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PROSITE entry PS00218


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General information about the entry

Entry name [info] AMINO_ACID_PERMEASE_1
Accession [info] PS00218
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-JUL-1999 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00191

Name and characterization of the entry

Description [info] Amino acid permeases signature.
Pattern [info] 
[STAGC]-G-[PAG]-x(2,3)-[LIVMFYWA](2)-x-[LIVMFYW]-x-[LIVMFWSTAGC](2)-
[STAGC]-x(3)-[LIVMFYWT]-x-[LIVMST]-x(3)-[LIVMCTA]-[GA]-E-x(5)-[PSAL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 94 in 94 different sequences
Number of true positive hits 93 in 93 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 39
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.94 %
Recall (true positives / (true positives + false negatives)) 70.45 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 93 sequences 

AAP1_SCHPO  (Q92367), AAP2_NEUCR  (O59942), AAPA_BACSU  (O06005), 

AAPT1_MACPH (P0DTN6), AAT1_SCHPO  (Q9P5N2), AGP1_SACU7  (Q876K6), 
AGP1_YEAS7  (A6ZTG5), AGP1_YEAST  (P25376), AGP2_YEAST  (P38090), 
AGP3_YEAST  (P43548), ALP1_YEAST  (P38971), ANSP1_MYCBO (Q7VEQ4), 
ANSP1_MYCTO (P9WQM8), ANSP1_MYCTU (P9WQM9), ANSP2_MYCBO (P0A4W1), 
ANSP2_MYCTO (P9WQM6), ANSP2_MYCTU (P9WQM7), ANSP_ECOLI  (P77610), 
ANSP_SALTY  (P40812), ANSP_STRCO  (Q9X7P0), AROP_CORGL  (Q46065), 
AROP_ECO57  (Q8X968), AROP_ECOL6  (Q8FL49), AROP_ECOLI  (P15993), 
AROP_SALTI  (P0A188), AROP_SALTS  (E1W822), AROP_SALTY  (P0CK99), 
AROP_SHIFL  (P59737), BAP2_YEAST  (P38084), BAP3_YEAST  (P41815), 
BAUD_PSEAE  (Q9I703), CAN1_CANAL  (A0A1D8PPI5), CAN1_CANAW  (P43059), 
CAN1_CANGA  (Q6FNY1), CAN1_YEAST  (P04817), CAN2_CANAL  (Q59WU0), 
CAN3_CANAL  (A0A1D8PPG4), CAT1_SCHPO  (Q9URZ4), CYCA_ECO57  (P0AAE1), 
CYCA_ECOL6  (A0A0H2VDI7), CYCA_ECOLI  (P0AAE0), DIP5_YEAST  (P53388), 
GABP_BACSU  (P46349), GABP_ECOLI  (P25527), GAP1_CANAL  (Q5AG77), 
GAP1_YEAST  (P19145), GAP2_CANAL  (A0A1D8PK89), GAP3_CANAL  (A0A1D8PN88), 
GAP4_CANAL  (Q59WB3), GAP5_CANAL  (A0A1D8PMB1), GNP1_YEAST  (P48813), 
HIP1_YEAST  (P06775), HISP_LACLM  (A2RI97), HNM1_YEAST  (P19807), 
HUTM_BACSU  (P42087), INDA1_HYPAT (P34054), ISP5_SCHPO  (P40901), 
LYP1_YEAST  (P32487), LYSP_ECOLI  (P25737), MEU22_SCHPO (O60170), 
MMUP_ECOLI  (Q47689), PHEP_ECOLI  (P24207), PROY_ECO57  (P0AAE4), 
PROY_ECOL6  (P0AAE3), PROY_ECOLI  (P0AAE2), PROY_SALTY  (P37460), 
PUT4_SCHPO  (Q9URZ3), PUT4_YEAST  (P15380), PUTX_EMENI  (P18696), 
ROCC_BACSU  (P39636), ROCE_BACSU  (P39137), SAM3_YEAST  (Q08986), 
SERP2_LACLM (A2RI86), TAT1_YEAST  (P38085), TAT2_YEAST  (P38967), 
TPO5_YEAST  (P36029), UGA4_YEAST  (P32837), YAO8_SCHPO  (Q10087), 
YBGF_BACSU  (O31462), YBXG_BACSU  (P54425), YCV4_SCHPO  (O74543), 
YDGF_BACSU  (P96704), YG64_SCHPO  (O60113), YH81_SCHPO  (Q9P5N4), 
YHE1_SCHPO  (Q9HDV2), YI26_SCHPO  (Q9P768), YIFK_ECOLI  (P27837), 
YIFK_SALTI  (P0A190), YIFK_SALTY  (P0A189), YP51_SCHPO  (B5BP45), 
YPEV_LACDL  (P45495), YQD2_SCHPO  (Q9C0V0), YTNA_BACSU  (O34618)
» more

UniProtKB/Swiss-Prot
False negative sequences		 39 sequences 

ACAP_LACLM  (A2RL65), AGUD_LACLA  (Q9CEY5), FYWP_LACLM  (A2RMP5), 

GPT1_CANAX  (O74248), LYSP_LACLM  (A2RNZ6), MMP1_YEAST  (Q12372), 
PLAP_ECO57  (P0AA48), PLAP_ECOLI  (P0AA47), PUUP_ECOLI  (P76037), 
SERP1_LACLM (A2RI87), SSY1_YEAST  (Q03770), STET_BACSU  (O34739), 
THI9_SCHPO  (Q9UT18), Y093_RHIME  (O87394), Y1691_LEGPH (P37034), 
Y1979_MYCTO (P9WQM4), Y1979_MYCTU (P9WQM5), Y1999_MYCTO (P9WQM2), 
Y1999_MYCTU (P9WQM3), Y2001_MYCBO (Q7TZ67), Y2022_MYCBO (P63350), 
YBAT_ECOLI  (P77400), YC9D_SCHPO  (Q09887), YCGH_BACSU  (P94383), 
YCQ4_SCHPO  (O74537), YCT3_SCHPO  (O59813), YCUB_SCHPO  (O59831), 
YECA_BACSU  (O34560), YFZ1_SCHPO  (Q9US40), YKAA_CAEEL  (P34261), 
YLAT1_HUMAN (Q9UM01), YLAT1_MOUSE (Q9Z1K8), YLAT1_RAT   (Q9R0S5), 
YLAT2_DANRE (Q59I64), YLAT2_HUMAN (Q92536), YLAT2_MOUSE (Q8BGK6), 
YLAT2_XENLA (A1L3M3), YLAT2_XENTR (Q28I80), YVBW_BACSU  (O32257)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

PLAP_KLEPN  (P37103)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
FAM3B_HUMAN (P58499)