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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00201


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PURL: https://purl.expasy.org/prosite/signature/PS00201

Direct ScanProsite submission
General information about the entry

Entry name [info] FLAVODOXIN
Accession [info] PS00201
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00178

Name and characterization of the entry

Description [info] Flavodoxin signature.
Pattern [info] 
[LIV]-[LIVFY]-[FY]-x-[ST]-{V}-x-[AGC]-x-T-{P}-x(2)-A-{L}-x-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 64 in 64 different sequences
Number of true positive hits 59 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 12
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 92.19 %
Recall (true positives / (true positives + false negatives)) 83.10 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

DFA2_THEVB  (Q8DJ55), DFA3_SYNY3  (P74373), DFA4_NOSS1  (Q8YNW7), 

DFA4_SYNY3  (P72721), DFA5_NOSS1  (Q8Z0C1), DFA6_NOSS1  (Q8YQE2), 
FLAV_AQUAE  (O67866), FLAV_AZOCH  (P23001), FLAV_AZOVI  (P00324), 
FLAV_BUCAI  (P57385), FLAV_BUCAP  (Q8K9N5), FLAV_BUCBP  (Q89AK0), 
FLAV_CHOCR  (P14070), FLAV_CLOBE  (P00322), FLAV_CLOSA  (P18855), 
FLAV_DESDE  (P26492), FLAV_ECO57  (P61951), FLAV_ECOL6  (P61950), 
FLAV_ECOLI  (P61949), FLAV_ENTAG  (P28579), FLAV_HAEIN  (P44562), 
FLAV_KLEPN  (O07026), FLAV_MARSD  (P18086), FLAV_MEGEL  (P00321), 
FLAV_MEGG1  (Q01095), FLAV_NITV2  (P00323), FLAV_NITV9  (P71165), 
FLAV_NOSS1  (P0A3D9), FLAV_NOSSM  (P35707), FLAV_NOSSO  (P0A3E0), 
FLAV_PICP2  (P31158), FLAV_RHOCB  (P52967), FLAV_SALTY  (Q8ZQX1), 
FLAV_SHIFL  (Q83S80), FLAV_SYNE7  (P10340), FLAV_SYNY3  (P27319), 
FLAV_TREPA  (O83895), FLAW_AZOVD  (P52964), FLAW_BACSU  (O34589), 
FLAW_DESDA  (P80312), FLAW_ECO57  (P0ABY6), FLAW_ECOL6  (P0ABY5), 
FLAW_ECOLI  (P0ABY4), FLAW_ENTAG  (P71169), FLAW_KLEOX  (P56268), 
FLAW_KLEPN  (P04668), FLAW_MEGGA  (Q01096), FLAW_SALTI  (P0A1N7), 
FLAW_SALTY  (P0A1N6), FPRA1_CLOAB (Q97K92), FPRA2_CLOAB (Q97GC0), 
FPRA_METTM  (Q50497), FPRA_RHOCB  (D5ARY8), HEMG_ECO57  (P0ACB6), 
HEMG_ECOL6  (P0ACB5), HEMG_ECOLI  (P0ACB4), HEMG_SALTY  (Q9L6L1), 
NQOR_ARCFU  (O29904), NQOR_PSEAE  (Q9I509)
» more

UniProtKB/Swiss-Prot
False negative sequences		 12 sequences 

FLAV_BACSU  (O34737), FLAV_HELPJ  (Q9ZK53), FLAV_HELPY  (O25776), 

FLAV_TRIEI  (O52659), FLDP_PSEAB  (A0A0H2ZDT7), FPRA_METAZ  (B1A7S3), 
FPRA_METJA  (Q58158), FPRA_METTH  (O27404), FPRA_MOOTA  (Q9FDN7), 
FPRA_RHOCA  (P0CY93), PNO_CRYPV   (Q968X7), PNO_EUGGR   (Q94IN5)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

FLAW_AZOCH  (P23002)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			5 sequences
			


			
NQOR_METBF  (Q46B88), PLRX1_ARATH (Q9LJ64), S67A1_MOUSE (Q78KK3), 

			
S67A1_RAT   (Q6AY78), URE1_BRADU  (Q89UG0)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			109 PDB
			


			pdb_00001ag9; pdb_00001ahn; pdb_00001akq; pdb_00001akr; pdb_00001akt; pdb_00001aku; pdb_00001akv; pdb_00001akw; pdb_00001azl; pdb_00001bu5; pdb_00001c7e; pdb_00001c7f; 
			
				pdb_00001czh; pdb_00001czk; pdb_00001czl; pdb_00001czn; pdb_00001czo; pdb_00001czr; pdb_00001czu; pdb_00001d03; pdb_00001d04; pdb_00001dx9; pdb_00001f4p; pdb_00001fla; 
				pdb_00001fld; pdb_00001fln; pdb_00001flv; pdb_00001ftg; pdb_00001fvx; pdb_00001fx1; pdb_00001i1o; pdb_00001j8q; pdb_00001j9e; pdb_00001j9g; pdb_00001obo; pdb_00001obv; 
				pdb_00001ofv; pdb_00001qhe; pdb_00001rcf; pdb_00001wsb; pdb_00001wsw; pdb_00001xt6; pdb_00001xyv; pdb_00001xyy; pdb_00001yob; pdb_00001zwk; pdb_00001zwl; pdb_00002a5l; 
				pdb_00002ark; pdb_00002fax; pdb_00002fcr; pdb_00002fdx; pdb_00002flv; pdb_00002fox; pdb_00002fvx; pdb_00002fx2; pdb_00002fz5; pdb_00002kqu; pdb_00002mok; pdb_00002mt9; 
				pdb_00002mtb; pdb_00002ohh; pdb_00002ohi; pdb_00002ohj; pdb_00002v5u; pdb_00002v5v; pdb_00002wc1; pdb_00003esx; pdb_00003esy; pdb_00003esz; pdb_00003f6r; pdb_00003f6s; 
				pdb_00003f90; pdb_00003fx2; pdb_00003kap; pdb_00003kaq; pdb_00003nll; pdb_00004fx2; pdb_00004heq; pdb_00004nll; pdb_00004nul; pdb_00005fx2; pdb_00005k9b; pdb_00005ljp; 
				pdb_00005nll; pdb_00005nul; pdb_00005tgz; pdb_00005ull; pdb_00005v56; pdb_00005v57; pdb_00005xr8; pdb_00005xra; pdb_00005yob; pdb_00005yoc; pdb_00005yoe; pdb_00005yog; 
				pdb_00006h0c; pdb_00006h0d; pdb_00006kif; pdb_00006li0; pdb_00006li1; pdb_00006nul; pdb_00007ddz; pdb_00007epe; pdb_00007epf; pdb_00007k15; pdb_00007v3z; pdb_00008hgq; 
				pdb_00008hgr
			
			

			» more