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Entry: PS00201

General information about the entry

Entry name [info] FLAVODOXIN
Accession [info] PS00201
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00178

Name and characterization of the entry

Description [info] Flavodoxin signature.
Pattern [info] 
[LIV]-[LIVFY]-[FY]-x-[ST]-{V}-x-[AGC]-x-T-{P}-x(2)-A-{L}-x-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 64 in 64 different sequences
Number of true positive hits 59 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 92.19 %
Recall (true positives / (true positives + false negatives)) 84.29 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

DFA2_THEEB  (Q8DJ55    ), DFA3_SYNY3  (P74373    ), DFA4_NOSS1  (Q8YNW7    ), 

DFA4_SYNY3  (P72721    ), DFA5_NOSS1  (Q8Z0C1    ), DFA6_NOSS1  (Q8YQE2    ), 
FLAV_AQUAE  (O67866    ), FLAV_AZOCH  (P23001    ), FLAV_AZOVI  (P00324    ), 
FLAV_BUCAI  (P57385    ), FLAV_BUCAP  (Q8K9N5    ), FLAV_BUCBP  (Q89AK0    ), 
FLAV_CHOCR  (P14070    ), FLAV_CLOBE  (P00322    ), FLAV_CLOSA  (P18855    ), 
FLAV_DESAD  (P18086    ), FLAV_DESDE  (P26492    ), FLAV_DESGG  (Q01095    ), 
FLAV_DESVH  (P00323    ), FLAV_DESVM  (P71165    ), FLAV_ECO57  (P61951    ), 
FLAV_ECOL6  (P61950    ), FLAV_ECOLI  (P61949    ), FLAV_ENTAG  (P28579    ), 
FLAV_HAEIN  (P44562    ), FLAV_KLEPN  (O07026    ), FLAV_MEGEL  (P00321    ), 
FLAV_NOSS1  (P0A3D9    ), FLAV_NOSSM  (P35707    ), FLAV_NOSSO  (P0A3E0    ), 
FLAV_RHOCB  (P52967    ), FLAV_SALTY  (Q8ZQX1    ), FLAV_SHIFL  (Q83S80    ), 
FLAV_SYNE7  (P10340    ), FLAV_SYNP2  (P31158    ), FLAV_SYNY3  (P27319    ), 
FLAV_TREPA  (O83895    ), FLAW_AZOVD  (P52964    ), FLAW_BACSU  (O34589    ), 
FLAW_DESDA  (P80312    ), FLAW_DESGI  (Q01096    ), FLAW_ECO57  (P0ABY6    ), 
FLAW_ECOL6  (P0ABY5    ), FLAW_ECOLI  (P0ABY4    ), FLAW_ENTAG  (P71169    ), 
FLAW_KLEOX  (P56268    ), FLAW_KLEPN  (P04668    ), FLAW_SALTI  (P0A1N7    ), 
FLAW_SALTY  (P0A1N6    ), FPRA1_CLOAB (Q97K92    ), FPRA2_CLOAB (Q97GC0    ), 
FPRA_METTM  (Q50497    ), FPRA_RHOCB  (D5ARY8    ), HEMG_ECO57  (P0ACB6    ), 
HEMG_ECOL6  (P0ACB5    ), HEMG_ECOLI  (P0ACB4    ), HEMG_SALTY  (Q9L6L1    ), 
NQOR_ARCFU  (O29904    ), NQOR_PSEAE  (Q9I509    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

FLAV_BACSU  (O34737    ), FLAV_HELPJ  (Q9ZK53    ), FLAV_HELPY  (O25776    ), 

FLAV_TRIEI  (O52659    ), FLDP_PSEAB  (A0A0H2ZDT7), FPAA_METTH  (O27404    ), 
FPRA_METJA  (Q58158    ), FPRA_MOOTA  (Q9FDN7    ), FPRA_RHOCA  (P0CY93    ), 
PNO_CRYPV   (Q968X7    ), PNO_EUGGR   (Q94IN5    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

FLAW_AZOCH  (P23002    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			5 sequences
			


			
NQOR_METBF  (Q46B88    ), PLRX1_ARATH (Q9LJ64    ), S22AI_MOUSE (Q78KK3    ), 

			
S22AI_RAT   (Q6AY78    ), URE1_BRADU  (Q89UG0    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			103 PDB
			


			1AG9; 1AHN; 1AKQ; 1AKR; 1AKT; 1AKU; 1AKV; 1AKW; 1AZL; 1BU5; 1C7E; 1C7F; 
			
				1CZH; 1CZK; 1CZL; 1CZN; 1CZO; 1CZR; 1CZU; 1D03; 1D04; 1DX9; 1F4P; 1FLA; 
				1FLD; 1FLN; 1FLV; 1FTG; 1FVX; 1FX1; 1I1O; 1J8Q; 1J9E; 1J9G; 1OBO; 1OBV; 
				1OFV; 1QHE; 1RCF; 1WSB; 1WSW; 1XT6; 1XYV; 1XYY; 1YOB; 1ZWK; 1ZWL; 2A5L; 
				2ARK; 2FAX; 2FCR; 2FDX; 2FLV; 2FOX; 2FVX; 2FX2; 2FZ5; 2KQU; 2MOK; 2MT9; 
				2MTB; 2OHH; 2OHI; 2OHJ; 2V5U; 2V5V; 2WC1; 3ESX; 3ESY; 3ESZ; 3F6R; 3F6S; 
				3F90; 3FX2; 3KAP; 3KAQ; 3NLL; 4FX2; 4HEQ; 4NLL; 4NUL; 5FX2; 5K9B; 5LJP; 
				5NLL; 5NUL; 5TGZ; 5ULL; 5V56; 5V57; 5XR8; 5XRA; 5YOB; 5YOC; 5YOE; 5YOG; 
				5ZKP; 6H0C; 6H0D; 6KIF; 6LI0; 6LI1; 6NUL
			
			

			» more

				
	





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