PROSITE logo

PROSITE entry PS00105


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] AA_TRANSFER_CLASS_1
Accession [info] PS00105
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00098

Name and characterization of the entry

Description [info] Aminotransferases class-I pyridoxal-phosphate attachment site.
Pattern [info]
[GS]-[LIVMFYTAC]-[GSTA]-K-x(2)-[GSALVN]-[LIVMFA]-x-[GNAR]-{V}-R-[LIVMA]-
[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 189 in 189 different sequences
Number of true positive hits 169 in 169 different sequences
Number of 'unknown' hits 0
Number of false positive hits 20 in 20 different sequences
Number of false negative sequences 111
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 89.42 %
Recall (true positives / (true positives + false negatives)) 60.36 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 4
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
169 sequences

1A111_ARATH (Q9S9U6), 1A112_ARATH (Q8GYY0), 1A11_ARATH  (Q06429), 
1A11_CUCMA  (P23599), 1A11_CUCPE  (P23279), 1A11_ORYSI  (A2XLL2), 
1A11_ORYSJ  (Q10DK7), 1A11_PRUMU  (Q9MB95), 1A12_ARATH  (Q06402), 
1A12_CUCMA  (Q00257), 1A12_CUCPE  (Q00379), 1A12_ORYSJ  (Q7XQ85), 
1A12_SOLLC  (P18485), 1A13_ORYSJ  (A0A0P0WIY3), 1A13_SOLLC  (Q42881), 
1A14_ARATH  (Q43309), 1A14_ORYSJ  (Q5W6F9), 1A14_SOLLC  (P29535), 
1A15_ARATH  (Q37001), 1A15_ORYSJ  (A0A0P0UZP7), 1A16_ARATH  (Q9SAR0), 
1A16_ORYSJ  (Q9SNN8), 1A17_ARATH  (Q9STR4), 1A18_ARATH  (Q9T065), 
1A19_ARATH  (Q9M2Y8), 1A1C_DIACA  (P27486), 1A1C_MALDO  (P37821), 
1A1C_SOYBN  (P31531), 1A1C_TOBAC  (Q07262), 1A1C_VIGRR  (Q01912), 
1A1L1_TAKRU (Q9W698), AAPAT_CHLTE (Q8KDS8), AAPAT_NITEU (Q82WA8), 
AAPAT_RHILP (O86459), AAPAT_RHIME (Q02635), AAPAT_RICBR (Q1RGV0), 
AAPAT_RICCN (Q92JE7), AAPAT_RICFE (Q4UND3), AAPAT_RICPR (Q9ZE56), 
AAPAT_RICTY (Q68XV9), AAPAT_THEAQ (O33822), AAPAT_THET8 (Q56232), 
AAT1_ARATH  (P46643), AAT1_BACSU  (P53001), AAT1_MEDSA  (P28011), 
AAT2_ARATH  (P46645), AAT3_ARATH  (P46644), AAT3_BACSU  (O07587), 
AAT4_ARATH  (P46646), AAT5_ARATH  (P46248), AATC_BOVIN  (P33097), 
AATC_CAEEL  (Q22067), AATC_CHICK  (P00504), AATC_DAUCA  (P28734), 
AATC_HORSE  (P08906), AATC_HUMAN  (P17174), AATC_MACFA  (Q4R5L1), 
AATC_MOUSE  (P05201), AATC_ORYSJ  (P37833), AATC_PANTR  (A5A6K8), 
AATC_PIG(P00503), AATC_PONAB  (Q5R691), AATC_RAT(P13221), 
