PROSITE logo

PROSITE entry PS00088


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] SOD_MN
Accession [info] PS00088
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00083

Name and characterization of the entry

Description [info] Manganese and iron superoxide dismutases signature.
Pattern [info] 
D-x-[WF]-E-H-[STA]-[FY](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 212 in 212 different sequences
Number of true positive hits 212 in 212 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 31
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] manganese at position 1
Site [info] manganese at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 212 sequences 

SODB_ASPNG  (Q3MSU9), SODF1_ARATH (P21276), SODF1_ORYSJ (Q5VRL3), 

SODF2_ARATH (Q9LU64), SODF2_ORYSJ (Q5VSB7), SODF3_ARATH (Q9FMX0), 
SODF_ACIAM  (Q9P9L3), SODF_AERPE  (Q9Y8H8), SODF_BABBO  (O15905), 
SODF_BACFR  (P53638), SODF_BACSU  (O35023), SODF_BORPE  (P37369), 
SODF_BURSP  (D3KVM5), SODF_CAMCO  (P53639), SODF_CAMJE  (Q0PBW9), 
SODF_CAMJJ  (A1VXQ2), SODF_COXBU  (P19685), SODF_ECO57  (P0AGD5), 
SODF_ECOL6  (P0AGD4), SODF_ECOLI  (P0AGD3), SODF_ENTH1  (P34107), 
SODF_HELPJ  (Q9ZKE6), SODF_HELPY  (P43312), SODF_LEGPH  (P31108), 
SODF_LEPBY  (P50061), SODF_METJ   (P23744), SODF_METTH  (P18868), 
SODF_METTM  (Q60036), SODF_MYCBO  (Q7TVI9), SODF_MYCTO  (P9WGE6), 
SODF_MYCTU  (P9WGE7), SODF_NICPL  (P22302), SODF_NOSS1  (Q8YSZ1), 
SODF_PHOLE  (P09213), SODF_PLAF7  (Q8IAY6), SODF_PLAFA  (Q9TW89), 
SODF_PLAFX  (Q27740), SODF_PLAVI  (Q9Y1A9), SODF_PORGI  (P19665), 
SODF_PSEAE  (P53641), SODF_PSEPK  (Q88PD5), SODF_PSEPU  (P09223), 
SODF_PSET1  (P84612), SODF_PYRAE  (O93724), SODF_RHIME  (Q9XD74), 
SODF_RHOCA  (O30970), SODF_RICBR  (Q1RH88), SODF_RICCN  (Q92HJ3), 
SODF_RICFE  (Q4ULI1), SODF_RICPR  (Q9ZD15), SODF_RICTY  (Q68WK0), 
SODF_SACS2  (P80857), SODF_SALTI  (P0A2F5), SODF_SALTY  (P0A2F4), 
SODF_SHIFL  (P0AGD6), SODF_SOYBN  (P28759), SODF_STRCO  (O51917), 
SODF_SULAC  (Q08713), SODF_SYNE7  (P18655), SODF_SYNY3  (P77968), 
SODF_TETPY  (P19666), SODM1_ARATH (O81235), SODM1_BACAN (Q81LW0), 
SODM1_BACCR (Q818I1), SODM1_CAEEL (P31161), SODM1_HALME (O08461), 
SODM1_HALSA (P09737), SODM1_HALVD (Q03300), SODM1_LEPBY (P50058), 
SODM1_MAIZE (P09233), SODM1_STAA3 (Q2FGH0), SODM1_STAA8 (P0A0J3), 
SODM1_STAAB (Q2YT26), SODM1_STAAC (Q5HFK7), SODM1_STAAM (P0A0J1), 
SODM1_STAAN (P99098), SODM1_STAAR (Q6GGE6), SODM1_STAAS (Q6G913), 
SODM1_STAAW (P0A0J2), SODM2_ARATH (Q9LYK8), SODM2_BACAN (Q81JK8), 
SODM2_BACCR (Q814I6), SODM2_CAEEL (P41977), SODM2_HALME (O08460), 
SODM2_HALSA (P09224), SODM2_HALVD (Q03301), SODM2_LEPBY (P50059), 
SODM2_MAIZE (P41978), SODM2_STAA3 (Q2FKC6), SODM2_STAA8 (Q2G261), 
SODM2_STAAB (Q2YUU9), SODM2_STAAC (Q5HJN5), SODM2_STAAM (P66830), 
