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PROSITE entry PS00202


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General information about the entry

Entry name [info] RUBREDOXIN
Accession [info] PS00202
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00179

Name and characterization of the entry

Description [info] Rubredoxin signature.
Pattern [info] 
[LIVM]-x-{G}-{R}-W-x-C-P-x-C-[AGD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 51 in 48 different sequences
Number of true positive hits 48 in 45 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.12 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron at position 7
Site [info] iron at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 45 sequences 

ATG35_KOMPG (C4QVX6), HRB_MOOTA   (Q9FDN6), HUPJ_RHOCA  (Q03009), 

RUBH_METTH  (Q50533), RUBL_BRADU  (P48344), RUBL_RHILV  (P28151), 
RUBR1_ALCBS (Q0VTA9), RUBR1_DESDA (P04170), RUBR1_PSEAE (Q9HTK7), 
RUBR1_PSEOL (P12692), RUBR1_PSEPU (Q9WWW4), RUBR2_ALCBS (Q0VKZ2), 
RUBR2_CHLTE (P58993), RUBR2_CLOPE (P14072), RUBR2_DESDA (Q93PP8), 
RUBR2_PSEAE (Q9HTK8), RUBR2_PSEOL (P00272), RUBR2_PSEPU (Q9WWW5), 
RUBR2_RHOER (Q9AE63), RUBR3_CHLTE (P58025), RUBR3_RHOER (P0A4E8), 
RUBR3_RHOSQ (P0A4E9), RUBR4_RHOER (P0A4F0), RUBR4_RHOSQ (P0A4F1), 
RUBR_ACESD  (P23474), RUBR_ACIAD  (P42453), RUBR_AZOCH  (P48343), 
RUBR_AZOVI  (P30778), RUBR_BUTME  (P14071), RUBR_CHLTI  (P09947), 
RUBR_CLOAB  (Q9AL94), RUBR_CLOPA  (P00268), RUBR_CUPNH  (P31912), 
RUBR_DESVH  (P00269), RUBR_DESVM  (P15412), RUBR_HELMO  (P56263), 
RUBR_MEGEL  (P00271), RUBR_MEGGA  (P00270), RUBR_METTH  (O26258), 
RUBR_PEPAS  (P00267), RUBR_PYRAB  (Q9V099), RUBR_PYRFU  (P24297), 
RUBR_SYNY3  (P73068), RUBR_THETC  (P19500), RUBR_TREPA  (O83956)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RUBR1_CHLTE (P58992), RUBR1_CLOPE (Q8XMB2), RUBR1_METJA (Q58145), 

RUBR2_METJA (Q58150), RUBR_NOSS1  (Q9WWN1), RUBR_TRIV2  (Q9XBL8)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

DHX34_HUMAN (Q14147), DHX34_MOUSE (Q9DBV3), STX19_BOVIN (Q0VCI2)


				
	

	

		PDB
[Detailed view]		
		
			92 PDB
			


			1B13; 1B2J; 1B2O; 1BFY; 1BQ8; 1BQ9; 1BRF; 1C09; 1CAA; 1CAD; 1E8J; 1FHH; 
			
				1FHM; 1IRN; 1IRO; 1IU5; 1IU6; 1R0F; 1R0G; 1R0H; 1R0I; 1R0J; 1RB9; 1RDG; 
				1RDV; 1RWD; 1S24; 1SMM; 1SMU; 1SMW; 1SPW; 1T9O; 1T9P; 1T9Q; 1VCX; 1YK4; 
				1YK5; 1ZRP; 2DSX; 2KKD; 2PVE; 2PVX; 2PYA; 2QL0; 2RDV; 2V3B; 3KYU; 3KYV; 
				3KYW; 3KYX; 3KYY; 3RYG; 3RZ6; 3RZT; 3SS2; 4AR3; 4AR4; 4AR5; 4AR6; 4K9F; 
				4MBS; 4RXN; 4XNV; 4XNW; 5AI2; 5AI3; 5NW3; 5OME; 5RXN; 5UIW; 5VBL; 6AKX; 
				6AKY; 6BD4; 6GPS; 6GPX; 6IIU; 6IIV; 6KNM; 6LI2; 6LN2; 6ME6; 6ME7; 6ME8; 
				6ME9; 6NW0; 6NW1; 6RXN; 7F1T; 7RXN; 7SUS; 8RXN
			
			

			» more