AATC_RHIME  (O87320), AATC_YEAST  (P23542), AATM_BOVIN  (P12344), 
AATM_CHICK  (P00508), AATM_DANRE  (Q7SYK7), AATM_DICDI  (Q55F21), 
AATM_HORSE  (P08907), AATM_HUMAN  (P00505), AATM_LUPAN  (P26563), 
AATM_MACFA  (Q4R559), AATM_MOUSE  (P05202), AATM_PIG(P00506), 
AATM_PONAB  (Q5REB0), AATM_RABIT  (P12345), AATM_RAT(P00507), 
AATM_SCHPO  (O94320), AATM_XENTR  (Q28F67), AATM_YEAST  (Q01802), 
AAT_BACY2   (P23034), AAT_ECOLI   (P00509), AAT_GEOSE   (Q59228), 
AAT_HAEIN   (P44425), AAT_METJA   (Q60317), AAT_MUSP7   (C6C2Z3), 
AAT_PSEAE   (P72173), AAT_PYRAB   (Q9V0L2), AAT_PYRHO   (O58489), 
AAT_RHIME   (P58350), AAT_RHIML   (Q06191), AAT_SACS2   (P14909), 
AAT_SALTI   (Q56114), AAT_SALTY   (P58661), AAT_STRAW   (Q82DR2), 
AAT_STRVG   (Q60013), AAT_SULAC   (Q4J8X2), AAT_SULTO   (Q972A2), 
AAT_SYNY3   (Q55128), AAT_THEKO   (O93744), AAT_THEMA   (Q9X0Y2), 
ARAT2_THELN (H3ZPU1), ARUH_PSEAE  (Q9HUI9), ASDA_COMTE  (Q93QX0), 
ASDP_PSESP  (Q53IZ1), ATTY_BOVIN  (Q58CZ9), ATTY_DICDI  (Q54K95), 
ATTY_HUMAN  (P17735), ATTY_MOUSE  (Q8QZR1), ATTY_RAT(P04694), 
ATTY_RHIME  (Q02636), ATTY_TRYCR  (P33447), AVTA_MYCTU  (P96847), 
BACF_BACSU  (P39643), BNA3_YEAST  (P47039), C1436_CAMJE (Q0P8H8), 
COBC_PSEAE  (Q9I468), COBC_SINSX  (P21633), COBDQ_LEPIN (Q8EXQ7), 
COBD_SALTI  (Q8Z8H8), COBD_SALTY  (P97084), DAPAT_AQUAE (O66630), 
DAPAT_AZOPC (B6YRL2), DAPAT_CARHZ (Q3AC10), DAPAT_CHLMU (Q9PK04), 
DAPAT_CHLPN (Q9Z856), DAPAT_CHLT2 (B0B7W0), DAPAT_CHLTA (Q3KLW3), 
DAPAT_CHLTB (B0BC25), DAPAT_CHLTR (O84395), DAPAT_DEHM1 (Q3Z8H5), 
DAPAT_DEHMB (A5FRC5), DAPAT_DEHMC (Q3ZXC8), DAPAT_DESAP (B1I544), 
DAPAT_GLOVI (Q7NDX4), DAPAT_HALOH (B8CX89), DAPAT_LACP7 (A9KJ19), 
DAPAT_METJA (Q58786), DAPAT_METMP (Q6LX26), DAPAT_MOOTA (Q2RK33), 
DAPAT_NATTJ (B2A250), DAPAT_NITV2 (Q72BI1), DAPAT_NITV4 (A1VDD3), 
DAPAT_NITV9 (B8DJJ6), DAPAT_OLEA2 (Q30ZX9), DAPAT_SYNFM (A0LEA5), 
DAPT2_NOSS1 (Q8YP73), DAPT2_TRIV2 (Q3MDN5), DAPX_BACSU  (P16524), 
FRBH_STRR3  (Q0ZQ41), HIS82_HAEIN (Q57004), ISS1_ARATH  (Q9C969), 
MFNC_METJA  (Q58097), NOAT_STRMU  (Q8DTM1), OXYQ_STRRM  (Q3S8P9), 
PAT_ARATH   (Q9SIE1), PAT_PETHY   (E9L7A5), PAT_PINPS   (Q5F4K8), 
PHHC_PSEAE  (P43336), TYRB_ECOLI  (P04693), TYRB_KLEPN  (O85746), 
TYRB_SALTY  (P74861), UCDG_ASPUT  (A0A0C1E1D0), Y1178_MYCTU (O50434), 
Y2231_MYCTO (P9WQ88), Y2231_MYCTU (P9WQ89), Y2256_MYCBO (P63501), 
YUGH_BACSU  (Q795M6)
» more