SODM2_STAAN (P66831), SODM2_STAAR (Q6GKH2), SODM2_STAAS (Q6GCZ1), 
SODM2_STAAW (P66832), SODM3_LEPBY (P50060), SODM3_MAIZE (P41979), 
SODM4_MAIZE (P41980), SODM_ACIAD  (Q59094), SODM_AGABI  (Q9P4T6), 
SODM_ASPFU  (Q92450), SODM_ASPOR  (Q877B6), SODM_BACCA  (P28760), 
SODM_BACSU  (P54375), SODM_BORBU  (O30563), SODM_BORPE  (P53642), 
SODM_BOVIN  (P41976), SODM_BUCAI  (P57286), SODM_BUCAP  (Q8K9V4), 
SODM_BUCBP  (Q89AR7), SODM_CALJA  (Q8HXP0), SODM_CANAX  (O13401), 
SODM_CAPAN  (O49066), SODM_CAVPO  (P49114), SODM_CHAFE  (O96347), 
SODM_CHLMU  (Q9PKA0), SODM_CHLPN  (Q9Z9C4), SODM_CHLRE  (Q42684), 
SODM_CHLTR  (O84296), SODM_CORDI  (P42821), SODM_CRYNH  (J9VWW9), 
SODM_DEBHA  (Q6BQZ1), SODM_DEIRA  (Q9RUV2), SODM_DICDI  (Q55BJ9), 
SODM_DROME  (Q00637), SODM_ECO57  (P66828), SODM_ECOLI  (P00448), 
SODM_ENTFA  (Q838I4), SODM_GANMI  (Q92429), SODM_GEOSE  (P00449), 
SODM_GLOMM  (Q694A3), SODM_HAEDU  (O30826), SODM_HAEIN  (P43725), 
SODM_HALH5  (Q9KD10), SODM_HALHI  (O08459), SODM_HALMA  (Q03302), 
SODM_HEVBR  (P35017), SODM_HORSE  (Q9XS41), SODM_HUMAN  (P04179), 
SODM_HYLLA  (Q8HXP5), SODM_LACLA  (P0A4J1), SODM_LACLM  (P0A4J2), 
SODM_LISIN  (Q92BR6), SODM_LISIV  (P28763), SODM_LISMO  (P28764), 
SODM_MACFA  (Q8HXP3), SODM_MACFU  (Q8HXP4), SODM_MACMU  (Q8HXP2), 
SODM_MACNE  (Q5FB30), SODM_MANHA  (Q59679), SODM_MOUSE  (P09671), 
SODM_MYCAV  (P47201), SODM_MYCFO  (Q59519), SODM_MYCIA  (P46728), 
SODM_MYCKA  (P50912), SODM_MYCLE  (P13367), SODM_MYCLP  (O86165), 
SODM_MYCPA  (P53647), SODM_MYCS2  (A0R652), SODM_MYCSC  (P50913), 
SODM_MYCSM  (P53649), SODM_NEUCR  (Q9Y783), SODM_NICPL  (P11796), 
SODM_NOCAS  (P53651), SODM_ONCVO  (P41981), SODM_ORYSJ  (Q43008), 
SODM_PANTR  (Q8HXP7), SODM_PASMU  (Q9CPN6), SODM_PEA(P27084), 
SODM_PENCH  (O75007), SODM_PONPY  (Q8HXP6), SODM_PROFR  (P80293), 
SODM_PRUPE  (Q9SM64), SODM_PSEAE  (P53652), SODM_PSEPU  (P77929), 
SODM_RABIT  (P41982), SODM_RAOPL  (P22799), SODM_RAT(P07895), 
SODM_SALTI  (Q8Z2V9), SODM_SALTY  (P43019), SODM_SAPAP  (Q8HXP1), 
SODM_SCHPO  (Q9UQX0), SODM_SHIFL  (P66829), SODM_STACA  (Q9F326), 
SODM_STAEP  (Q8VQ15), SODM_STAEQ  (Q5HNZ5), SODM_STAES  (P0C0Q6), 
SODM_STAHJ  (Q4L6Q3), SODM_STAS1  (Q49XZ6), SODM_STAXY  (Q9K4V3), 
SODM_STRA3  (P0A4J3), SODM_STRA5  (P0A4J4), SODM_STRAG  (P0A4J5), 
SODM_STRMU  (P09738), SODM_STRP1  (P0C0I1), SODM_STRP3  (P0DF72), 
SODM_STRP6  (Q5XBF8), SODM_STRP8  (Q8P0D4), SODM_STRPN  (P0A4J6), 
SODM_STRPQ  (P0DF73), SODM_STRPY  (P0C0I0), SODM_STRR6  (P0A4J7), 
SODM_THEAQ  (P53653), SODM_THET2  (P61502), SODM_THET8  (P61503), 
SODM_VIRHA  (Q7SIC3), SODM_XANC8  (P0C0F9), SODM_XANCP  (P0C0F8), 
SODM_YEAST  (P00447), SODM_YEREN  (P53655)
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

