), MUTL_ECOSM (B1LQJ0 ), MUTL_EDWI9 (C5BDM9 ), MUTL_EHRCR (Q2GFV4 ), MUTL_ELUMP (B2KB18 ), MUTL_ENDTX (B1H0C7 ), MUTL_ENT38 (A4W5R1 ), MUTL_ERWT9 (B2VCU8 ), MUTL_ESCF3 (B7LLV2 ), MUTL_EXIS2 (B1YMD8 ), MUTL_EXISA (C4L192 ), MUTL_FERNB (A7HNR3 ), MUTL_FLAJ1 (A5FNH2 ), MUTL_FLAPJ (A6GYR1 ), MUTL_GEMAT (C1A8L2 ), MUTL_GEODF (B9M3N0 ), MUTL_GEOKA (Q5L0E4 ), MUTL_GEOSL (Q74BP0 ), MUTL_GEOSM (C6E4L2 ), MUTL_GEOSW (C5D9H6 ), MUTL_GEOTN (A4IMI1 ), MUTL_GEOUR (A5GEV5 ), MUTL_GRAFK (A0LZH8 ), MUTL_HAEDU (Q7VN43 ), MUTL_HAEI8 (Q4QPH7 ), MUTL_HAEIE (A5UB71 ), MUTL_HAEIG (A5UFN4 ), MUTL_HAEIN (P44494 ), MUTL_HAES1 (Q0I463 ), MUTL_HALH5 (Q9KAC1 ), MUTL_HALOH (B8CX97 ), MUTL_HALS3 (B0R2S6 ), MUTL_HALSA (Q9HSM6 ), MUTL_HELMI (B0TB10 ), MUTL_HERAR (A4G289 ), MUTL_HISS2 (B0UUU5 ), MUTL_IDILO (Q5QW89 ), MUTL_JANMA (A6SV55 ), MUTL_KLEP3 (B5Y334 ), MUTL_KLEP7 (A6TH85 ), MUTL_KORVE (Q1ILN0 ), MUTL_KOSOT (C5CF28 ), MUTL_LACAC (Q5FLX4 ), MUTL_LACCB (B3W9W3 ), MUTL_LACDA (Q1G939 ), MUTL_LACDB (Q048Y5 ), MUTL_LACGA (Q045Q4 ), MUTL_LACH4 (A8YTI0 ), MUTL_LACJO (Q74KW0 ), MUTL_LACLA (Q9CDL1 ), MUTL_LACLM (A2RP08 ), MUTL_LACLS (Q02VS5 ), MUTL_LACP3 (Q035Z3 ), MUTL_LACPL (Q88UZ8 ), MUTL_LEPBA (B0SB85 ), MUTL_LEPBJ (Q04QW2 ), MUTL_LEPBL (Q04Z69 ), MUTL_LEPBP (B0ST13 ), MUTL_LEPIC (Q72PF7 ), MUTL_LEPIN (Q8F6X4 ), MUTL_LEUCK (B1N024 ), MUTL_LEVBA (Q03R34 ), MUTL_LIGS1 (Q1WT16 ), MUTL_LIMF3 (B2GB18 ), MUTL_LIMRD (A5VIX0 ), MUTL_LIMRJ (B2G6E6 ), MUTL_LISIN (Q92BV2 ), MUTL_LISMC (C1L2W0 ), MUTL_LISMF (Q71ZR6 ), MUTL_LISMH (B8DFS3 ), MUTL_LISMO (Q8Y788 ), MUTL_LISW6 (A0AIK6 ), MUTL_MACCJ (B9EBI5 ), MUTL_MAGSA (Q2VYV5 ), MUTL_MANSM (Q65SD7 ), MUTL_METLZ (A2SSN1 ), MUTL_METMJ (A3CWX7 ), MUTL_METSB (B8ETE4 ), MUTL_METTP (A0B977 ), MUTL_MICAN (B0JS91 ), MUTL_NEIG1 (Q5F8M6 ), MUTL_NEIG2 (B4RLX4 ), MUTL_NEIM0 (A9M0G1 ), MUTL_NEIMA (Q9JTS2 ), MUTL_NEIMB (Q9JYT2 ), MUTL_NEIMF (A1KUP6 ), MUTL_NEOSM (Q2GDF7 ), MUTL_NITHX (Q1QIP3 ), MUTL_NITWN (Q3SPJ0 ), MUTL_NOSP7 (B2IYW1 ), MUTL_NOSS1 (Q8YSM9 ), MUTL_OPITP (B1ZZY2 ), MUTL_PARD8 (A6LEJ8 ), MUTL_PASMU (P57886 ), MUTL_PECAS (Q6D065 ), MUTL_PECCP (C6DFJ9 ), MUTL_PEDPA (Q03EQ8 ), MUTL_PELPB (B4SGC3 ), MUTL_PELPD (A1AT89 ), MUTL_PELTS (A5D2K5 ), MUTL_PERMH (C0QSY6 ), MUTL_PETMO (A9BJB9 ), MUTL_PHEZH (B4RA70 ), MUTL_PHOLL (Q7MYT9 ), MUTL_PHOV8 (A6KXH3 ), MUTL_PORG3 (B2RL29 ), MUTL_PORGI (Q7MX15 ), MUTL_PROA2 (B4S3X8 ), MUTL_PROMH (B4F203 ), MUTL_PSEA7 (A6VD59 ), MUTL_PSEA8 (B7V209 ), MUTL_PSEAB (Q02F72 ), MUTL_PSEAE (Q9HUL8 ), MUTL_PSEE4 (Q1I447 ), MUTL_PSEFS (C3KDW1 ), MUTL_PSELT (A8F560 ), MUTL_PSEPG (B0KKZ7 ), MUTL_PSEPK (Q88DD1 ), MUTL_PSEPW (B1JAD6 ), MUTL_PSESM (Q87VJ2 ), MUTL_PSET1 (Q3IDU0 ), MUTL_PSYIN (A1SZL2 ), MUTL_RALSO (Q8XWB1 ), MUTL_RHIE6 (B3PRD9 ), MUTL_RHIEC (Q2KBX7 ), MUTL_RHIL3 (Q1MKU7 ), MUTL_RHILO (Q983L2 ), MUTL_RHILW (B5ZS00 ), MUTL_RHIME (Q92RP4 ), MUTL_RHIWR (A5V3J3 ), MUTL_RHOP2 (Q2ISE2 ), MUTL_RHOP5 (Q07RR2 ), MUTL_RHOPA (Q6N1N4 ), MUTL_RHOPB (Q219I5 ), MUTL_RHOPS (Q131I8 ), MUTL_RHOPT (B3Q7Y9 ), MUTL_RHORT (Q2RQ52 ), MUTL_RICAE (C3PM22 ), MUTL_RICAH (A8GQA9 ), MUTL_RICB8 (A8GY89 ), MUTL_RICBR (Q1RGP6 ), MUTL_RICCK (A8F0A4 ), MUTL_RICCN (Q92FW6 ), MUTL_RICFE (Q4UJQ1 ), MUTL_RICPR (Q9ZC88 ), MUTL_RICPU (C4K2Y5 ), MUTL_RICRO (B0BVP7 ), MUTL_RICRS (A8GU58 ), MUTL_RICTY (Q68VN4 ), MUTL_RIPO1 (B7JY11 ), MUTL_SALA4 (B5F385 ), MUTL_SALAR (A9MFP2 ), MUTL_SALCH (Q57GM1 ), MUTL_SALDC (B5FRM6 ), MUTL_SALEP (B5R0N7 ), MUTL_SALG2 (B5R9B7 ), MUTL_SALHS (B4TFA4 ), MUTL_SALNS (B4T2R5 ), MUTL_SALPA (Q5PL49 ), MUTL_SALPB (A9N4Y4 ), MUTL_SALPC (C0Q6C7 ), MUTL_SALPK (B5BKH9 ), MUTL_SALSV (B4TSF0 ), MUTL_SALTI (Q8Z187 ), MUTL_SALTY (P14161 ), MUTL_SERP5 (A8G8U7 ), MUTL_SHEAM (A1SA23 ), MUTL_SHEB5 (A3D022 ), MUTL_SHEB8 (A6WSV4 ), MUTL_SHEB9 (A9L3W1 ), MUTL_SHEDO (Q12J93 ), MUTL_SHEFN (Q07XW5 ), MUTL_SHEHH (B0TU66 ), MUTL_SHELP (A3QAD8 ), MUTL_SHEON (Q8EJ70 ), MUTL_SHEPA (A8H8G8 ), MUTL_SHEPW (B8CIX3 ), MUTL_SHESA (A0KSR5 ), MUTL_SHESH (A8FRD3 ), MUTL_SHESM (Q0HMP1 ), MUTL_SHESR (Q0HR40 ), MUTL_SHEWM (B1KHV0 ), MUTL_SHIB3 (B2TY45 ), MUTL_SHIBS (Q31TA0 ), MUTL_SHIDS (Q328E9 ), MUTL_SHIF8 (Q0SXB2 ), MUTL_SHIFL (Q83P35 ), MUTL_SHISS (Q3YUH3 ), MUTL_SINFN (C3MGW0 ), MUTL_SINMW (A6U6K5 ), MUTL_SOLUE (Q01QW7 ), MUTL_SPHAL (Q1GSN3 ), MUTL_STAA1 (A7X1T8 ), MUTL_STAA2 (A6U1B5 ), MUTL_STAA3 (Q2FHE2 ), MUTL_STAA8 (Q93T05 ), MUTL_STAAC (Q5HGD5 ), MUTL_STAAE (A6QGJ5 ), MUTL_STAAM (P65491 ), MUTL_STAAN (P65492 ), MUTL_STAAR (Q6GHD9 ), MUTL_STAAS (Q6G9R7 ), MUTL_STAAT (A8Z1W7 ), MUTL_STAAW (Q8NWX9 ), MUTL_STACT (B9DPC0 ), MUTL_STAEQ (Q5HPP4 ), MUTL_STAES (Q8CPE9 ), MUTL_STAS1 (Q49X89 ), MUTL_STRA1 (Q3JYM6 ), MUTL_STRA3 (Q8E2R5 ), MUTL_STRE4 (C0MAS4 ), MUTL_STREM (B4U0J7 ), MUTL_STRMU (Q8DRX0 ), MUTL_STRP1 (Q99XN7 ), MUTL_STRP2 (Q04MR4 ), MUTL_STRP3 (P0DC58 ), MUTL_STRP4 (B5E6C5 ), MUTL_STRP6 (Q5X9H5 ), MUTL_STRP8 (Q8NZ25 ), MUTL_STRPB (Q1J9C2 ), MUTL_STRPC (Q1JJH1 ), MUTL_STRPG (A2RGV3 ), MUTL_STRPI (B1I8F2 ), MUTL_STRPJ (B8ZKC9 ), MUTL_STRPQ (P0DC59 ), MUTL_STRPS (B2IS10 ), MUTL_STRPZ (B5XJ09 ), MUTL_STRS7 (C0MGC4 ), MUTL_STRT1 (Q5M1Y6 ), MUTL_STRT2 (Q5M6H7 ), MUTL_STRTD (Q03MY0 ), MUTL_STRU0 (B9DW70 ), MUTL_STRZJ (C1CBX8 ), MUTL_STRZP (C1CI68 ), MUTL_STRZT (C1CP43 ), MUTL_STUS1 (A4VQP2 ), MUTL_SYMTH (Q67NL0 ), MUTL_SYNAS (Q2LUR5 ), MUTL_SYNC1 (Q3A504 ), MUTL_SYNFM (A0LJK2 ), MUTL_SYNWW (Q0AYB2 ), MUTL_SYNY3 (P73349 ), MUTL_THEAB (B7IHA2 ), MUTL_THEM4 (A6LL30 ), MUTL_THEMA (P74925 ), MUTL_THENN (B9K7B8 ), MUTL_THEP3 (B0K9L6 ), MUTL_THEPX (B0K1A3 ), MUTL_THEYD (B5YIZ6 ), MUTL_THIDA (Q3SIQ5 ), MUTL_TOLAT (C4L9N1 ), MUTL_TREPA (O83325 ), MUTL_TRIL1 (B3E5Z2 ), MUTL_TRIV2 (Q3MEV6 ), MUTL_VIBC3 (A5F3L5 ), MUTL_VIBCH (Q9KV13 ), MUTL_VIBCM (C3LR77 ), MUTL_VIBPA (Q87L05 ), MUTL_VIBVU (Q8DCV0 ), MUTL_VIBVY (Q7MH01 ), MUTL_WOLTR (Q5GSP0 ), MUTL_WOLWR (C0R515 ), MUTL_XANAC (Q8PJX2 ), MUTL_XANC5 (Q3BSD0 ), MUTL_XANC8 (Q4UVP3 ), MUTL_XANCB (B0RRZ8 ), MUTL_XANCP (Q8P8E4 ), MUTL_XANOM (Q2P295 ), MUTL_XANOP (B2SHP8 ), MUTL_XANOR (Q5GZ85 ), MUTL_XYLF2 (B2I9E6 ), MUTL_XYLFA (Q9PFB8 ), MUTL_XYLFM (B0U5C6 ), MUTL_XYLFT (Q87AC9 ), MUTL_YERE8 (A1JIR3 ), MUTL_YERP3 (A7FMY1 ), MUTL_YERPA (Q1C0Z8 ), MUTL_YERPB (B2K202 ), MUTL_YERPE (Q8ZIW4 ), MUTL_YERPG (A9QYN3 ), MUTL_YERPN (Q1CEF3 ), MUTL_YERPP (A4TRP1 ), MUTL_YERPS (Q66FB7 ), MUTL_YERPY (B1JMP1 ), PM2P1_HUMAN (A4D2B8 ), PMS1_ARATH (Q941I6 ), PMS1_DICDI (Q54QA0 ), PMS1_HUMAN (P54277 ), PMS1_SCHPO (P54280 ), PMS1_YEAST (P14242 ), PMS2_CHICK (F1NQJ3 ), PMS2_HUMAN (P54278 ), PMS2_MOUSE (P54279 )» more
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UniProtKB/Swiss-Prot False negative sequences |
10 sequences
MUTL_ANAD2 (B8J9F5 ), MUTL_ANADE (Q2IIL0 ), MUTL_ANASK (B4UCW3 ), MUTL_CYTH3 (Q11Z58 ), MUTL_MYXXD (Q1D568 ), MUTL_STRGC (A8AZU1 ), MUTL_STRSV (A3CR14 ), MUTL_THEAQ (P96082 ), MUTL_THET2 (Q72J22 ), MUTL_THET8 (Q9RA54 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
S2542_HUMAN (Q86VD7 ), S2542_MOUSE (Q8R0Y8 ), S2542_RAT (P0C546 ) |
PDB [Detailed view] |
25 PDB
1B62; 1B63; 1BKN; 1EA6; 1H7S; 1H7U; 1NHH; 1NHI; 1NHJ; 3H4L; 4P7A; 5AKB; 5AKC; 5AKD; 5X9Y; 6LZI; 6LZJ; 6LZK; 6MFQ; 7AIB; 7AIC; 7P8V; 7RCB; 7RCI; 7RCK » more |