UniProtKB/Swiss-Prot
False negative sequences
111 sequences

1A110_ARATH (Q9LQ10), 1A1L1_BOVIN (Q5E9H2), 1A1L1_HUMAN (Q96QU6), 
1A1L1_MOUSE (A2AIG8), 1A1L2_HUMAN (Q4AC99), 1A1L2_MOUSE (Q3UX83), 
AAPAT_AQUAE (O67781), AAPAT_CERS1 (A3PMF8), AATC2_BOVIN (Q2T9S8), 
AATC2_HUMAN (Q8NHS2), AATC2_MOUSE (Q7TSV6), AATC_DICDI  (Q54SF7), 
AATC_SCHPO  (O42652), ALAA_ECOL6  (P0A960), ALAA_ECOLI  (P0A959), 
ALAA_HAEIN  (P71348), ALAA_MYCBO  (P63499), ALAA_MYCTO  (P9WQ90), 
ALAA_MYCTU  (P9WQ91), ALAA_SHIFL  (P0A961), ALAC_ECOLI  (P77434), 
ARAT1_THELN (H3ZPL1), ASPAT_CORGL (Q8NTR2), ASPAT_MYCTU (O69689), 
DAPAT_ACAM1 (B0CDH5), DAPAT_ACET2 (A3DK17), DAPAT_AGARV (C4ZG66), 
DAPAT_ARATH (Q93ZN9), DAPAT_BACFN (Q5LC03), DAPAT_BACFR (Q64SY6), 
DAPAT_BACTN (Q8AAB8), DAPAT_CHLAB (Q5L6M0), DAPAT_CHLCV (Q824A4), 
DAPAT_CHLFF (Q253K9), DAPAT_CITBB (B5EGX2), DAPAT_CROS5 (B1WSG7), 
DAPAT_CYAP4 (B8HJY4), DAPAT_DESAH (C0QFJ4), DAPAT_DESDA (B8IZX8), 
DAPAT_DESHD (Q18T09), DAPAT_DESHY (Q24S01), DAPAT_DESOH (A8ZXV5), 
DAPAT_DESPS (Q6AL81), DAPAT_GEODF (B9M384), DAPAT_GEOMG (Q39Z65), 
DAPAT_GEOSL (Q74GT3), DAPAT_GEOSM (C6E9Q7), DAPAT_GEOUR (A5GD93), 
DAPAT_GLOC7 (B7KL61), DAPAT_HELMI (B0TA38), DAPAT_LACE2 (C4Z4Y1), 
DAPAT_LAWIP (Q1MR87), DAPAT_LEPBA (B0SEH8), DAPAT_LEPBJ (Q04UL5), 
DAPAT_LEPBL (Q04YV8), DAPAT_LEPBP (B0SMK7), DAPAT_LEPIC (Q72NJ3), 
DAPAT_LEPIN (Q8F814), DAPAT_MARSD (C6BUK3), DAPAT_METS3 (A5UN82), 
DAPAT_METST (Q2NFU1), DAPAT_METTH (O26158), DAPAT_MICAN (B0JUM0), 
DAPAT_NOSP7 (B2J2U3), DAPAT_PARD8 (A6L8U2), DAPAT_PARMW (Q7U4C3), 
DAPAT_PARUW (Q6MDE0), DAPAT_PELPD (A1ATI6), DAPAT_PHOV8 (A6L7E4), 
DAPAT_PICP2 (B1XKF6), DAPAT_PROM0 (A3PEY9), DAPAT_PROM1 (A2C4T7), 
DAPAT_PROM3 (A2CC97), DAPAT_PROM4 (A9BCJ1), DAPAT_PROM5 (A2BYM6), 
DAPAT_PROM9 (Q318P3), DAPAT_PROMA (Q7VA14), DAPAT_PROMM (Q7V4Z3), 
DAPAT_PROMP (Q7UZZ3), DAPAT_PROMS (A2BT75), DAPAT_PROMT (Q46IX2), 
DAPAT_RIPO1 (B7JVL5), DAPAT_SYNC1 (Q3A1U5), DAPAT_SYNE7 (Q31PY6), 
DAPAT_SYNJA (Q2JS04), DAPAT_SYNJB (Q2JLL9), DAPAT_SYNP6 (Q5N492), 
DAPAT_SYNPW (A5GIN1), DAPAT_SYNR3 (A5GW23), DAPAT_SYNS3 (Q0ID68), 
DAPAT_SYNS9 (Q3AW44), DAPAT_SYNSC (Q3AMU5), DAPAT_SYNY3 (Q55828), 
DAPAT_THEVB (Q8DH57), DAPAT_TRIEI (Q10ZC3), DAPAT_TRIL1 (B3E933), 
DAPT1_NOSS1 (Q8YM38), DAPT1_TRIV2 (Q3MAL4), GLII_ASPFU  (Q4WMJ9), 
HPGT_AMYOR  (O52815), LYSN_THET2  (Q72LL6), MTNE_BACSU  (O31665), 
NAAT1_ORYSJ (A0A0P0VI36), NAATA_HORVU (Q9ST02), NAATB_HORVU (Q9ST03), 
SIRI_LEPMC  (Q6Q887), TCPI_CLAP2  (M1W859), TYRB_PARDE  (P95468), 
Y104_SACS2  (P95957), Y6286_MYCS2 (A0R5R7), YBDL_ECOLI  (P77806)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
6 sequences

