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Entry: PS00202 |
Entry name [info] | RUBREDOXIN |
Accession [info] | PS00202 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00179 |
Description [info] | Rubredoxin signature. |
Pattern [info] |
[LIVM]-x-{G}-{R}-W-x-C-P-x-C-[AGD]. |
Total number of hits | 51 in 48 different sequences |
Number of true positive hits | 48 in 45 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 6 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 94.12 % |
Recall (true positives / (true positives + false negatives)) | 88.89 % |
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Site [info] | iron at position 7 |
Site [info] | iron at position 10 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
45 sequences
ATG35_KOMPG (C4QVX6 ), HRB_MOOTA (Q9FDN6 ), HUPJ_RHOCA (Q03009 ), RUBH_METTH (Q50533 ), RUBL_BRADU (P48344 ), RUBL_RHILV (P28151 ), RUBR1_ALCBS (Q0VTA9 ), RUBR1_DESDA (P04170 ), RUBR1_PSEAE (Q9HTK7 ), RUBR1_PSEOL (P12692 ), RUBR1_PSEPU (Q9WWW4 ), RUBR2_ALCBS (Q0VKZ2 ), RUBR2_CHLTE (P58993 ), RUBR2_CLOPE (P14072 ), RUBR2_DESDA (Q93PP8 ), RUBR2_PSEAE (Q9HTK8 ), RUBR2_PSEOL (P00272 ), RUBR2_PSEPU (Q9WWW5 ), RUBR2_RHOER (Q9AE63 ), RUBR3_CHLTE (P58025 ), RUBR3_RHOER (P0A4E8 ), RUBR3_RHOSQ (P0A4E9 ), RUBR4_RHOER (P0A4F0 ), RUBR4_RHOSQ (P0A4F1 ), RUBR_ACESD (P23474 ), RUBR_ACIAD (P42453 ), RUBR_AZOCH (P48343 ), RUBR_AZOVI (P30778 ), RUBR_BUTME (P14071 ), RUBR_CHLTI (P09947 ), RUBR_CLOAB (Q9AL94 ), RUBR_CLOPA (P00268 ), RUBR_CUPNH (P31912 ), RUBR_DESGI (P00270 ), RUBR_DESVH (P00269 ), RUBR_DESVM (P15412 ), RUBR_HELMO (P56263 ), RUBR_MEGEL (P00271 ), RUBR_METTH (O26258 ), RUBR_PEPAS (P00267 ), RUBR_PYRAB (Q9V099 ), RUBR_PYRFU (P24297 ), RUBR_SYNY3 (P73068 ), RUBR_THETC (P19500 ), RUBR_TREPA (O83956 )» more
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UniProtKB/Swiss-Prot False negative sequences |
6 sequences
RUBR1_CHLTE (P58992 ), RUBR1_CLOPE (Q8XMB2 ), RUBR1_METJA (Q58145 ), RUBR2_METJA (Q58150 ), RUBR_NOSS1 (Q9WWN1 ), RUBR_TRIV2 (Q9XBL8 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
DHX34_HUMAN (Q14147 ), DHX34_MOUSE (Q9DBV3 ), STX19_BOVIN (Q0VCI2 ) |
PDB [Detailed view] |
90 PDB
1B13; 1B2J; 1B2O; 1BFY; 1BQ8; 1BQ9; 1BRF; 1C09; 1CAA; 1CAD; 1E8J; 1FHH; 1FHM; 1IRN; 1IRO; 1IU5; 1IU6; 1R0F; 1R0G; 1R0H; 1R0I; 1R0J; 1RB9; 1RDG; 1RDV; 1RWD; 1S24; 1SMM; 1SMU; 1SMW; 1SPW; 1T9O; 1T9P; 1T9Q; 1VCX; 1YK4; 1YK5; 1ZRP; 2DSX; 2KKD; 2PVE; 2PVX; 2PYA; 2QL0; 2RDV; 2V3B; 3KYU; 3KYV; 3KYW; 3KYX; 3KYY; 3RYG; 3RZ6; 3RZT; 3SS2; 4AR3; 4AR4; 4AR5; 4AR6; 4K9F; 4MBS; 4RXN; 4XNV; 4XNW; 5AI2; 5AI3; 5NW3; 5OME; 5RXN; 5UIW; 5VBL; 6AKX; 6AKY; 6BD4; 6GPS; 6GPX; 6IIU; 6IIV; 6KNM; 6LI2; 6LN2; 6ME6; 6ME7; 6ME8; 6ME9; 6NW0; 6NW1; 6RXN; 7RXN; 8RXN » more |