SODF_AQUAE  (O67470), SODF_AQUPY  (Q9X6W9), SODF_PLAMA  (Q9Y1B0), 

SODM_CUPMC  (P17550)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 31 sequences 

SODF_ANASL  (P83157), SODM_ALTAL  (P86254), SODM_APOCL  (P28766), 

SODM_ARTDA  (P83289), SODM_BACCE  (P83076), SODM_BRAFL  (P28761), 
SODM_CANLF  (P54712), SODM_DESDE  (P11419), SODM_EPTST  (P28762), 
SODM_HORVU  (P28524), SODM_LITCT  (P36215), SODM_MYCCE  (P53643), 
SODM_MYCCH  (P53644), SODM_MYCMA  (P53645), SODM_MYCMR  (P53646), 
SODM_MYCPH  (P53648), SODM_MYCSI  (P80582), SODM_MYCSZ  (P53650), 
SODM_PALVU  (P28765), SODM_PETMA  (P28767), SODM_PIG(P28768), 
SODM_STRAI  (O33603), SODM_STRAY  (O33605), SODM_STRCB  (O54210), 
SODM_STRGR  (P80733), SODM_STRIN  (O54233), SODM_STRMT  (O33686), 
SODM_STROR  (O54263), SODM_STRPA  (O33756), SODM_STRPO  (O54266), 
SODM_STRSL  (O33783)
» more

PDB
[Detailed view]		 126 PDB

1AP5; 1AP6; 1AR4; 1AR5; 1AVM; 1B06; 1BS3; 1BSM; 1BT8; 1D5N; 1DT0; 1EM1; 1EN4; 1EN5; 1EN6; 1GN2; 1GN3; 1GN4; 1GN6; 1I08; 1I0H; 1IDS; 1ISA; 1ISB; 1ISC; 1IX9; 1IXB; 1JR9; 1KKC; 1LUV; 1LUW; 1MA1; 1MMM; 1MNG; 1MSD; 1N0J; 1N0N; 1P7G; 1PL4; 1PM9; 1QNM; 1QNN; 1SZX; 1UER; 1UES; 1VAR; 1VEW; 1WB7; 1WB8; 1XDC; 1XIL; 1XRE; 1XUQ; 1Y67; 1ZA5; 1ZLZ; 1ZSP; 1ZTE; 1ZUQ; 2ADP; 2ADQ; 2AW9; 2BKB; 2BPI; 2CDY; 2CE4; 2GDS; 2GOJ; 2NYB; 2P4K; 2QKA; 2QKC; 2RCV; 3AK1; 3AK2; 3AK3; 3BFR; 3CEI; 3DC5; 3DC6; 3EVK; 3K9S; 3KKY; 3LIO; 3LJ9; 3LJF; 3LSU; 3MDS; 3OT7; 3RN4; 3SDP; 3TQJ; 4C7U; 4E4E; 4F6E; 4L2A; 4L2B; 4L2C; 4L2D; 4X9Q; 4YIP; 5AG2; 5GXO; 5N56; 5N57; 5T30; 5VF9; 6ELK; 6EX3; 6EX4; 6EX5; 6PRO; 6QV8; 6QV9; 6QZM; 6QZN; 6S0D; 7AZQ; 7AZR; 7BJK; 7KKS; 7KKU; 7KKW; 7KLB; 8AVL; 8AVM
» more