AAT1_PSEMZ  (P85906), AAT2_PSEMZ  (P85951), AATC_RABIT  (P12343), 
AATM_CATRO  (P85310), AAT_METEX   (P52069), AAT_STRGR   (P36692)
» more

UniProtKB/Swiss-Prot
False positive sequences
20 sequences

BAME1_ARATH (O49545), BAME2_ARATH (Q9M2Z1), CLP1_NEUCR  (Q7SAB7), 
DRB3_ORYSJ  (Q0DJA3), DRB7_ORYSJ  (Q0IV63), DRB8_ORYSJ  (Q0IQN6), 
HIS81_MANSM (Q65S79), HIS82_ARCFU (O28255), LR3E_METSD  (A0A172U6X0), 
MILK1_BOVIN (E1BBG2), MILK1_HUMAN (Q8N3F8), MILK1_MOUSE (Q8BGT6), 
MILK1_RAT   (D3ZQL6), RBKTP_CUPNH (Q0K3R9), RBKTP_CUPTR (B2AIF3), 
RGI5_ARATH  (C0LGF5), TDCD_YERE8  (A1JIM9), TRXR3_MOUSE (Q99MD6), 
WDR46_CANLF (Q5TJE7), WDR46_HUMAN (O15213)
» more

PDB
[Detailed view]
180 PDB

1AAM; 1AAT; 1AAW; 1AHE; 1AHF; 1AHG; 1AHX; 1AHY; 1AJR; 1AJS; 1AMA; 1AMQ; 1AMR; 1AMS; 1ARG; 1ARH; 1ARI; 1ARS; 1ART; 1ASA; 1ASB; 1ASC; 1ASD; 1ASE; 1ASF; 1ASG; 1ASL; 1ASM; 1ASN; 1B4X; 1B5O; 1B5P; 1B8G; 1BJW; 1BKG; 1BQA; 1BQD; 1BW0; 1C9C; 1CQ6; 1CQ7; 1CQ8; 1CZC; 1CZE; 1G4V; 1G4X; 1G7W; 1G7X; 1GC3; 1GC4; 1GCK; 1IAX; 1IAY; 1IVR; 1IX6; 1IX7; 1IX8; 1LC5; 1LC7; 1LC8; 1LKC; 1M4N; 1M7Y; 1MAP; 1MAQ; 1O4S; 1OXO; 1OXP; 1QIR; 1QIS; 1QIT; 1SPA; 1TAR; 1TAS; 1TAT; 1TOE; 1TOG; 1TOI; 1TOJ; 1TOK; 1X28; 1X29; 1X2A; 1YAA; 1YNU; 1YOO; 2CST; 2D5Y; 2D61; 2D63; 2D64; 2D65; 2D66; 2D7Y; 2D7Z; 2Q7W; 2QA3; 2QB2; 2QB3; 2QBT; 2Z61; 2ZY2; 2ZY3; 2ZY4; 2ZY5; 3AAT; 3ASA; 3ASB; 3B46; 3DYD; 3FSL; 3HLM; 3II0; 3PD6; 3PDB; 3PDX; 3PIU; 3QN6; 3QPG; 3TAT; 3WZF; 3ZZJ; 3ZZK; 4A00; 4F5F; 4F5G; 4F5H; 4F5I; 4F5J; 4F5K; 4F5L; 4F5M; 5AX8; 5BJ3; 5BJ4; 5EAA; 5T4L; 5TON; 5TOQ; 5TOR; 5TOT; 5VJZ; 5VK7; 5VWQ; 5VWR; 5WMH; 5WMI; 5WMK; 5YHV; 6DNA; 6DND; 6F35; 6F5V; 6F77; 6L1L; 6L1N; 6L1O; 6LIG; 7AAT; 7DLW; 7DLY; 7TUR; 8AAT; 8E9C; 8E9D; 8E9J; 8E9K; 8E9L; 8E9M; 8E9N; 8E9O; 8E9P; 8E9Q; 8E9R; 8E9S; 8E9T; 8E9U; 8E9V; 8SKR; 9AAT
» more