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Entry: PS00243

General information about the entry

Entry name [info] INTEGRIN_BETA
Accession [info] PS00243
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
18-SEP-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00216

Name and characterization of the entry

Description [info] Integrins beta chain cysteine-rich domain signature.
Pattern [info] 
C-x-[GNQ]-x(1,3)-G-x-C-x-C-x(2)-C-x-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_08 which contains 560'823 sequence entries.


Total number of hits 152 in 50 different sequences
Number of true positive hits 152 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 10
Site [info] disulfide(?) at position 1
Site [info] disulfide(?) at position 7
Site [info] disulfide(?) at position 9
Site [info] disulfide(?) at position 11
Site [info] disulfide(?) at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 50 sequences 

ITB1A_XENLA (P12606    ), ITB1B_XENLA (P12607    ), ITB1_BOVIN  (P53712    ), 

ITB1_CAMBA  (A5Z1X6    ), ITB1_CHICK  (P07228    ), ITB1_FELCA  (P53713    ), 
ITB1_HUMAN  (P05556    ), ITB1_MOUSE  (P09055    ), ITB1_PIG    (Q9GLP0    ), 
ITB1_PONAB  (Q5RCA9    ), ITB1_RAT    (P49134    ), ITB1_SHEEP  (B0FYY4    ), 
ITB2L_MOUSE (Q3UV74    ), ITB2_BOVIN  (P32592    ), ITB2_CAPHI  (Q5VI41    ), 
ITB2_HUMAN  (P05107    ), ITB2_MOUSE  (P11835    ), ITB2_OVICA  (Q2VJ42    ), 
ITB2_PIG    (P53714    ), ITB2_SHEEP  (Q6ECI6    ), ITB3_HUMAN  (P05106    ), 
ITB3_MOUSE  (O54890    ), ITB3_RAT    (Q8R2H2    ), ITB4_HUMAN  (P16144    ), 
ITB4_MOUSE  (A2A863    ), ITB4_RAT    (Q64632    ), ITB5_BOVIN  (P80747    ), 
ITB5_HUMAN  (P18084    ), ITB5_MOUSE  (O70309    ), ITB5_PAPCY  (Q07441    ), 
ITB6_BOVIN  (Q8SQB8    ), ITB6_CAVPO  (P18563    ), ITB6_HUMAN  (P18564    ), 
ITB6_MOUSE  (Q9Z0T9    ), ITB6_PIG    (Q1RPR6    ), ITB6_RAT    (Q6AYF4    ), 
ITB6_SHEEP  (Q863C4    ), ITB7_HUMAN  (P26010    ), ITB7_MOUSE  (P26011    ), 
ITB8_HUMAN  (P26012    ), ITB8_MOUSE  (Q0VBD0    ), ITB8_RABIT  (P26013    ), 
ITBL_CAEEL  (Q9GYK2    ), ITBN_DROME  (Q27591    ), ITBX_DROME  (P11584    ), 
ITGBL_HUMAN (O95965    ), ITGBL_MOUSE (Q8VDV0    ), ITGBL_RAT   (Q5PQQ8    ), 
ITGBL_XENLA (Q5M9B3    ), PAT3_CAEEL  (Q27874    )
» more

PDB
[Detailed view]		 30 PDB

1JV2; 1L3Y; 1L5G; 1M1X; 1U8C; 2P26; 2P28; 3FCS; 3IJE; 3K6S; 3K71; 3K72; 4CAK; 4G1E; 4G1M; 4MMX; 4MMY; 4MMZ; 4NEH; 4NEN; 4O02; 5E6W; 5E6X; 5ES4; 6AVQ; 6AVR; 6BXB; 6BXF; 6BXJ; 6CKB
» more

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