PROSITE logo

PROSITE entry PS00218


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] AMINO_ACID_PERMEASE_1
Accession [info] PS00218
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-JUL-1999 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00191

Name and characterization of the entry

Description [info] Amino acid permeases signature.
Pattern [info]
[STAGC]-G-[PAG]-x(2,3)-[LIVMFYWA](2)-x-[LIVMFYW]-x-[LIVMFWSTAGC](2)-
[STAGC]-x(3)-[LIVMFYWT]-x-[LIVMST]-x(3)-[LIVMCTA]-[GA]-E-x(5)-[PSAL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 94 in 94 different sequences
Number of true positive hits 93 in 93 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 39
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.94 %
Recall (true positives / (true positives + false negatives)) 70.45 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
93 sequences

AAP1_SCHPO  (Q92367), AAP2_NEUCR  (O59942), AAPA_BACSU  (O06005), 
AAPT1_MACPH (P0DTN6), AAT1_SCHPO  (Q9P5N2), AGP1_SACU7  (Q876K6), 
AGP1_YEAS7  (A6ZTG5), AGP1_YEAST  (P25376), AGP2_YEAST  (P38090), 
AGP3_YEAST  (P43548), ALP1_YEAST  (P38971), ANSP1_MYCBO (Q7VEQ4), 
ANSP1_MYCTO (P9WQM8), ANSP1_MYCTU (P9WQM9), ANSP2_MYCBO (P0A4W1), 
ANSP2_MYCTO (P9WQM6), ANSP2_MYCTU (P9WQM7), ANSP_ECOLI  (P77610), 
ANSP_SALTY  (P40812), ANSP_STRCO  (Q9X7P0), AROP_CORGL  (Q46065), 
AROP_ECO57  (Q8X968), AROP_ECOL6  (Q8FL49), AROP_ECOLI  (P15993), 
AROP_SALTI  (P0A188), AROP_SALTS  (E1W822), AROP_SALTY  (P0CK99), 
AROP_SHIFL  (P59737), BAP2_YEAST  (P38084), BAP3_YEAST  (P41815), 
BAUD_PSEAE  (Q9I703), CAN1_CANAL  (A0A1D8PPI5), CAN1_CANAW  (P43059), 
CAN1_CANGA  (Q6FNY1), CAN1_YEAST  (P04817), CAN2_CANAL  (Q59WU0), 
CAN3_CANAL  (A0A1D8PPG4), CAT1_SCHPO  (Q9URZ4), CYCA_ECO57  (P0AAE1), 
CYCA_ECOL6  (A0A0H2VDI7), CYCA_ECOLI  (P0AAE0), DIP5_YEAST  (P53388), 
GABP_BACSU  (P46349), GABP_ECOLI  (P25527), GAP1_CANAL  (Q5AG77), 
GAP1_YEAST  (P19145), GAP2_CANAL  (A0A1D8PK89), GAP3_CANAL  (A0A1D8PN88), 
GAP4_CANAL  (Q59WB3), GAP5_CANAL  (A0A1D8PMB1), GNP1_YEAST  (P48813), 
HIP1_YEAST  (P06775), HISP_LACLM  (A2RI97), HNM1_YEAST  (P19807), 
HUTM_BACSU  (P42087), INDA1_HYPAT (P34054), ISP5_SCHPO  (P40901), 
LYP1_YEAST  (P32487), LYSP_ECOLI  (P25737), MEU22_SCHPO (O60170), 
MMUP_ECOLI  (Q47689), PHEP_ECOLI  (P24207), PROY_ECO57  (P0AAE4), 
PROY_ECOL6  (P0AAE3), PROY_ECOLI  (P0AAE2), PROY_SALTY  (P37460), 
PUT4_SCHPO  (Q9URZ3), PUT4_YEAST  (P15380), PUTX_EMENI  (P18696), 
ROCC_BACSU  (P39636), ROCE_BACSU  (P39137), SAM3_YEAST  (Q08986), 
SERP2_LACLM (A2RI86), TAT1_YEAST  (P38085), TAT2_YEAST  (P38967), 
TPO5_YEAST  (P36029), UGA4_YEAST  (P32837), YAO8_SCHPO  (Q10087), 
YBGF_BACSU  (O31462), YBXG_BACSU  (P54425), YCV4_SCHPO  (O74543), 
YDGF_BACSU  (P96704), YG64_SCHPO  (O60113), YH81_SCHPO  (Q9P5N4), 
YHE1_SCHPO  (Q9HDV2), YI26_SCHPO  (Q9P768), YIFK_ECOLI  (P27837), 
YIFK_SALTI  (P0A190), YIFK_SALTY  (P0A189), YP51_SCHPO  (B5BP45), 
YPEV_LACDL  (P45495), YQD2_SCHPO  (Q9C0V0), YTNA_BACSU  (O34618)
» more

UniProtKB/Swiss-Prot
False negative sequences
39 sequences

ACAP_LACLM  (A2RL65), AGUD_LACLA  (Q9CEY5), FYWP_LACLM  (A2RMP5), 
GPT1_CANAX  (O74248), LYSP_LACLM  (A2RNZ6), MMP1_YEAST  (Q12372), 
PLAP_ECO57  (P0AA48), PLAP_ECOLI  (P0AA47), PUUP_ECOLI  (P76037), 
SERP1_LACLM (A2RI87), SSY1_YEAST  (Q03770), STET_BACSU  (O34739), 
THI9_SCHPO  (Q9UT18), Y093_RHIME  (O87394), Y1691_LEGPH (P37034), 
Y1979_MYCTO (P9WQM4), Y1979_MYCTU (P9WQM5), Y1999_MYCTO (P9WQM2), 
Y1999_MYCTU (P9WQM3), Y2001_MYCBO (Q7TZ67), Y2022_MYCBO (P63350), 
YBAT_ECOLI  (P77400), YC9D_SCHPO  (Q09887), YCGH_BACSU  (P94383), 
YCQ4_SCHPO  (O74537), YCT3_SCHPO  (O59813), YCUB_SCHPO  (O59831), 
YECA_BACSU  (O34560), YFZ1_SCHPO  (Q9US40), YKAA_CAEEL  (P34261), 
YLAT1_HUMAN (Q9UM01), YLAT1_MOUSE (Q9Z1K8), YLAT1_RAT   (Q9R0S5), 
YLAT2_DANRE (Q59I64), YLAT2_HUMAN (Q92536), YLAT2_MOUSE (Q8BGK6), 
YLAT2_XENLA (A1L3M3), YLAT2_XENTR (Q28I80), YVBW_BACSU  (O32257)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PLAP_KLEPN  (P37103)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

FAM3B_HUMAN (P58499)