PROSITE logo

PROSITE entry PS00243


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] INTEGRIN_BETA
Accession [info] PS00243
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00216

Name and characterization of the entry

Description [info] Integrins beta chain cysteine-rich domain signature.
Pattern [info]
C-x-[GNQ]-x(1,3)-G-x-C-x-C-x(2)-C-x-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 155 in 51 different sequences
Number of true positive hits 154 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.35 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 10
Site [info] disulfide(?) at position 1
Site [info] disulfide(?) at position 7
Site [info] disulfide(?) at position 9
Site [info] disulfide(?) at position 11
Site [info] disulfide(?) at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
50 sequences

ITB1A_XENLA (P12606), ITB1B_XENLA (P12607), ITB1_BOVIN  (P53712), 
ITB1_CAMBA  (A5Z1X6), ITB1_CHICK  (P07228), ITB1_FELCA  (P53713), 
ITB1_HUMAN  (P05556), ITB1_MOUSE  (P09055), ITB1_PIG(Q9GLP0), 
ITB1_PONAB  (Q5RCA9), ITB1_RAT(P49134), ITB1_SHEEP  (B0FYY4), 
ITB2L_MOUSE (Q3UV74), ITB2_BOVIN  (P32592), ITB2_CAPHI  (Q5VI41), 
ITB2_HUMAN  (P05107), ITB2_MOUSE  (P11835), ITB2_OVICA  (Q2VJ42), 
ITB2_PIG(P53714), ITB2_SHEEP  (Q6ECI6), ITB3_HUMAN  (P05106), 
ITB3_MOUSE  (O54890), ITB3_RAT(Q8R2H2), ITB4_HUMAN  (P16144), 
ITB4_MOUSE  (A2A863), ITB4_RAT(Q64632), ITB5_BOVIN  (P80747), 
ITB5_HUMAN  (P18084), ITB5_MOUSE  (O70309), ITB5_PAPCY  (Q07441), 
ITB6_BOVIN  (Q8SQB8), ITB6_CAVPO  (P18563), ITB6_HUMAN  (P18564), 
ITB6_MOUSE  (Q9Z0T9), ITB6_PIG(Q1RPR6), ITB6_RAT(Q6AYF4), 
ITB6_SHEEP  (Q863C4), ITB7_HUMAN  (P26010), ITB7_MOUSE  (P26011), 
ITB8_HUMAN  (P26012), ITB8_MOUSE  (Q0VBD0), ITB8_RABIT  (P26013), 
ITBL_CAEEL  (Q9GYK2), ITBN_DROME  (Q27591), ITBX_DROME  (P11584), 
ITGBL_HUMAN (O95965), ITGBL_MOUSE (Q8VDV0), ITGBL_RAT   (Q5PQQ8), 
ITGBL_XENLA (Q5M9B3), PAT3_CAEEL  (Q27874)
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

C30_CONCL   (P0DTX8)

		
PDB
[Detailed view]
50 PDB

1JV2; 1L3Y; 1L5G; 1M1X; 1U8C; 2P26; 2P28; 3FCS; 3IJE; 3K6S; 3K71; 3K72; 4CAK; 4G1E; 4G1M; 4MMX; 4MMY; 4MMZ; 4NEH; 4NEN; 4O02; 4UM8; 5E6W; 5E6X; 5ES4; 6AVQ; 6AVR; 6AVU; 6BXB; 6BXF; 6BXJ; 6CKB; 6DJP; 6MK0; 6MSL; 6MSU; 6NAJ; 6UJA; 6UJB; 6UJC; 6V4P; 7LA4; 7NWL; 7NXD; 7USL; 7USM; 8GCD; 8GCE; 8T2U; 8T2V
» more